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The map label for this gene is glxA [H]

Identifier: 148260149

GI number: 148260149

Start: 1275490

End: 1276470

Strand: Reverse

Name: glxA [H]

Synonym: Acry_1145

Alternate gene names: 148260149

Gene position: 1276470-1275490 (Counterclockwise)

Preceding gene: 148260152

Following gene: 148260148

Centisome position: 37.66

GC content: 70.64

Gene sequence:

>981_bases
ATGAATGATCGTGGGATAAGGACGATCCTGGTGCTGGCGATGCCGGGCGTGCAGTTGCTCGACGTCTCCGGACCGCTCGA
CGTCTTCGCGGAGGCAAGCGCCCAGGCCGGGCGGACAGCGTATCGGCTGGAGATCGCCGGGATCGCGCCGGGCCCCATCG
TCAGTTCGTCGGGCGCGCGCCTGATGCCGGACCGCATCGTCGGCGACGGCATGACTGGCGGCAAGATCGACACGCTGCTG
GTCGCGGGCTGTCCCAAAATGCCCGATACGGCGCCGCCGCAGCCGGTGCTGGACTGGCTGCGGCGGGAAGCGCGGCGGGC
ACGGCGCTACGGGTCGGTCTGCAGCGGCGCCTTTCTGCTTGCCCAGGCCGGCCTGCTCGACGGCAAGCGGGCAACCACGC
ATTGGGCGGTGGCGGCGCGGCTCGCGGCGGCGTTCCCCGCAGTCACGCTGGAGACCGACGCGATCCATGTGCGCGACGGC
AAGCTGCGCACCGCCGCCGGCGTCACCGCCGGGCTCGATCTCGCCCTCGCTCTGGTCGAGGAGGATCTCGGCCGCGAGAT
CGCCAAGCGGGTCGCCGCGCAACTGGTGATGTTCTTCAAGCGGCCGGGCGGGCAGTTGCAGTTCAGCCGCAGCGGGGAAT
CGCTGCCCTCCGGTCGCGCCATGTTGCAGGAGGTGCAGCGATATGTCGCGGCAAATCCCGCCGCCGATCTCGATGTCGGC
AGTCTTGCCGCCCGTACCGGCCTCAGCGCCCGGCACTTCGCCAGGCTGTTCCGCAGTGAAACCGGAATGACCCCCGCCAG
CTGGGTGGAATCCGCGCGCGTGACGGCGGCCCGGGAGATGCTCGAAAGTGGCGCGGCCGCGCCGAAGCAGGTCGCGGCGC
GGTGCGGGTTCGCCAATGTCGATACGCTGCGCCGGTCCTTCCAGCGTCATGTGGGGGTAACGCCGGCGGCCTACCGCCGG
CACTTTGGCGGAAGGGCGTAA

Upstream 100 bases:

>100_bases
CTTGACTTGACGGCAAGGAGATCATAACCGAGGCGCTGGATGTCCTCTATCGACGTAACACGTCGAATTCAGACAAAATC
CGTGCGGAAAGGTCGTGGCG

Downstream 100 bases:

>100_bases
CGCGCGGCGCCGGCATTTGGCAAACGCAACCGGCTGTGAGACATTTTTGCGATGAGGCGACGATCGGCATCTACCCGCGA
GGGGCGGCAAGACCTCCTGC

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MNDRGIRTILVLAMPGVQLLDVSGPLDVFAEASAQAGRTAYRLEIAGIAPGPIVSSSGARLMPDRIVGDGMTGGKIDTLL
VAGCPKMPDTAPPQPVLDWLRREARRARRYGSVCSGAFLLAQAGLLDGKRATTHWAVAARLAAAFPAVTLETDAIHVRDG
KLRTAAGVTAGLDLALALVEEDLGREIAKRVAAQLVMFFKRPGGQLQFSRSGESLPSGRAMLQEVQRYVAANPAADLDVG
SLAARTGLSARHFARLFRSETGMTPASWVESARVTAAREMLESGAAAPKQVAARCGFANVDTLRRSFQRHVGVTPAAYRR
HFGGRA

Sequences:

>Translated_326_residues
MNDRGIRTILVLAMPGVQLLDVSGPLDVFAEASAQAGRTAYRLEIAGIAPGPIVSSSGARLMPDRIVGDGMTGGKIDTLL
VAGCPKMPDTAPPQPVLDWLRREARRARRYGSVCSGAFLLAQAGLLDGKRATTHWAVAARLAAAFPAVTLETDAIHVRDG
KLRTAAGVTAGLDLALALVEEDLGREIAKRVAAQLVMFFKRPGGQLQFSRSGESLPSGRAMLQEVQRYVAANPAADLDVG
SLAARTGLSARHFARLFRSETGMTPASWVESARVTAAREMLESGAAAPKQVAARCGFANVDTLRRSFQRHVGVTPAAYRR
HFGGRA
>Mature_326_residues
MNDRGIRTILVLAMPGVQLLDVSGPLDVFAEASAQAGRTAYRLEIAGIAPGPIVSSSGARLMPDRIVGDGMTGGKIDTLL
VAGCPKMPDTAPPQPVLDWLRREARRARRYGSVCSGAFLLAQAGLLDGKRATTHWAVAARLAAAFPAVTLETDAIHVRDG
KLRTAAGVTAGLDLALALVEEDLGREIAKRVAAQLVMFFKRPGGQLQFSRSGESLPSGRAMLQEVQRYVAANPAADLDVG
SLAARTGLSARHFARLFRSETGMTPASWVESARVTAAREMLESGAAAPKQVAARCGFANVDTLRRSFQRHVGVTPAAYRR
HFGGRA

Specific function: Unknown

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 34563; Mature: 34563

Theoretical pI: Translated: 11.01; Mature: 11.01

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDRGIRTILVLAMPGVQLLDVSGPLDVFAEASAQAGRTAYRLEIAGIAPGPIVSSSGAR
CCCCCCEEEEEEECCCCEEEECCCCHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCE
LMPDRIVGDGMTGGKIDTLLVAGCPKMPDTAPPQPVLDWLRREARRARRYGSVCSGAFLL
ECCHHHHCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQAGLLDGKRATTHWAVAARLAAAFPAVTLETDAIHVRDGKLRTAAGVTAGLDLALALVE
HHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCEEEEECCCEEHHHCCHHHHHHHHHHHH
EDLGREIAKRVAAQLVMFFKRPGGQLQFSRSGESLPSGRAMLQEVQRYVAANPAADLDVG
HHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHH
SLAARTGLSARHFARLFRSETGMTPASWVESARVTAAREMLESGAAAPKQVAARCGFANV
HHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCH
DTLRRSFQRHVGVTPAAYRRHFGGRA
HHHHHHHHHHCCCCHHHHHHHCCCCC
>Mature Secondary Structure
MNDRGIRTILVLAMPGVQLLDVSGPLDVFAEASAQAGRTAYRLEIAGIAPGPIVSSSGAR
CCCCCCEEEEEEECCCCEEEECCCCHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCE
LMPDRIVGDGMTGGKIDTLLVAGCPKMPDTAPPQPVLDWLRREARRARRYGSVCSGAFLL
ECCHHHHCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQAGLLDGKRATTHWAVAARLAAAFPAVTLETDAIHVRDGKLRTAAGVTAGLDLALALVE
HHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCEEEEECCCEEHHHCCHHHHHHHHHHHH
EDLGREIAKRVAAQLVMFFKRPGGQLQFSRSGESLPSGRAMLQEVQRYVAANPAADLDVG
HHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHH
SLAARTGLSARHFARLFRSETGMTPASWVESARVTAAREMLESGAAAPKQVAARCGFANV
HHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCH
DTLRRSFQRHVGVTPAAYRRHFGGRA
HHHHHHHHHHCCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]