Definition Acidiphilium cryptum JF-5 chromosome, complete genome.
Accession NC_009484
Length 3,389,227

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The map label for this gene is 148260285

Identifier: 148260285

GI number: 148260285

Start: 1433134

End: 1433745

Strand: Reverse

Name: 148260285

Synonym: Acry_1282

Alternate gene names: NA

Gene position: 1433745-1433134 (Counterclockwise)

Preceding gene: 148260286

Following gene: 148260284

Centisome position: 42.3

GC content: 62.91

Gene sequence:

>612_bases
ATGGAACAGCGTATGGAAGCGGTTCTGGCGGCTGAGCCGCTCCGGGGTGTTCGAGGCGTTCTTTCAGCTTCTCGCCGAAT
ACAGCCAGACCGCGCATCTGGTGCAGTTTTTCGACAGCACAACGGCGCGCGCCCACGTCTCCGCCGCCGGGGCAAAAGGG
GGCAGCAGGGCCTGGCCCTTGGCCGCTCGCGTGGCGGCTTCCCGACCAAAATTCACCTCAAGACCGATCTCGACGGCCAC
CCGCCCGACTTCCACCTGACCGGCGGCGAAGCCAGCGATACCACCGAGTTCGAGACCTCGCTCGATATCGGACCCGACAT
CCGTCCGCGTATCGCGGTGACCGACAAGAGATACGACAGCCGCGCCAACCGAGTGGCAGCTCGCGCGCGCGGCATCACCC
CGGTCATCCCGCGTCGCGAAAATTCCAAGGAAAGAGGCCAATTCTTCCCGAAGCGGTTGTACCGCCGACGCGCACGCATC
GAGCAGACGATCGGCAAACTCAAACGCTTCAAACGCATCGCCATGCGCTGCGATAAGACCGCAACCAGCTACGCCGCCTT
CATCAGCTTCGCTTGCGCACTGATATTGGTTAAACCCGTCCACGCGACCTAA

Upstream 100 bases:

>100_bases
GTGGCGAGCCGGGGCATGACGACCGGAAATTTCTGGAAGCGGTGCACTATTTCACTGTCCATAGCATCACGTGGCGGGCC
CTGCCTGCGGAATTTGGCAA

Downstream 100 bases:

>100_bases
CGAGCCCATCGGTGTTACAAAGCCGATGTGTTCCGACTCCGAACGTATTTTTCAAAGCTCGCGATGTCGAGCGGGGAAGG
CCAGACGGTCACCGATCCGG

Product: transposase, IS4 family protein

Products: NA

Alternate protein names: Transposase IS4 Family Protein; IS4 Family Transposase; ISSod6 Transposase; Transposase And Inactivated Derivatives-Like Protein; LOW QUALITY PROTEIN Transposase; Transposase Is4 Family Protein; Transposase Of Unassigned Insertion Sequence; ISSpo7 Transposase; Transposase Is4-Like; ISSoc13 Transposase OrfB; Transposase B; Transposase-Like Protein; Insertion Sequence Transposase Protein; ISSod6 Transposase IS; Transposase IS4 Protein; Transposase Of; IS5 Family Transposase; Transposase IS5 Family Protein; LOW QUALITY PROTEIN IS4 Family Transposase

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MEQRMEAVLAAEPLRGVRGVLSASRRIQPDRASGAVFRQHNGARPRLRRRGKRGQQGLALGRSRGGFPTKIHLKTDLDGH
PPDFHLTGGEASDTTEFETSLDIGPDIRPRIAVTDKRYDSRANRVAARARGITPVIPRRENSKERGQFFPKRLYRRRARI
EQTIGKLKRFKRIAMRCDKTATSYAAFISFACALILVKPVHAT

Sequences:

>Translated_203_residues
MEQRMEAVLAAEPLRGVRGVLSASRRIQPDRASGAVFRQHNGARPRLRRRGKRGQQGLALGRSRGGFPTKIHLKTDLDGH
PPDFHLTGGEASDTTEFETSLDIGPDIRPRIAVTDKRYDSRANRVAARARGITPVIPRRENSKERGQFFPKRLYRRRARI
EQTIGKLKRFKRIAMRCDKTATSYAAFISFACALILVKPVHAT
>Mature_203_residues
MEQRMEAVLAAEPLRGVRGVLSASRRIQPDRASGAVFRQHNGARPRLRRRGKRGQQGLALGRSRGGFPTKIHLKTDLDGH
PPDFHLTGGEASDTTEFETSLDIGPDIRPRIAVTDKRYDSRANRVAARARGITPVIPRRENSKERGQFFPKRLYRRRARI
EQTIGKLKRFKRIAMRCDKTATSYAAFISFACALILVKPVHAT

Specific function: Unknown

COG id: COG3293

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22852; Mature: 22852

Theoretical pI: Translated: 12.05; Mature: 12.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQRMEAVLAAEPLRGVRGVLSASRRIQPDRASGAVFRQHNGARPRLRRRGKRGQQGLAL
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHCCCCCCCHHHH
GRSRGGFPTKIHLKTDLDGHPPDFHLTGGEASDTTEFETSLDIGPDIRPRIAVTDKRYDS
CCCCCCCCEEEEEEECCCCCCCCEEEECCCCCCCCCHHHCCCCCCCCCCCEEECCCHHHH
RANRVAARARGITPVIPRRENSKERGQFFPKRLYRRRARIEQTIGKLKRFKRIAMRCDKT
HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
ATSYAAFISFACALILVKPVHAT
HHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MEQRMEAVLAAEPLRGVRGVLSASRRIQPDRASGAVFRQHNGARPRLRRRGKRGQQGLAL
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHCCCCCCCHHHH
GRSRGGFPTKIHLKTDLDGHPPDFHLTGGEASDTTEFETSLDIGPDIRPRIAVTDKRYDS
CCCCCCCCEEEEEEECCCCCCCCEEEECCCCCCCCCHHHCCCCCCCCCCCEEECCCHHHH
RANRVAARARGITPVIPRRENSKERGQFFPKRLYRRRARIEQTIGKLKRFKRIAMRCDKT
HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
ATSYAAFISFACALILVKPVHAT
HHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA