| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is aatC [H]
Identifier: 148260302
GI number: 148260302
Start: 1452492
End: 1453703
Strand: Reverse
Name: aatC [H]
Synonym: Acry_1299
Alternate gene names: 148260302
Gene position: 1453703-1452492 (Counterclockwise)
Preceding gene: 148260303
Following gene: 148260301
Centisome position: 42.89
GC content: 66.91
Gene sequence:
>1212_bases ATGACCGAGGAATTTCACCGCATCCGCCGCCTTCCACCCTATGTCTTCGCGGAGGTGAACCAGGCGAAGGCGGCCGCGCG CAACCGGCGCGAGGACATCATCGACCTCGGCATGGGCAATCCCGACAGCGCGACGCCGCCGCATATCGTGGCCAAGCTGG TCGAGACCGTGGCCGACCCGCGCAGCCACCGCTATTCCACCAGCAAGGGCATTCCCGGCCTGCGGCGCGCGCTTGCCGCG TATTACGACCGCCGCTTCGGCGTGAAGCTGAACCCGGAGACCGAGGTGATCGCCACACTCGGCTCGAAGGAGGGGCTGGC CAACCTCGCCAACGCGATCACCTCGCCGGGCGACACGATCCTGGTGCCCAACCCGTCCTACCCGATCCACCAGTTCGGCT TCATCATCGCCGGGGCCTCGGTGCGCTCGGTGCCGGCCACGCCGGATGACGAGATGCTGCGCGCGCTCGACCGTGCGGTG CGGCACTCGGTGCCGAAGCCGACCGCGCTGATCGTGAATTTTCCTTCAAATCCAACGGCATATCTGGCGACCCTGGATTT CTACAAGGAAATCGTCGCGTTCGCCCGCAAGCACGAGATCTTCATCCTGTCCGATCTCGCCTATGCCGAGATCTATTTCG AGGGCGAGCCGCCGCCCTCGGTGCTGCAGGTCGAGGGGGCGAAGGACATCACGGTGGAATTCACCTCGATGTCGAAGACC TATTCGATGCCGGGCTGGCGCATGGGCTTCGCCGCCGGCAATCCGCGGCTGGTCGCGGCGCTCGCGCGCATGAAGTCCTA TCTCGACTACGGCGCCTTCACGCCGATCCAGGTCGCGGCGACGGCGGCGCTGAACGGGCCGCAGGACTGCGTCGAGCAGA TGCGCACGCTCTACCGCGAACGGCGCGACGTGCTGATCAAGGGACTCGCGCAGGCAGGCTGGGACGTGCCGAGCCCGGCG GGGTCGATGTTCGCCTGGGCGCCGATTCCGGAGCGCTTCGCGCATCTCGGCTCGGTCGATTTCGCGAAGCTGCTGCTGGA GCGCGCCAAGGTCGCGGTCGCGCCGGGGATCGGCTTCGGCGAGTATGGCGATGGCCATGTCCGCATCGCGCTCGTCGAAA ATACCCATCGGCTCCGGCAGGCGGTGCGGAACATCCGCGCCTTCATGGCACCGGGCAATGCGCCCAACCAGCAGGAGAGC GTCTCGGCATGA
Upstream 100 bases:
>100_bases CAGACATTCGCCTCGAAGCGCTCGCCAGCGGTCGCGGCGGTGCGGCACAGATGTTATACCCCCGCCACAAACCCACCACA CCGGACGCTCAGGACCGATC
Downstream 100 bases:
>100_bases ATGGTGAACTGTCGGTCGGGATCGCCGGGCTGGGGACGGTCGGCGCCGGGGTCGTGCGGCTGTTGCAGGAGAATGCGGCG ATCATCGCCGCGCGGGCCGG
Product: aminotransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 403; Mature: 402
Protein sequence:
>403_residues MTEEFHRIRRLPPYVFAEVNQAKAAARNRREDIIDLGMGNPDSATPPHIVAKLVETVADPRSHRYSTSKGIPGLRRALAA YYDRRFGVKLNPETEVIATLGSKEGLANLANAITSPGDTILVPNPSYPIHQFGFIIAGASVRSVPATPDDEMLRALDRAV RHSVPKPTALIVNFPSNPTAYLATLDFYKEIVAFARKHEIFILSDLAYAEIYFEGEPPPSVLQVEGAKDITVEFTSMSKT YSMPGWRMGFAAGNPRLVAALARMKSYLDYGAFTPIQVAATAALNGPQDCVEQMRTLYRERRDVLIKGLAQAGWDVPSPA GSMFAWAPIPERFAHLGSVDFAKLLLERAKVAVAPGIGFGEYGDGHVRIALVENTHRLRQAVRNIRAFMAPGNAPNQQES VSA
Sequences:
>Translated_403_residues MTEEFHRIRRLPPYVFAEVNQAKAAARNRREDIIDLGMGNPDSATPPHIVAKLVETVADPRSHRYSTSKGIPGLRRALAA YYDRRFGVKLNPETEVIATLGSKEGLANLANAITSPGDTILVPNPSYPIHQFGFIIAGASVRSVPATPDDEMLRALDRAV RHSVPKPTALIVNFPSNPTAYLATLDFYKEIVAFARKHEIFILSDLAYAEIYFEGEPPPSVLQVEGAKDITVEFTSMSKT YSMPGWRMGFAAGNPRLVAALARMKSYLDYGAFTPIQVAATAALNGPQDCVEQMRTLYRERRDVLIKGLAQAGWDVPSPA GSMFAWAPIPERFAHLGSVDFAKLLLERAKVAVAPGIGFGEYGDGHVRIALVENTHRLRQAVRNIRAFMAPGNAPNQQES VSA >Mature_402_residues TEEFHRIRRLPPYVFAEVNQAKAAARNRREDIIDLGMGNPDSATPPHIVAKLVETVADPRSHRYSTSKGIPGLRRALAAY YDRRFGVKLNPETEVIATLGSKEGLANLANAITSPGDTILVPNPSYPIHQFGFIIAGASVRSVPATPDDEMLRALDRAVR HSVPKPTALIVNFPSNPTAYLATLDFYKEIVAFARKHEIFILSDLAYAEIYFEGEPPPSVLQVEGAKDITVEFTSMSKTY SMPGWRMGFAAGNPRLVAALARMKSYLDYGAFTPIQVAATAALNGPQDCVEQMRTLYRERRDVLIKGLAQAGWDVPSPAG SMFAWAPIPERFAHLGSVDFAKLLLERAKVAVAPGIGFGEYGDGHVRIALVENTHRLRQAVRNIRAFMAPGNAPNQQESV SA
Specific function: Unknown
COG id: COG0436
COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI56713256, Length=412, Percent_Identity=22.0873786407767, Blast_Score=101, Evalue=2e-21, Organism=Homo sapiens, GI56713254, Length=386, Percent_Identity=22.020725388601, Blast_Score=100, Evalue=3e-21, Organism=Homo sapiens, GI95147551, Length=393, Percent_Identity=20.8651399491094, Blast_Score=94, Evalue=3e-19, Organism=Homo sapiens, GI169881279, Length=393, Percent_Identity=20.8651399491094, Blast_Score=94, Evalue=3e-19, Organism=Homo sapiens, GI215599424, Length=379, Percent_Identity=25.065963060686, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI19263340, Length=379, Percent_Identity=25.065963060686, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI4507369, Length=388, Percent_Identity=22.680412371134, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI4885351, Length=383, Percent_Identity=24.5430809399478, Blast_Score=67, Evalue=2e-11, Organism=Escherichia coli, GI1788722, Length=398, Percent_Identity=55.7788944723618, Blast_Score=466, Evalue=1e-132, Organism=Escherichia coli, GI1786816, Length=333, Percent_Identity=24.9249249249249, Blast_Score=119, Evalue=4e-28, Organism=Escherichia coli, GI1788627, Length=389, Percent_Identity=24.1645244215938, Blast_Score=89, Evalue=4e-19, Organism=Escherichia coli, GI1787710, Length=297, Percent_Identity=24.9158249158249, Blast_Score=67, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17567369, Length=410, Percent_Identity=24.1463414634146, Blast_Score=94, Evalue=2e-19, Organism=Caenorhabditis elegans, GI71994476, Length=366, Percent_Identity=23.4972677595628, Blast_Score=90, Evalue=2e-18, Organism=Caenorhabditis elegans, GI71994472, Length=366, Percent_Identity=23.4972677595628, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17567663, Length=407, Percent_Identity=23.3415233415233, Blast_Score=80, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6322401, Length=387, Percent_Identity=22.7390180878553, Blast_Score=92, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6320317, Length=355, Percent_Identity=22.5352112676056, Blast_Score=68, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6323118, Length=352, Percent_Identity=23.2954545454545, Blast_Score=64, Evalue=3e-11, Organism=Drosophila melanogaster, GI28573069, Length=316, Percent_Identity=25.9493670886076, Blast_Score=108, Evalue=6e-24, Organism=Drosophila melanogaster, GI24646114, Length=316, Percent_Identity=25.9493670886076, Blast_Score=108, Evalue=6e-24, Organism=Drosophila melanogaster, GI28573067, Length=316, Percent_Identity=25.9493670886076, Blast_Score=108, Evalue=6e-24, Organism=Drosophila melanogaster, GI28573065, Length=316, Percent_Identity=25.9493670886076, Blast_Score=108, Evalue=6e-24, Organism=Drosophila melanogaster, GI24641770, Length=372, Percent_Identity=25.5376344086022, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI24641760, Length=372, Percent_Identity=25.5376344086022, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI24641768, Length=372, Percent_Identity=25.5376344086022, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI24641766, Length=372, Percent_Identity=25.5376344086022, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI24641764, Length=372, Percent_Identity=25.5376344086022, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI45551451, Length=372, Percent_Identity=25.5376344086022, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI18859735, Length=375, Percent_Identity=23.2, Blast_Score=71, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004839 - InterPro: IPR004838 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: 2.6.1.- [C]
Molecular weight: Translated: 44139; Mature: 44008
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: PS00105 AA_TRANSFER_CLASS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEEFHRIRRLPPYVFAEVNQAKAAARNRREDIIDLGMGNPDSATPPHIVAKLVETVADP CCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCC RSHRYSTSKGIPGLRRALAAYYDRRFGVKLNPETEVIATLGSKEGLANLANAITSPGDTI HHCCCCCCCCCHHHHHHHHHHHHHHCCEEECCCHHEEEECCCCCHHHHHHHHHCCCCCEE LVPNPSYPIHQFGFIIAGASVRSVPATPDDEMLRALDRAVRHSVPKPTALIVNFPSNPTA EECCCCCCHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCE YLATLDFYKEIVAFARKHEIFILSDLAYAEIYFEGEPPPSVLQVEGAKDITVEFTSMSKT EHHHHHHHHHHHHHHHHCCEEEEECCEEEEEEECCCCCCCEEEECCCCEEEEEEECCCCC YSMPGWRMGFAAGNPRLVAALARMKSYLDYGAFTPIQVAATAALNGPQDCVEQMRTLYRE CCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHH RRDVLIKGLAQAGWDVPSPAGSMFAWAPIPERFAHLGSVDFAKLLLERAKVAVAPGIGFG HHHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHHCCCHHHHHHHHHHHHEEECCCCCCC EYGDGHVRIALVENTHRLRQAVRNIRAFMAPGNAPNQQESVSA CCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCHHCCCC >Mature Secondary Structure TEEFHRIRRLPPYVFAEVNQAKAAARNRREDIIDLGMGNPDSATPPHIVAKLVETVADP CHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCC RSHRYSTSKGIPGLRRALAAYYDRRFGVKLNPETEVIATLGSKEGLANLANAITSPGDTI HHCCCCCCCCCHHHHHHHHHHHHHHCCEEECCCHHEEEECCCCCHHHHHHHHHCCCCCEE LVPNPSYPIHQFGFIIAGASVRSVPATPDDEMLRALDRAVRHSVPKPTALIVNFPSNPTA EECCCCCCHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCE YLATLDFYKEIVAFARKHEIFILSDLAYAEIYFEGEPPPSVLQVEGAKDITVEFTSMSKT EHHHHHHHHHHHHHHHHCCEEEEECCEEEEEEECCCCCCCEEEECCCCEEEEEEECCCCC YSMPGWRMGFAAGNPRLVAALARMKSYLDYGAFTPIQVAATAALNGPQDCVEQMRTLYRE CCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHH RRDVLIKGLAQAGWDVPSPAGSMFAWAPIPERFAHLGSVDFAKLLLERAKVAVAPGIGFG HHHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHHCCCHHHHHHHHHHHHEEECCCCCCC EYGDGHVRIALVENTHRLRQAVRNIRAFMAPGNAPNQQESVSA CCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: Pyridoxal Phosphate. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11481430; 9734305 [H]