| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
Click here to switch to the map view.
The map label for this gene is 148260335
Identifier: 148260335
GI number: 148260335
Start: 1489390
End: 1490094
Strand: Reverse
Name: 148260335
Synonym: Acry_1332
Alternate gene names: NA
Gene position: 1490094-1489390 (Counterclockwise)
Preceding gene: 148260336
Following gene: 148260333
Centisome position: 43.97
GC content: 78.16
Gene sequence:
>705_bases ATGAGCGGGTCGATGGCGGACGACGGGCCGGACCGGGCGGGGCTTTACGTGCTGGGCCTGCTGCGCGGCGCGGAGCGGCG GGAGTTCGAGGCCGCGTGCGCGCGCGATCCGGCGCTGGCCGCCGAGGTGGCGGCGTGGGAGGAGCGGCTGCTGCCGCTGG CGCTCGCGGTGCCGCCGGTGGCGCCGGGGCCGGCGGTGTGGGCGGCGATCGAGCGCGCGACGAGCCCGCGCGCGGCCGCG CCGGCGCGGCGCAACCGGCTGCGGGAGATCTGGGACAATCTGTTCGTCTGGCGGGGCATCGCCCTGGCCGGCGCGGTGGC GGCGGCGCTGCTGCTCGTGCTGCCGCGCGGGGCGCCGGGGCCGGCGATGGTCGCGGTGCTGTCGGCGAAGTCGGGCCCGG TGTTCACCGTGGCGATGAAGACGAACGGCGCGCTGAACATCGCGCCGGTGGGGCATGCGGCGCCGCCGGAGGGCAAGGTC TGGCAGCTCTGGGCGGTCGGCCAGGGCGAGGCGCCGGTGCCGATCGGCTTCGTGCAGGCGGGGGCGACAAGGCTGCCGGC GAACGACGTGCCGGCGCGGCTGCGCCGGGCGCACACGCTGATCGCGGTGACGGTGGAGCCGCCCGGCGGCTCGCCCACCG GCAAGCCGGACATGCCGATCGTCTTCGCCGGGCCGCTGCTGCCGGTGGCGCCGACAGCCTCCTGA
Upstream 100 bases:
>100_bases ATTCGCACAGCGAGATCGCCGAACGCACGGACACGCCGCTCGGCACGGTGAAGAGCTGGATTTCCCGGGCCCTCGGCGCG CTGAAAAGGTGTCTTGAGCG
Downstream 100 bases:
>100_bases TATCCGGCCGGATCAGAGATCGAGGCTGGTCTGCGCCGGCGGCGCGCGGTCGGCTTCGGGACGGACGCCGAGCGTGCCGT CGCCGAAATGCAGCACGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MSGSMADDGPDRAGLYVLGLLRGAERREFEAACARDPALAAEVAAWEERLLPLALAVPPVAPGPAVWAAIERATSPRAAA PARRNRLREIWDNLFVWRGIALAGAVAAALLLVLPRGAPGPAMVAVLSAKSGPVFTVAMKTNGALNIAPVGHAAPPEGKV WQLWAVGQGEAPVPIGFVQAGATRLPANDVPARLRRAHTLIAVTVEPPGGSPTGKPDMPIVFAGPLLPVAPTAS
Sequences:
>Translated_234_residues MSGSMADDGPDRAGLYVLGLLRGAERREFEAACARDPALAAEVAAWEERLLPLALAVPPVAPGPAVWAAIERATSPRAAA PARRNRLREIWDNLFVWRGIALAGAVAAALLLVLPRGAPGPAMVAVLSAKSGPVFTVAMKTNGALNIAPVGHAAPPEGKV WQLWAVGQGEAPVPIGFVQAGATRLPANDVPARLRRAHTLIAVTVEPPGGSPTGKPDMPIVFAGPLLPVAPTAS >Mature_233_residues SGSMADDGPDRAGLYVLGLLRGAERREFEAACARDPALAAEVAAWEERLLPLALAVPPVAPGPAVWAAIERATSPRAAAP ARRNRLREIWDNLFVWRGIALAGAVAAALLLVLPRGAPGPAMVAVLSAKSGPVFTVAMKTNGALNIAPVGHAAPPEGKVW QLWAVGQGEAPVPIGFVQAGATRLPANDVPARLRRAHTLIAVTVEPPGGSPTGKPDMPIVFAGPLLPVAPTAS
Specific function: Unknown
COG id: COG5343
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24066; Mature: 23935
Theoretical pI: Translated: 10.43; Mature: 10.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGSMADDGPDRAGLYVLGLLRGAERREFEAACARDPALAAEVAAWEERLLPLALAVPPV CCCCCCCCCCCCCHHHHEEHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHCEEEEECCCC APGPAVWAAIERATSPRAAAPARRNRLREIWDNLFVWRGIALAGAVAAALLLVLPRGAPG CCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PAMVAVLSAKSGPVFTVAMKTNGALNIAPVGHAAPPEGKVWQLWAVGQGEAPVPIGFVQA CCEEEEEECCCCCEEEEEEECCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCCEEEECC GATRLPANDVPARLRRAHTLIAVTVEPPGGSPTGKPDMPIVFAGPLLPVAPTAS CCCCCCCCCHHHHHHHCEEEEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCC >Mature Secondary Structure SGSMADDGPDRAGLYVLGLLRGAERREFEAACARDPALAAEVAAWEERLLPLALAVPPV CCCCCCCCCCCCHHHHEEHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHCEEEEECCCC APGPAVWAAIERATSPRAAAPARRNRLREIWDNLFVWRGIALAGAVAAALLLVLPRGAPG CCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PAMVAVLSAKSGPVFTVAMKTNGALNIAPVGHAAPPEGKVWQLWAVGQGEAPVPIGFVQA CCEEEEEECCCCCEEEEEEECCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCCEEEECC GATRLPANDVPARLRRAHTLIAVTVEPPGGSPTGKPDMPIVFAGPLLPVAPTAS CCCCCCCCCHHHHHHHCEEEEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA