| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
Click here to switch to the map view.
The map label for this gene is trxB [C]
Identifier: 148260452
GI number: 148260452
Start: 1612238
End: 1613257
Strand: Reverse
Name: trxB [C]
Synonym: Acry_1452
Alternate gene names: 148260452
Gene position: 1613257-1612238 (Counterclockwise)
Preceding gene: 148260458
Following gene: 148260450
Centisome position: 47.6
GC content: 66.37
Gene sequence:
>1020_bases ATGGCAGAGACGATCACCACCGATGTGGCCATTATCGGCGCGGGCCCAGCCGGCCTATTCGCCGTTTTCGAGTGCGGGAT GCTGAAGCTCGGCACCGTGCTGATCGACGCGTTGGGCGAGGTGGGCGGCCAGTGTGCGGCGCTCTATCCGGAAAAGCCGA TCTACGACATTCCCGCCCTGCCGGCGATCGAGGCGGCAGGGTTGATCGAGAATCTGGAGCGGCAGATCGCGCCCTTCGCC GCGCCGCGCCTGCTCGGCCGGCTCGTGACGGCGATTTCCGGCAGTTCGGGCGATTTCACGATCGGCACCGACCTGGGCGA CATCGTCCGCGCGAAGGCCATCATCATCGCAGCCGGTGCGGGGGCATTCGGCCCGAACCGTCCGCCGCTGGAGGGACTCG CCGCCTACGAGGCGAGTGGTGCGGTGCAGTATTACGTGAAGCGGCGCGAGGCGTTGCGCGGCAAGCGGGTGGTGATCGCC GGCGGTGGCGACTCGGCGGTGGACTGGGCGCTGGCGCTGTGCGGGATTGCATCGAGCATCGCCGTGGTCCACCGGCGGCC GAAATTTCGTGCCGCGCCCGAAAGCGCCGCGCAATTGGCCGAAGCGGCGGCGCGGGGCGACATCGACCTCGTCATTCCCT ATCAGTTGCATGCGCTGCATGGCGCCGATGGTGCGCTGCGCACGGTCGAGGTCGCCGATCTCGACGGCGCAACCAGGCAT CTCGAGGCCGATGTGCTGTTGCCGTTCTTCGGTCTCGCCACCGATCTCGGGCCGGTTGCGACCTGGGGGCTTGAGCTTTC GCTTCATCACGTTCTTGTGACCCCCTCGACCTGCGAGACCAGCACGCGCGGCATTTTCGCGATTGGCGACGTTGCGCAGT ATCCGGGCAAACTCAAGCTGATCCTGCAGGGCTTCTCAGAAGCGGCGATGGCGGCTCACGCAATCCATCCGATCGTGCAT CCGGACGAGGCGCTGCATTTCGAGTATTCGACATCGAAAGGTGTGCCGGGCACTGCCTGA
Upstream 100 bases:
>100_bases CGCTGCCTAGCGTCATCTTCCGAATCGCCATGGCGCGATCCTGCCCGATCAGATCGTCTTTGCAAGTTGACCCGCGCGCG GTTTCGGCTAGGCATGGGGC
Downstream 100 bases:
>100_bases GGCCAACCAGTTCACGTCAAAGCGTCCTGACAAACCGCGACCTGCTTCCCGATCCCGGGCATTGGGAGGATTCGCCGATG CGTATCCGCGCTGGACTGGG
Product: FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Products: NA
Alternate protein names: FNR; Fd-NADP+ reductase
Number of amino acids: Translated: 339; Mature: 338
Protein sequence:
>339_residues MAETITTDVAIIGAGPAGLFAVFECGMLKLGTVLIDALGEVGGQCAALYPEKPIYDIPALPAIEAAGLIENLERQIAPFA APRLLGRLVTAISGSSGDFTIGTDLGDIVRAKAIIIAAGAGAFGPNRPPLEGLAAYEASGAVQYYVKRREALRGKRVVIA GGGDSAVDWALALCGIASSIAVVHRRPKFRAAPESAAQLAEAAARGDIDLVIPYQLHALHGADGALRTVEVADLDGATRH LEADVLLPFFGLATDLGPVATWGLELSLHHVLVTPSTCETSTRGIFAIGDVAQYPGKLKLILQGFSEAAMAAHAIHPIVH PDEALHFEYSTSKGVPGTA
Sequences:
>Translated_339_residues MAETITTDVAIIGAGPAGLFAVFECGMLKLGTVLIDALGEVGGQCAALYPEKPIYDIPALPAIEAAGLIENLERQIAPFA APRLLGRLVTAISGSSGDFTIGTDLGDIVRAKAIIIAAGAGAFGPNRPPLEGLAAYEASGAVQYYVKRREALRGKRVVIA GGGDSAVDWALALCGIASSIAVVHRRPKFRAAPESAAQLAEAAARGDIDLVIPYQLHALHGADGALRTVEVADLDGATRH LEADVLLPFFGLATDLGPVATWGLELSLHHVLVTPSTCETSTRGIFAIGDVAQYPGKLKLILQGFSEAAMAAHAIHPIVH PDEALHFEYSTSKGVPGTA >Mature_338_residues AETITTDVAIIGAGPAGLFAVFECGMLKLGTVLIDALGEVGGQCAALYPEKPIYDIPALPAIEAAGLIENLERQIAPFAA PRLLGRLVTAISGSSGDFTIGTDLGDIVRAKAIIIAAGAGAFGPNRPPLEGLAAYEASGAVQYYVKRREALRGKRVVIAG GGDSAVDWALALCGIASSIAVVHRRPKFRAAPESAAQLAEAAARGDIDLVIPYQLHALHGADGALRTVEVADLDGATRHL EADVLLPFFGLATDLGPVATWGLELSLHHVLVTPSTCETSTRGIFAIGDVAQYPGKLKLILQGFSEAAMAAHAIHPIVHP DEALHFEYSTSKGVPGTA
Specific function: Unknown
COG id: COG0492
COG function: function code O; Thioredoxin reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ferredoxin--NADP reductase type 2 family
Homologues:
Organism=Escherichia coli, GI1787114, Length=300, Percent_Identity=26.6666666666667, Blast_Score=71, Evalue=9e-14, Organism=Escherichia coli, GI87081763, Length=210, Percent_Identity=26.1904761904762, Blast_Score=63, Evalue=2e-11,
Paralogues:
None
Copy number: 808 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): FENR_ACICJ (A5FYH8)
Other databases:
- EMBL: CP000697 - RefSeq: YP_001234579.1 - ProteinModelPortal: A5FYH8 - SMR: A5FYH8 - STRING: A5FYH8 - GeneID: 5161852 - GenomeReviews: CP000697_GR - KEGG: acr:Acry_1452 - eggNOG: COG0492 - HOGENOM: HBG669726 - OMA: FQVFELG - ProtClustDB: CLSK936108 - BioCyc: ACRY349163:ACRY_1452-MONOMER - HAMAP: MF_01685 - InterPro: IPR013027 - InterPro: IPR022890 - InterPro: IPR001327 - InterPro: IPR000103 - PRINTS: PR00368 - PRINTS: PR00469
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2
EC number: =1.18.1.2
Molecular weight: Translated: 35090; Mature: 34958
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: BINDING 36-36 BINDING 44-44 BINDING 49-49 BINDING 89-89 BINDING 123-123 BINDING 290-290 BINDING 331-331
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAETITTDVAIIGAGPAGLFAVFECGMLKLGTVLIDALGEVGGQCAALYPEKPIYDIPAL CCCCEEEEEEEEECCHHHHHHHHHHCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCC PAIEAAGLIENLERQIAPFAAPRLLGRLVTAISGSSGDFTIGTDLGDIVRAKAIIIAAGA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHEEEEEEECC GAFGPNRPPLEGLAAYEASGAVQYYVKRREALRGKRVVIAGGGDSAVDWALALCGIASSI CCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHH AVVHRRPKFRAAPESAAQLAEAAARGDIDLVIPYQLHALHGADGALRTVEVADLDGATRH HHHHCCCCCCCCCHHHHHHHHHHHCCCEEEEECEEEEEEECCCCCEEEEEEECCCCCHHH LEADVLLPFFGLATDLGPVATWGLELSLHHVLVTPSTCETSTRGIFAIGDVAQYPGKLKL CCHHHHHHHHHHHHCCCHHHHHCEEEEEEEEEEECCCCCCCCCCEEEECHHHHCCCCEEE ILQGFSEAAMAAHAIHPIVHPDEALHFEYSTSKGVPGTA EHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCC >Mature Secondary Structure AETITTDVAIIGAGPAGLFAVFECGMLKLGTVLIDALGEVGGQCAALYPEKPIYDIPAL CCCEEEEEEEEECCHHHHHHHHHHCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCC PAIEAAGLIENLERQIAPFAAPRLLGRLVTAISGSSGDFTIGTDLGDIVRAKAIIIAAGA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHEEEEEEECC GAFGPNRPPLEGLAAYEASGAVQYYVKRREALRGKRVVIAGGGDSAVDWALALCGIASSI CCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHH AVVHRRPKFRAAPESAAQLAEAAARGDIDLVIPYQLHALHGADGALRTVEVADLDGATRH HHHHCCCCCCCCCHHHHHHHHHHHCCCEEEEECEEEEEEECCCCCEEEEEEECCCCCHHH LEADVLLPFFGLATDLGPVATWGLELSLHHVLVTPSTCETSTRGIFAIGDVAQYPGKLKL CCHHHHHHHHHHHHCCCHHHHHCEEEEEEEEEEECCCCCCCCCCEEEECHHHHCCCCEEE ILQGFSEAAMAAHAIHPIVHPDEALHFEYSTSKGVPGTA EHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA