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The map label for this gene is ydgJ [H]

Identifier: 148260127

GI number: 148260127

Start: 1252318

End: 1253367

Strand: Reverse

Name: ydgJ [H]

Synonym: Acry_1123

Alternate gene names: 148260127

Gene position: 1253367-1252318 (Counterclockwise)

Preceding gene: 148260128

Following gene: 148260126

Centisome position: 36.98

GC content: 71.71

Gene sequence:

>1050_bases
ATGGCCGACGACGAACGACATATCCGCGCGGGGCTGATCGGCTACGGCTATGCCGGCCGCACGTTTCACGCCCCGCTCAT
CAGGGCCACGGCCGGCTATTCGCTCGTCGCGGTCGCCTCAAGCGATGCGGCGAAAGTGCAGGCCGACCTGCCCGGCATCG
CGGTCGAGCAGGCCCCCGCCGCGCTCCTCCGGCGCGACGATATCGACCTCGTCGTCATCGCCACGCCGAACGACTCGCAT
CGCCCGCTCGCCGAAATGGCCCTCGCCGCCGGCAAGCATGTCGTCGTCGACAAGCCTTTTGCCCTCTCGCACGCCGATGC
GCAGGCCGTGGTCGCAGCGGCCGAAGCGGCGCATCGCCATGTCGCGGTCTTCCAGAACCGCCGTTGGGACAGCGATTTCC
TCGCCATCCGCCAGGCGATCGAAACCGGCCGCATCGGCGCGGTCCGCCACTTCGAATCCCATGTCGACCGATTCCGCCCC
CAGGTCCGCCCACGCTGGCGCGAGGCGGCGGGCCCCGGCGCCGGGCTCTGGCTCGATCTCGGTCCGCATCTCGTCGACCA
GGCGCTCTGCCTGTTCGGATCTCCGTCGCGGGTCATCGCGAGTTTCGCCGCCCAGCGGCAGGGCGCCACGGTCGAGGACT
GGGCGCATGTCGTCCTCGAATATCCCGCCCTGCGCGTGATCCTGCACGCCGGCATGCTGGCGGCCGGCGGATCGCATCGC
TTCACCGTCCACGGCGAGACGGGAACCCTGGTCAAGCGCGCGGCCGATCGGCAGGAAGACCAGCTTCGCGCCGGCATGAT
CCCCGGCGCGCCCGGCTGGGGCGAGGATCCCGACGATTTGCTCCTCCTCGACGGCGCCAGCCCCCCGCTTTCCTTGCCCG
CGCCGGCCGGCGACCACCGGGCATTCTACGCGGCGCTGCGCGAGGCGCTGCTCGGCCGCGCGCCGAATCCCGTGCGGCCT
GACGAGGCGCTCGCGGTCATGGCGGTTCTCGACGCCGCCGCCCGCGCCGCATCGACCGGCAACGCCGCCGTTCCCGTTTC
AGGCGCATAG

Upstream 100 bases:

>100_bases
CGATCCTGACCGCGGTCGCATAGCCGCGCCCGGCGCTTGACGATCATCCCCCGCCGCTGCAATCGCCATCCTGCAACCGC
ATCGTGACGGAGACGACGGG

Downstream 100 bases:

>100_bases
CGGATCATCGGCTTCCGGCGCCCATGCCGGCGCGTTGATTTCCCTCAATGCCGCACGCCGCCGGGCATGGGATCGATAGG
TCTCACAGCGCGATCGGGCT

Product: oxidoreductase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 348

Protein sequence:

>349_residues
MADDERHIRAGLIGYGYAGRTFHAPLIRATAGYSLVAVASSDAAKVQADLPGIAVEQAPAALLRRDDIDLVVIATPNDSH
RPLAEMALAAGKHVVVDKPFALSHADAQAVVAAAEAAHRHVAVFQNRRWDSDFLAIRQAIETGRIGAVRHFESHVDRFRP
QVRPRWREAAGPGAGLWLDLGPHLVDQALCLFGSPSRVIASFAAQRQGATVEDWAHVVLEYPALRVILHAGMLAAGGSHR
FTVHGETGTLVKRAADRQEDQLRAGMIPGAPGWGEDPDDLLLLDGASPPLSLPAPAGDHRAFYAALREALLGRAPNPVRP
DEALAVMAVLDAAARAASTGNAAVPVSGA

Sequences:

>Translated_349_residues
MADDERHIRAGLIGYGYAGRTFHAPLIRATAGYSLVAVASSDAAKVQADLPGIAVEQAPAALLRRDDIDLVVIATPNDSH
RPLAEMALAAGKHVVVDKPFALSHADAQAVVAAAEAAHRHVAVFQNRRWDSDFLAIRQAIETGRIGAVRHFESHVDRFRP
QVRPRWREAAGPGAGLWLDLGPHLVDQALCLFGSPSRVIASFAAQRQGATVEDWAHVVLEYPALRVILHAGMLAAGGSHR
FTVHGETGTLVKRAADRQEDQLRAGMIPGAPGWGEDPDDLLLLDGASPPLSLPAPAGDHRAFYAALREALLGRAPNPVRP
DEALAVMAVLDAAARAASTGNAAVPVSGA
>Mature_348_residues
ADDERHIRAGLIGYGYAGRTFHAPLIRATAGYSLVAVASSDAAKVQADLPGIAVEQAPAALLRRDDIDLVVIATPNDSHR
PLAEMALAAGKHVVVDKPFALSHADAQAVVAAAEAAHRHVAVFQNRRWDSDFLAIRQAIETGRIGAVRHFESHVDRFRPQ
VRPRWREAAGPGAGLWLDLGPHLVDQALCLFGSPSRVIASFAAQRQGATVEDWAHVVLEYPALRVILHAGMLAAGGSHRF
TVHGETGTLVKRAADRQEDQLRAGMIPGAPGWGEDPDDLLLLDGASPPLSLPAPAGDHRAFYAALREALLGRAPNPVRPD
EALAVMAVLDAAARAASTGNAAVPVSGA

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI87081947, Length=335, Percent_Identity=48.0597014925373, Blast_Score=312, Evalue=2e-86,
Organism=Escherichia coli, GI1789848, Length=341, Percent_Identity=32.258064516129, Blast_Score=167, Evalue=1e-42,
Organism=Escherichia coli, GI1787574, Length=195, Percent_Identity=26.6666666666667, Blast_Score=62, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 36891; Mature: 36760

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADDERHIRAGLIGYGYAGRTFHAPLIRATAGYSLVAVASSDAAKVQADLPGIAVEQAPA
CCCCHHHHHHCEEEECCCCCEECCHHHHHCCCCEEEEEECCCCCEEEECCCCCCHHHHHH
ALLRRDDIDLVVIATPNDSHRPLAEMALAAGKHVVVDKPFALSHADAQAVVAAAEAAHRH
HHHHCCCCCEEEEECCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHH
VAVFQNRRWDSDFLAIRQAIETGRIGAVRHFESHVDRFRPQVRPRWREAAGPGAGLWLDL
HHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCCCEEEEEC
GPHLVDQALCLFGSPSRVIASFAAQRQGATVEDWAHVVLEYPALRVILHAGMLAAGGSHR
CHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
FTVHGETGTLVKRAADRQEDQLRAGMIPGAPGWGEDPDDLLLLDGASPPLSLPAPAGDHR
EEEECCCCHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHH
AFYAALREALLGRAPNPVRPDEALAVMAVLDAAARAASTGNAAVPVSGA
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEECCCCC
>Mature Secondary Structure 
ADDERHIRAGLIGYGYAGRTFHAPLIRATAGYSLVAVASSDAAKVQADLPGIAVEQAPA
CCCHHHHHHCEEEECCCCCEECCHHHHHCCCCEEEEEECCCCCEEEECCCCCCHHHHHH
ALLRRDDIDLVVIATPNDSHRPLAEMALAAGKHVVVDKPFALSHADAQAVVAAAEAAHRH
HHHHCCCCCEEEEECCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHH
VAVFQNRRWDSDFLAIRQAIETGRIGAVRHFESHVDRFRPQVRPRWREAAGPGAGLWLDL
HHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCCCEEEEEC
GPHLVDQALCLFGSPSRVIASFAAQRQGATVEDWAHVVLEYPALRVILHAGMLAAGGSHR
CHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
FTVHGETGTLVKRAADRQEDQLRAGMIPGAPGWGEDPDDLLLLDGASPPLSLPAPAGDHR
EEEECCCCHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHH
AFYAALREALLGRAPNPVRPDEALAVMAVLDAAARAASTGNAAVPVSGA
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]