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The map label for this gene is ybjT [H]

Identifier: 148260665

GI number: 148260665

Start: 1842881

End: 1843831

Strand: Reverse

Name: ybjT [H]

Synonym: Acry_1668

Alternate gene names: 148260665

Gene position: 1843831-1842881 (Counterclockwise)

Preceding gene: 148260683

Following gene: 148260664

Centisome position: 54.4

GC content: 70.66

Gene sequence:

>951_bases
ATGGCATCGCGCAAGGTTGCAACGGTTTTCGGCGCATCCGGCTTCATTGGCCGCCATGTCGTGAAACGCCTGGCCGCCGC
GGGCTGGGTGGTGCGCGCGGCGATGCGCGATACCGAGGCCGGCGCCTTTCTCCGCCCGCTTGGCGATGTCGGCCAGATCG
TGCCGCTCTATGCTCCGCTCGACAACGAGGCGGCGTTGCGCCGCGCGATCGAGGGGGCGACCTGCGTCATCAATCTCGTG
GGAATCCTGGCCGAACGGCGGCGCGGCGATTTCGACCGGGTGCAGCACCAGGGGGCGGCGAGAATCGCGACGCTCGCGGC
GGAGGCGGGGGTGCGCGCGCTCGTGCACGTCTCGGCGATCGGCGCCGATCCGAAGGCGGCGAGCCAGTATGCTCGGAGCA
AGGGGCTGGGCGAGGCGGCGGTGCGGGCGGCCTTTCCTGCGGCGACGATCCTGCGCCCCTCGATCGTGTTCGGGCCGGAG
GACGGGTTCTTCAACCGCTTCGGCGCGATGGCGGCGCAACTGCCGTTCCTGCCGGTGATCGAGGGCGAGACGAAATTCCA
GCCGGTGTATGTCGGCGACGTCGCCGATGCGGTGATGGCGGCGATCGACCGGCCCGAACTCGCCGGCGCAACCTACGAGC
TCGGCGGCCCCGAAGTGCGGAGCTTCCGCGACCTGCTGGCCTATATCAACGCGGAAACCGGCCATCACCGCGCCCTGATC
GGCGTGCCGCGCTGGGCCGCCTGGTTGCAGGCTTCGGTGCTCCAGCGCCTGCCCGGACGGTTGCTGACGACCGATCAGCT
CCTGCTGCTCCGGCGCGACAACGTGGTCGCGCGGAACGCGCGGACGCTGGCCGATCTCGGCATCGTCGCGACGCCGATCG
ACCTTGTCGTCCCCTCCTACATGCGGCGCTACCGGCATGGCGGCGGGCGTCCGACTGGCGGCGAAGCGTGA

Upstream 100 bases:

>100_bases
CGAAGCGGCGCCCTGCCGTCAATCCGCCTTCGTGCGGGAGGCGGTTGTCTTGCGCGGGCCAGTCATGCGAACAGAAGGCA
CCCATCAAAAGGAGACCCTC

Downstream 100 bases:

>100_bases
TAGGTCTCAAACGGGACATAATTTTCTGTCACAAAACCGCGGTGACGAGGGCGCAGAGCTGGTAATCGAGCATATATGGC
AGTTGATATGACTTAACATC

Product: NADH dehydrogenase (ubiquinone)

Products: NAD+; ubiquinol

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 315

Protein sequence:

>316_residues
MASRKVATVFGASGFIGRHVVKRLAAAGWVVRAAMRDTEAGAFLRPLGDVGQIVPLYAPLDNEAALRRAIEGATCVINLV
GILAERRRGDFDRVQHQGAARIATLAAEAGVRALVHVSAIGADPKAASQYARSKGLGEAAVRAAFPAATILRPSIVFGPE
DGFFNRFGAMAAQLPFLPVIEGETKFQPVYVGDVADAVMAAIDRPELAGATYELGGPEVRSFRDLLAYINAETGHHRALI
GVPRWAAWLQASVLQRLPGRLLTTDQLLLLRRDNVVARNARTLADLGIVATPIDLVVPSYMRRYRHGGGRPTGGEA

Sequences:

>Translated_316_residues
MASRKVATVFGASGFIGRHVVKRLAAAGWVVRAAMRDTEAGAFLRPLGDVGQIVPLYAPLDNEAALRRAIEGATCVINLV
GILAERRRGDFDRVQHQGAARIATLAAEAGVRALVHVSAIGADPKAASQYARSKGLGEAAVRAAFPAATILRPSIVFGPE
DGFFNRFGAMAAQLPFLPVIEGETKFQPVYVGDVADAVMAAIDRPELAGATYELGGPEVRSFRDLLAYINAETGHHRALI
GVPRWAAWLQASVLQRLPGRLLTTDQLLLLRRDNVVARNARTLADLGIVATPIDLVVPSYMRRYRHGGGRPTGGEA
>Mature_315_residues
ASRKVATVFGASGFIGRHVVKRLAAAGWVVRAAMRDTEAGAFLRPLGDVGQIVPLYAPLDNEAALRRAIEGATCVINLVG
ILAERRRGDFDRVQHQGAARIATLAAEAGVRALVHVSAIGADPKAASQYARSKGLGEAAVRAAFPAATILRPSIVFGPED
GFFNRFGAMAAQLPFLPVIEGETKFQPVYVGDVADAVMAAIDRPELAGATYELGGPEVRSFRDLLAYINAETGHHRALIG
VPRWAAWLQASVLQRLPGRLLTTDQLLLLRRDNVVARNARTLADLGIVATPIDLVVPSYMRRYRHGGGRPTGGEA

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI6681764, Length=303, Percent_Identity=36.3036303630363, Blast_Score=164, Evalue=1e-40,
Organism=Escherichia coli, GI87081793, Length=254, Percent_Identity=27.9527559055118, Blast_Score=83, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17556106, Length=314, Percent_Identity=32.8025477707006, Blast_Score=149, Evalue=2e-36,
Organism=Drosophila melanogaster, GI24667554, Length=321, Percent_Identity=33.6448598130841, Blast_Score=149, Evalue=3e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021295
- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF11066 DUF2867; PF01370 Epimerase [H]

EC number: 1.6.5.3; 1.6.99.3

Molecular weight: Translated: 33727; Mature: 33596

Theoretical pI: Translated: 10.50; Mature: 10.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASRKVATVFGASGFIGRHVVKRLAAAGWVVRAAMRDTEAGAFLRPLGDVGQIVPLYAPL
CCCCCEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCHHHCCCEEEEECCC
DNEAALRRAIEGATCVINLVGILAERRRGDFDRVQHQGAARIATLAAEAGVRALVHVSAI
CCHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC
GADPKAASQYARSKGLGEAAVRAAFPAATILRPSIVFGPEDGFFNRFGAMAAQLPFLPVI
CCCHHHHHHHHHHCCCCHHHHHHHCCHHHHHCCCEEECCCCCHHHHHHHHHHHCCCCEEE
EGETKFQPVYVGDVADAVMAAIDRPELAGATYELGGPEVRSFRDLLAYINAETGHHRALI
CCCCCCCCEEECHHHHHHHHHHCCCHHCCCEEECCCHHHHHHHHHHHHHCCCCCCCEEEE
GVPRWAAWLQASVLQRLPGRLLTTDQLLLLRRDNVVARNARTLADLGIVATPIDLVVPSY
ECCHHHHHHHHHHHHHCCCCEECCCCEEEEECCCCHHHCCHHHHHHCHHHCHHHHHHHHH
MRRYRHGGGRPTGGEA
HHHHHCCCCCCCCCCC
>Mature Secondary Structure 
ASRKVATVFGASGFIGRHVVKRLAAAGWVVRAAMRDTEAGAFLRPLGDVGQIVPLYAPL
CCCCEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCHHHCCCEEEEECCC
DNEAALRRAIEGATCVINLVGILAERRRGDFDRVQHQGAARIATLAAEAGVRALVHVSAI
CCHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC
GADPKAASQYARSKGLGEAAVRAAFPAATILRPSIVFGPEDGFFNRFGAMAAQLPFLPVI
CCCHHHHHHHHHHCCCCHHHHHHHCCHHHHHCCCEEECCCCCHHHHHHHHHHHCCCCEEE
EGETKFQPVYVGDVADAVMAAIDRPELAGATYELGGPEVRSFRDLLAYINAETGHHRALI
CCCCCCCCEEECHHHHHHHHHHCCCHHCCCEEECCCHHHHHHHHHHHHHCCCCCCCEEEE
GVPRWAAWLQASVLQRLPGRLLTTDQLLLLRRDNVVARNARTLADLGIVATPIDLVVPSY
ECCHHHHHHHHHHHHHCCCCEECCCCEEEEECCCCHHHCCHHHHHHCHHHCHHHHHHHHH
MRRYRHGGGRPTGGEA
HHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADH; H+; ubiquinone

Specific reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]