| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is 148260284
Identifier: 148260284
GI number: 148260284
Start: 1432340
End: 1432981
Strand: Reverse
Name: 148260284
Synonym: Acry_1281
Alternate gene names: NA
Gene position: 1432981-1432340 (Counterclockwise)
Preceding gene: 148260285
Following gene: 148260280
Centisome position: 42.28
GC content: 57.01
Gene sequence:
>642_bases ATGGCGATTGCGAGGCATCAATTGACGAATTCTCTTACGCTCGCACGCAACATTGATATTGCCCGGCATGAGCTGGAAGC AAGCGGGCGCGTCAGCCTGCCTAGGAGGCGTGCGATCTGGCGCGCGATGTATCCCGATATCGAAACCAAACAAGGGCGCG ATGTTGGCCATCGCCGACTTGTTCTGCTGGATATTCTCGCGGTCCAGCGCGTAATGCCGCTTTGGCGCGCGGTCTTTCCG ACTGATAACTCGCCAGCTTCGATGCTGCGAATTGCTCTTGATACCGCCTTCGATCGTACGGATCCGGTACTGGCTGAAAA AACCCGCGATTCGCTTTATGTCGATATCGTCGAGAACCGGAGCTATGCGAAAGGTCAGGAGACGGCAATGTTTGTCGGCC ATGCGGCTGCCAACACCATCACTACCGCCGTCTTCCAGGGGGTTCCGGATGCAGATGCCGAAATCGATGACGATGATCTC GATCCGGAAGGTTTCGAGCCGAGCATGCTTGCAGCCGCGGCGGAGGCCGGCGGATTACCCTGGTCCGAAGCCACCGACCG GAAAATAGAACGCGCCTTCTGGGACTGGTATCTAGGGAGTGCCATCACAAGAGCCTGTGAAATGACGGGAAACGAGGTTT AG
Upstream 100 bases:
>100_bases CAAAGCTCGCGATGTCGAGCGGGGAAGGCCAGACGGTCACCGATCCGGACGGAACATGGACTTTCGGGGCCGATGGAACG ATCACAGGCCGAAATCATGA
Downstream 100 bases:
>100_bases CCTACCTTCCCAAATTAGAGTCGATGTCACTGATTATCGAACGACGGCTCGTAGAAAACCGCTCATAATTGGCCGCCTGG GCGCGCAGTTGCCTGCGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MAIARHQLTNSLTLARNIDIARHELEASGRVSLPRRRAIWRAMYPDIETKQGRDVGHRRLVLLDILAVQRVMPLWRAVFP TDNSPASMLRIALDTAFDRTDPVLAEKTRDSLYVDIVENRSYAKGQETAMFVGHAAANTITTAVFQGVPDADAEIDDDDL DPEGFEPSMLAAAAEAGGLPWSEATDRKIERAFWDWYLGSAITRACEMTGNEV
Sequences:
>Translated_213_residues MAIARHQLTNSLTLARNIDIARHELEASGRVSLPRRRAIWRAMYPDIETKQGRDVGHRRLVLLDILAVQRVMPLWRAVFP TDNSPASMLRIALDTAFDRTDPVLAEKTRDSLYVDIVENRSYAKGQETAMFVGHAAANTITTAVFQGVPDADAEIDDDDL DPEGFEPSMLAAAAEAGGLPWSEATDRKIERAFWDWYLGSAITRACEMTGNEV >Mature_212_residues AIARHQLTNSLTLARNIDIARHELEASGRVSLPRRRAIWRAMYPDIETKQGRDVGHRRLVLLDILAVQRVMPLWRAVFPT DNSPASMLRIALDTAFDRTDPVLAEKTRDSLYVDIVENRSYAKGQETAMFVGHAAANTITTAVFQGVPDADAEIDDDDLD PEGFEPSMLAAAAEAGGLPWSEATDRKIERAFWDWYLGSAITRACEMTGNEV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23712; Mature: 23581
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIARHQLTNSLTLARNIDIARHELEASGRVSLPRRRAIWRAMYPDIETKQGRDVGHRRL CCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHH VLLDILAVQRVMPLWRAVFPTDNSPASMLRIALDTAFDRTDPVLAEKTRDSLYVDIVENR HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCEEEEEECCC SYAKGQETAMFVGHAAANTITTAVFQGVPDADAEIDDDDLDPEGFEPSMLAAAAEAGGLP CCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC WSEATDRKIERAFWDWYLGSAITRACEMTGNEV CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure AIARHQLTNSLTLARNIDIARHELEASGRVSLPRRRAIWRAMYPDIETKQGRDVGHRRL CCCHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHH VLLDILAVQRVMPLWRAVFPTDNSPASMLRIALDTAFDRTDPVLAEKTRDSLYVDIVENR HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCEEEEEECCC SYAKGQETAMFVGHAAANTITTAVFQGVPDADAEIDDDDLDPEGFEPSMLAAAAEAGGLP CCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC WSEATDRKIERAFWDWYLGSAITRACEMTGNEV CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA