| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is 148260155
Identifier: 148260155
GI number: 148260155
Start: 1282008
End: 1283207
Strand: Reverse
Name: 148260155
Synonym: Acry_1151
Alternate gene names: NA
Gene position: 1283207-1282008 (Counterclockwise)
Preceding gene: 148260156
Following gene: 148260154
Centisome position: 37.86
GC content: 66.17
Gene sequence:
>1200_bases ATGACGGCCTATATGGCGCAATGGGCGATGGCCCTGCTGATCTGGCTCCACGTGATCGCGGCGATCGCCTGGATCGGCGA ATCCTTCTACTTCGTCATGCTCGACAATGGGCTGAAGTCACCGGCCGAGGCCGAGGCCCGCGAACGCGGCGTGTTCGGCG AGATGTGGTCGGTCCATGGCGGCGGGTTCTACCACGCGCAGAAATATCTCGTCTCGCCCGCGCGCATGCCCGAAGACCTG CACTGGTCGAAGTGGAAATCCTACACGACCTGGCTGTCCGGCTTCGCGCTGTTCACGGTGATGTATCTGCTCCAGCCGGG CATCTATCTGCTCGATCCCTCGGTGGCGCGGATCGCGCCGGGCCTCGGCGTGGCGGCGGCGCTCGGCTTCCTGCTCGTCG GCTGGGTTGTCTATGATGTCCTGTGCCGCGCCTTCGGCGACCGGGATCTGCGGCTCGGCGTCGCCATCGCGGTCTATGTC GGCGCCGCCGCCTTCATCTCGACGCATCTGTTCGCGCCCCAGGCCGCGTTCCTGATCATCGGCGCCATGCTTGGCACGAT CATGACGGCGAATGTCTTCTTCTGGATCATCCCGGGCCAGAGGAAGATGGTCGCGGCGCTCGCCCGCGGCGAAACGCCCG ACCCGCTGCCCGGCAAGCGCGGCAAGCAGCGTTCGGTGCACAACACCTATTTCACGCTGCCGGTCGTCTTCGCCATGCTC AGCAGCCATTTCGGCATGCTGTTCAGCCATCCGGCCAGCTGGATCTATCTCTGGCTGGTCATGGTGGCGGGCGCGCTCAT TCGCCAGTTCTTCGTGCTCTGGCACAAGGGGCAGCGCAATTTCGCCCTGCCGGTCGCCGGCGCGGTGCTGATCGTCCTGG TGATCGTCGCCGTGGCGCCGGGCGCGATGTCGACCGGCGCGTCGGCCGAAGCCGCGGGAGTGCAGGGCAATGTAACCGTC GCCCGGATCGAGCCGATCATCCATGAGCGTTGCGCGGCCTGTCATTCCGCCCATCCGACGCTGATGGCCAGCGCCCCGAA CGGCATCATGTTCGACACGGCGGCCGAGATCCGCTCCAGGGCGTCGCTGATCGAACAGCAGGCGGTGAGCGCGAAGTCGA TGCCGCCCGGCAACGTCACGCACATCACCAGGCGGGAGCGAGAGGAAATCGCCGCCTGGGTGAGGGGAGGTGCCAAATGA
Upstream 100 bases:
>100_bases TCGTGATCCGCTTCGGTCTCCGCGCCGGGGCCGCGCACCTTCATGTCCCGCTGCTGATCTCGCCGTTCGGCTACACGACC TATCGGGGACAATGACGACA
Downstream 100 bases:
>100_bases GCGCCGACGGCCCCGACATCGCCACCCTGAACGCCATGGCGCGGGAGGATTTCGTCGCAGCACTCGGCGATATCTACGAG CATGCCGCGTGGGTCGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Cytochrome C Subfamily; Cytochrome C Region
Number of amino acids: Translated: 399; Mature: 398
Protein sequence:
>399_residues MTAYMAQWAMALLIWLHVIAAIAWIGESFYFVMLDNGLKSPAEAEARERGVFGEMWSVHGGGFYHAQKYLVSPARMPEDL HWSKWKSYTTWLSGFALFTVMYLLQPGIYLLDPSVARIAPGLGVAAALGFLLVGWVVYDVLCRAFGDRDLRLGVAIAVYV GAAAFISTHLFAPQAAFLIIGAMLGTIMTANVFFWIIPGQRKMVAALARGETPDPLPGKRGKQRSVHNTYFTLPVVFAML SSHFGMLFSHPASWIYLWLVMVAGALIRQFFVLWHKGQRNFALPVAGAVLIVLVIVAVAPGAMSTGASAEAAGVQGNVTV ARIEPIIHERCAACHSAHPTLMASAPNGIMFDTAAEIRSRASLIEQQAVSAKSMPPGNVTHITRREREEIAAWVRGGAK
Sequences:
>Translated_399_residues MTAYMAQWAMALLIWLHVIAAIAWIGESFYFVMLDNGLKSPAEAEARERGVFGEMWSVHGGGFYHAQKYLVSPARMPEDL HWSKWKSYTTWLSGFALFTVMYLLQPGIYLLDPSVARIAPGLGVAAALGFLLVGWVVYDVLCRAFGDRDLRLGVAIAVYV GAAAFISTHLFAPQAAFLIIGAMLGTIMTANVFFWIIPGQRKMVAALARGETPDPLPGKRGKQRSVHNTYFTLPVVFAML SSHFGMLFSHPASWIYLWLVMVAGALIRQFFVLWHKGQRNFALPVAGAVLIVLVIVAVAPGAMSTGASAEAAGVQGNVTV ARIEPIIHERCAACHSAHPTLMASAPNGIMFDTAAEIRSRASLIEQQAVSAKSMPPGNVTHITRREREEIAAWVRGGAK >Mature_398_residues TAYMAQWAMALLIWLHVIAAIAWIGESFYFVMLDNGLKSPAEAEARERGVFGEMWSVHGGGFYHAQKYLVSPARMPEDLH WSKWKSYTTWLSGFALFTVMYLLQPGIYLLDPSVARIAPGLGVAAALGFLLVGWVVYDVLCRAFGDRDLRLGVAIAVYVG AAAFISTHLFAPQAAFLIIGAMLGTIMTANVFFWIIPGQRKMVAALARGETPDPLPGKRGKQRSVHNTYFTLPVVFAMLS SHFGMLFSHPASWIYLWLVMVAGALIRQFFVLWHKGQRNFALPVAGAVLIVLVIVAVAPGAMSTGASAEAAGVQGNVTVA RIEPIIHERCAACHSAHPTLMASAPNGIMFDTAAEIRSRASLIEQQAVSAKSMPPGNVTHITRREREEIAAWVRGGAK
Specific function: Unknown
COG id: COG3748
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43440; Mature: 43309
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAYMAQWAMALLIWLHVIAAIAWIGESFYFVMLDNGLKSPAEAEARERGVFGEMWSVHG CCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHCCCCHHHHHCCC GGFYHAQKYLVSPARMPEDLHWSKWKSYTTWLSGFALFTVMYLLQPGIYLLDPSVARIAP CCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHCC GLGVAAALGFLLVGWVVYDVLCRAFGDRDLRLGVAIAVYVGAAAFISTHLFAPQAAFLII CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH GAMLGTIMTANVFFWIIPGQRKMVAALARGETPDPLPGKRGKQRSVHNTYFTLPVVFAML HHHHHHHHHHCEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH SSHFGMLFSHPASWIYLWLVMVAGALIRQFFVLWHKGQRNFALPVAGAVLIVLVIVAVAP HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCC GAMSTGASAEAAGVQGNVTVARIEPIIHERCAACHSAHPTLMASAPNGIMFDTAAEIRSR CCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCEEECCCCCCEECCHHHHHHH ASLIEQQAVSAKSMPPGNVTHITRREREEIAAWVRGGAK HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TAYMAQWAMALLIWLHVIAAIAWIGESFYFVMLDNGLKSPAEAEARERGVFGEMWSVHG CHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHCCCCHHHHHCCC GGFYHAQKYLVSPARMPEDLHWSKWKSYTTWLSGFALFTVMYLLQPGIYLLDPSVARIAP CCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHCC GLGVAAALGFLLVGWVVYDVLCRAFGDRDLRLGVAIAVYVGAAAFISTHLFAPQAAFLII CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH GAMLGTIMTANVFFWIIPGQRKMVAALARGETPDPLPGKRGKQRSVHNTYFTLPVVFAML HHHHHHHHHHCEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH SSHFGMLFSHPASWIYLWLVMVAGALIRQFFVLWHKGQRNFALPVAGAVLIVLVIVAVAP HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCC GAMSTGASAEAAGVQGNVTVARIEPIIHERCAACHSAHPTLMASAPNGIMFDTAAEIRSR CCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCEEECCCCCCEECCHHHHHHH ASLIEQQAVSAKSMPPGNVTHITRREREEIAAWVRGGAK HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA