| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is yyaJ [H]
Identifier: 148260458
GI number: 148260458
Start: 1620912
End: 1622336
Strand: Reverse
Name: yyaJ [H]
Synonym: Acry_1458
Alternate gene names: 148260458
Gene position: 1622336-1620912 (Counterclockwise)
Preceding gene: 148260459
Following gene: 148260452
Centisome position: 47.87
GC content: 64.56
Gene sequence:
>1425_bases GTGAGCCGCCCGCCAGCCGTAGAAACCTCAATTCCTGCCCGGCTCGACCGGCTGGCCTGGGGGCGGTTTCACTGGCTGGT GGTTGTGGCCCTTGGCGTCGCCTGGATACTCGACGGGCTGGAAGTCACGCTGGTGGGCTCGCTATCCGGCGCAATCGCGA AATCGCCGGACATGCAATTGTCCAGCGCCGCTGTCGGTGGCCTGGGCAGCTCTTATGTCGCCGGTGCGGTGCTCGGTGCC CTGCTGTTTGGCTGGTTGACGGACCGGTTGGGGCGCAAGCGTCTCTTCACGGTGACACTGATCGTCTATCTCGCCGGCAC GATCGCTTCCGGCCTTGCCTGGAACTATACCGCGCTGCTTGCCTTCCGCTTCGTGACCGGGATGGGCATCGGCGGCGAAT ACGCGGCGATCAACGCCACCATCCAGGAACTGGTGCCGGCCCGGTTTCGCGGCTTCACCGATCTCGTGATCAATGGCAGT TACTGGATTGGCGCGGCGTTGGGGGCCGCGGGCGCGCTCGCTGCGCTCGACCCGCAACTGGTGCCACCGGCCTATGGCTG GCGTCTTGCCTTCATTCTCGGAGGCTTCCTGGCTGCGACCGCACTGGCCCTGCGACGCCATATTCCTGAAAGTCCGCGCT GGCTGATGACCCATGGACGCCCCTCGGAGGCGGAACAGATCGTCGCTGGCATCGAGTTCCGGTGCGGCCCGGTCATGCCG ACGGAGTCCCTGCCGACCATCCGCCTGCGTACCGATGTCAGCAGCTGGTTCGGCATCGGGCTGCAAGCCCTGCTCGGGCG CTATCGTCGACGCGCCGTGCTCGGCGTGTGCCTGATGACTGCGCAGGCTTTCTGCTACAACGCGATCTTTTTCACATATG CCATTGTTCTTACGAAATTCTATGGCGTGCCGGGTGATCGGGTGGGGATGTTCATCCTGCCCTTCGCACTGGGTAATTTC GCGGGACTGCTGATACTCGGCCGCCTCTTCGATACGGTCGGTCGCCGCACGATGATCACCGCGACCTATGCCACCGCCGG GCTGCTGATGATCGCCACCGGGCTGCTTTTCGTTGGTGCCGATCTTTCCGCGACGGGGCAGACCGCGGCCTGGACGATGA TCTTCTTCTTTGCCTCGACCGCAGCAAGTTCGGCCTATCTGACCGTGAGCGAATGCTTCCCGCTGGAAATCCGGGCGGTC GCCATCGCGCTGTTCTACGCGTTTGGCACCGCTCTGGGCGGAATTGCAGGTCCTCTCCTGTTCGGGATGCTGATAGGCAG TGGCGAGCGGATCAACCTGTTCTACGGGGATCTTCTGGGCGGCCTCCTGATGCTGGGGGCCGCCGCAGTGGAGGCGGCGA TCGGCGTCGAGGCAGCGCGCCGCCCGCTCGAGTCGGTGGCGCGTCCGCTGTCGGAAGTCGATTAA
Upstream 100 bases:
>100_bases CGTCCGTTGCAATATCCCTACTGGCATCAGGCGCAGACCGCGAGGGATCGTCTCGGCCCGGCCGATCTCGCCTTGCTGGG ACCGCATCTCTGAGCGACGT
Downstream 100 bases:
>100_bases CTCAAGCCTGGGCGGGTGCGATCGGGCGCGGACGACCTTCGCTGTCGATCGCGACAAAGGTGAACACCGCCTTCGTCACC CGCCGCTCGCTCGCCGAATC
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 474; Mature: 473
Protein sequence:
>474_residues MSRPPAVETSIPARLDRLAWGRFHWLVVVALGVAWILDGLEVTLVGSLSGAIAKSPDMQLSSAAVGGLGSSYVAGAVLGA LLFGWLTDRLGRKRLFTVTLIVYLAGTIASGLAWNYTALLAFRFVTGMGIGGEYAAINATIQELVPARFRGFTDLVINGS YWIGAALGAAGALAALDPQLVPPAYGWRLAFILGGFLAATALALRRHIPESPRWLMTHGRPSEAEQIVAGIEFRCGPVMP TESLPTIRLRTDVSSWFGIGLQALLGRYRRRAVLGVCLMTAQAFCYNAIFFTYAIVLTKFYGVPGDRVGMFILPFALGNF AGLLILGRLFDTVGRRTMITATYATAGLLMIATGLLFVGADLSATGQTAAWTMIFFFASTAASSAYLTVSECFPLEIRAV AIALFYAFGTALGGIAGPLLFGMLIGSGERINLFYGDLLGGLLMLGAAAVEAAIGVEAARRPLESVARPLSEVD
Sequences:
>Translated_474_residues MSRPPAVETSIPARLDRLAWGRFHWLVVVALGVAWILDGLEVTLVGSLSGAIAKSPDMQLSSAAVGGLGSSYVAGAVLGA LLFGWLTDRLGRKRLFTVTLIVYLAGTIASGLAWNYTALLAFRFVTGMGIGGEYAAINATIQELVPARFRGFTDLVINGS YWIGAALGAAGALAALDPQLVPPAYGWRLAFILGGFLAATALALRRHIPESPRWLMTHGRPSEAEQIVAGIEFRCGPVMP TESLPTIRLRTDVSSWFGIGLQALLGRYRRRAVLGVCLMTAQAFCYNAIFFTYAIVLTKFYGVPGDRVGMFILPFALGNF AGLLILGRLFDTVGRRTMITATYATAGLLMIATGLLFVGADLSATGQTAAWTMIFFFASTAASSAYLTVSECFPLEIRAV AIALFYAFGTALGGIAGPLLFGMLIGSGERINLFYGDLLGGLLMLGAAAVEAAIGVEAARRPLESVARPLSEVD >Mature_473_residues SRPPAVETSIPARLDRLAWGRFHWLVVVALGVAWILDGLEVTLVGSLSGAIAKSPDMQLSSAAVGGLGSSYVAGAVLGAL LFGWLTDRLGRKRLFTVTLIVYLAGTIASGLAWNYTALLAFRFVTGMGIGGEYAAINATIQELVPARFRGFTDLVINGSY WIGAALGAAGALAALDPQLVPPAYGWRLAFILGGFLAATALALRRHIPESPRWLMTHGRPSEAEQIVAGIEFRCGPVMPT ESLPTIRLRTDVSSWFGIGLQALLGRYRRRAVLGVCLMTAQAFCYNAIFFTYAIVLTKFYGVPGDRVGMFILPFALGNFA GLLILGRLFDTVGRRTMITATYATAGLLMIATGLLFVGADLSATGQTAAWTMIFFFASTAASSAYLTVSECFPLEIRAVA IALFYAFGTALGGIAGPLLFGMLIGSGERINLFYGDLLGGLLMLGAAAVEAAIGVEAARRPLESVARPLSEVD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Homo sapiens, GI7662270, Length=226, Percent_Identity=30.0884955752212, Blast_Score=94, Evalue=3e-19, Organism=Homo sapiens, GI216548223, Length=360, Percent_Identity=26.1111111111111, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI302148518, Length=361, Percent_Identity=24.9307479224377, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI166197673, Length=381, Percent_Identity=25.9842519685039, Blast_Score=67, Evalue=4e-11, Organism=Homo sapiens, GI4506999, Length=308, Percent_Identity=25.6493506493506, Blast_Score=67, Evalue=4e-11, Organism=Homo sapiens, GI23510410, Length=308, Percent_Identity=25.6493506493506, Blast_Score=67, Evalue=5e-11, Organism=Homo sapiens, GI24308167, Length=415, Percent_Identity=22.8915662650602, Blast_Score=66, Evalue=6e-11, Organism=Homo sapiens, GI262399383, Length=166, Percent_Identity=27.710843373494, Blast_Score=65, Evalue=1e-10, Organism=Escherichia coli, GI1788074, Length=438, Percent_Identity=29.6803652968037, Blast_Score=98, Evalue=1e-21, Organism=Escherichia coli, GI1786229, Length=444, Percent_Identity=25.6756756756757, Blast_Score=96, Evalue=5e-21, Organism=Escherichia coli, GI87082159, Length=217, Percent_Identity=29.9539170506912, Blast_Score=95, Evalue=1e-20, Organism=Escherichia coli, GI1789207, Length=399, Percent_Identity=27.8195488721804, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI87082231, Length=208, Percent_Identity=27.4038461538462, Blast_Score=79, Evalue=6e-16, Organism=Escherichia coli, GI1788068, Length=495, Percent_Identity=24.040404040404, Blast_Score=78, Evalue=1e-15, Organism=Escherichia coli, GI1789312, Length=446, Percent_Identity=25.5605381165919, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI1790463, Length=391, Percent_Identity=24.8081841432225, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI87082404, Length=184, Percent_Identity=25, Blast_Score=65, Evalue=7e-12, Organism=Caenorhabditis elegans, GI32564663, Length=443, Percent_Identity=25.9593679458239, Blast_Score=88, Evalue=8e-18, Organism=Caenorhabditis elegans, GI17565978, Length=334, Percent_Identity=23.0538922155689, Blast_Score=69, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6323653, Length=385, Percent_Identity=25.974025974026, Blast_Score=73, Evalue=8e-14, Organism=Saccharomyces cerevisiae, GI6321886, Length=374, Percent_Identity=24.8663101604278, Blast_Score=67, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6321100, Length=390, Percent_Identity=25.3846153846154, Blast_Score=67, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6324400, Length=423, Percent_Identity=23.8770685579196, Blast_Score=66, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6320766, Length=416, Percent_Identity=23.5576923076923, Blast_Score=66, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6322618, Length=419, Percent_Identity=23.8663484486874, Blast_Score=66, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6319956, Length=419, Percent_Identity=23.8663484486874, Blast_Score=65, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6319718, Length=321, Percent_Identity=25.2336448598131, Blast_Score=63, Evalue=8e-11, Organism=Saccharomyces cerevisiae, GI6321068, Length=364, Percent_Identity=21.978021978022, Blast_Score=63, Evalue=9e-11, Organism=Drosophila melanogaster, GI24640198, Length=238, Percent_Identity=24.7899159663866, Blast_Score=69, Evalue=5e-12, Organism=Drosophila melanogaster, GI24640196, Length=238, Percent_Identity=24.7899159663866, Blast_Score=69, Evalue=5e-12, Organism=Drosophila melanogaster, GI24640200, Length=238, Percent_Identity=24.7899159663866, Blast_Score=69, Evalue=5e-12, Organism=Drosophila melanogaster, GI19922134, Length=392, Percent_Identity=24.234693877551, Blast_Score=69, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR005828 [H]
Pfam domain/function: PF00083 Sugar_tr [H]
EC number: NA
Molecular weight: Translated: 50211; Mature: 50079
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRPPAVETSIPARLDRLAWGRFHWLVVVALGVAWILDGLEVTLVGSLSGAIAKSPDMQL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCH SSAAVGGLGSSYVAGAVLGALLFGWLTDRLGRKRLFTVTLIVYLAGTIASGLAWNYTALL HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHH AFRFVTGMGIGGEYAAINATIQELVPARFRGFTDLVINGSYWIGAALGAAGALAALDPQL HHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCCCC VPPAYGWRLAFILGGFLAATALALRRHIPESPRWLMTHGRPSEAEQIVAGIEFRCGPVMP CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHCCCEECCCCCC TESLPTIRLRTDVSSWFGIGLQALLGRYRRRAVLGVCLMTAQAFCYNAIFFTYAIVLTKF CCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YGVPGDRVGMFILPFALGNFAGLLILGRLFDTVGRRTMITATYATAGLLMIATGLLFVGA HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHCC DLSATGQTAAWTMIFFFASTAASSAYLTVSECFPLEIRAVAIALFYAFGTALGGIAGPLL CCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FGMLIGSGERINLFYGDLLGGLLMLGAAAVEAAIGVEAARRPLESVARPLSEVD HHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SRPPAVETSIPARLDRLAWGRFHWLVVVALGVAWILDGLEVTLVGSLSGAIAKSPDMQL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCH SSAAVGGLGSSYVAGAVLGALLFGWLTDRLGRKRLFTVTLIVYLAGTIASGLAWNYTALL HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHH AFRFVTGMGIGGEYAAINATIQELVPARFRGFTDLVINGSYWIGAALGAAGALAALDPQL HHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCCCC VPPAYGWRLAFILGGFLAATALALRRHIPESPRWLMTHGRPSEAEQIVAGIEFRCGPVMP CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHCCCEECCCCCC TESLPTIRLRTDVSSWFGIGLQALLGRYRRRAVLGVCLMTAQAFCYNAIFFTYAIVLTKF CCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YGVPGDRVGMFILPFALGNFAGLLILGRLFDTVGRRTMITATYATAGLLMIATGLLFVGA HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHCC DLSATGQTAAWTMIFFFASTAASSAYLTVSECFPLEIRAVAIALFYAFGTALGGIAGPLL CCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FGMLIGSGERINLFYGDLLGGLLMLGAAAVEAAIGVEAARRPLESVARPLSEVD HHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7584024; 8011666; 9384377 [H]