| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is 148260285
Identifier: 148260285
GI number: 148260285
Start: 1433134
End: 1433745
Strand: Reverse
Name: 148260285
Synonym: Acry_1282
Alternate gene names: NA
Gene position: 1433745-1433134 (Counterclockwise)
Preceding gene: 148260286
Following gene: 148260284
Centisome position: 42.3
GC content: 62.91
Gene sequence:
>612_bases ATGGAACAGCGTATGGAAGCGGTTCTGGCGGCTGAGCCGCTCCGGGGTGTTCGAGGCGTTCTTTCAGCTTCTCGCCGAAT ACAGCCAGACCGCGCATCTGGTGCAGTTTTTCGACAGCACAACGGCGCGCGCCCACGTCTCCGCCGCCGGGGCAAAAGGG GGCAGCAGGGCCTGGCCCTTGGCCGCTCGCGTGGCGGCTTCCCGACCAAAATTCACCTCAAGACCGATCTCGACGGCCAC CCGCCCGACTTCCACCTGACCGGCGGCGAAGCCAGCGATACCACCGAGTTCGAGACCTCGCTCGATATCGGACCCGACAT CCGTCCGCGTATCGCGGTGACCGACAAGAGATACGACAGCCGCGCCAACCGAGTGGCAGCTCGCGCGCGCGGCATCACCC CGGTCATCCCGCGTCGCGAAAATTCCAAGGAAAGAGGCCAATTCTTCCCGAAGCGGTTGTACCGCCGACGCGCACGCATC GAGCAGACGATCGGCAAACTCAAACGCTTCAAACGCATCGCCATGCGCTGCGATAAGACCGCAACCAGCTACGCCGCCTT CATCAGCTTCGCTTGCGCACTGATATTGGTTAAACCCGTCCACGCGACCTAA
Upstream 100 bases:
>100_bases GTGGCGAGCCGGGGCATGACGACCGGAAATTTCTGGAAGCGGTGCACTATTTCACTGTCCATAGCATCACGTGGCGGGCC CTGCCTGCGGAATTTGGCAA
Downstream 100 bases:
>100_bases CGAGCCCATCGGTGTTACAAAGCCGATGTGTTCCGACTCCGAACGTATTTTTCAAAGCTCGCGATGTCGAGCGGGGAAGG CCAGACGGTCACCGATCCGG
Product: transposase, IS4 family protein
Products: NA
Alternate protein names: Transposase IS4 Family Protein; IS4 Family Transposase; ISSod6 Transposase; Transposase And Inactivated Derivatives-Like Protein; LOW QUALITY PROTEIN Transposase; Transposase Is4 Family Protein; Transposase Of Unassigned Insertion Sequence; ISSpo7 Transposase; Transposase Is4-Like; ISSoc13 Transposase OrfB; Transposase B; Transposase-Like Protein; Insertion Sequence Transposase Protein; ISSod6 Transposase IS; Transposase IS4 Protein; Transposase Of; IS5 Family Transposase; Transposase IS5 Family Protein; LOW QUALITY PROTEIN IS4 Family Transposase
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MEQRMEAVLAAEPLRGVRGVLSASRRIQPDRASGAVFRQHNGARPRLRRRGKRGQQGLALGRSRGGFPTKIHLKTDLDGH PPDFHLTGGEASDTTEFETSLDIGPDIRPRIAVTDKRYDSRANRVAARARGITPVIPRRENSKERGQFFPKRLYRRRARI EQTIGKLKRFKRIAMRCDKTATSYAAFISFACALILVKPVHAT
Sequences:
>Translated_203_residues MEQRMEAVLAAEPLRGVRGVLSASRRIQPDRASGAVFRQHNGARPRLRRRGKRGQQGLALGRSRGGFPTKIHLKTDLDGH PPDFHLTGGEASDTTEFETSLDIGPDIRPRIAVTDKRYDSRANRVAARARGITPVIPRRENSKERGQFFPKRLYRRRARI EQTIGKLKRFKRIAMRCDKTATSYAAFISFACALILVKPVHAT >Mature_203_residues MEQRMEAVLAAEPLRGVRGVLSASRRIQPDRASGAVFRQHNGARPRLRRRGKRGQQGLALGRSRGGFPTKIHLKTDLDGH PPDFHLTGGEASDTTEFETSLDIGPDIRPRIAVTDKRYDSRANRVAARARGITPVIPRRENSKERGQFFPKRLYRRRARI EQTIGKLKRFKRIAMRCDKTATSYAAFISFACALILVKPVHAT
Specific function: Unknown
COG id: COG3293
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22852; Mature: 22852
Theoretical pI: Translated: 12.05; Mature: 12.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQRMEAVLAAEPLRGVRGVLSASRRIQPDRASGAVFRQHNGARPRLRRRGKRGQQGLAL CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHCCCCCCCHHHH GRSRGGFPTKIHLKTDLDGHPPDFHLTGGEASDTTEFETSLDIGPDIRPRIAVTDKRYDS CCCCCCCCEEEEEEECCCCCCCCEEEECCCCCCCCCHHHCCCCCCCCCCCEEECCCHHHH RANRVAARARGITPVIPRRENSKERGQFFPKRLYRRRARIEQTIGKLKRFKRIAMRCDKT HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH ATSYAAFISFACALILVKPVHAT HHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MEQRMEAVLAAEPLRGVRGVLSASRRIQPDRASGAVFRQHNGARPRLRRRGKRGQQGLAL CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHCCCCCCCHHHH GRSRGGFPTKIHLKTDLDGHPPDFHLTGGEASDTTEFETSLDIGPDIRPRIAVTDKRYDS CCCCCCCCEEEEEEECCCCCCCCEEEECCCCCCCCCHHHCCCCCCCCCCCEEECCCHHHH RANRVAARARGITPVIPRRENSKERGQFFPKRLYRRRARIEQTIGKLKRFKRIAMRCDKT HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH ATSYAAFISFACALILVKPVHAT HHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA