| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is yrbG [C]
Identifier: 148260126
GI number: 148260126
Start: 1251109
End: 1252125
Strand: Reverse
Name: yrbG [C]
Synonym: Acry_1122
Alternate gene names: 148260126
Gene position: 1252125-1251109 (Counterclockwise)
Preceding gene: 148260127
Following gene: 148260125
Centisome position: 36.94
GC content: 67.35
Gene sequence:
>1017_bases ATGACGGCCGCCGAAATCTGGCTCGCCTTCTTCGCCTGCCTCGCGCTGGTCGGCGCTGCCGGGCCGGTGCTGTCGCGCAA CGGCGATATCATCGCGGTGAAGACGGGCCTGACCGGCGGCTGGATCGGCCTGATCCTCGTCGCCGCCATCACCTCGCTGC CCGAACTCGCGACCGGCCTCAGCGCCGTGACCATCGCCAACGCGCCGGACACCGCGGTGGGCGATGTCTTCGGCAGTTGC GTCTTCAACCTCGCGATCCTGATCGTGCTCGACTTCATGCAACGCGGCGAGAGCGTCTACCGCCGGGTGCGCCAGGGGCA CATCCTCTCCGCCGGCTTCGGCGTCGTGCTGATCGGCTTCGTCGGCATGAACATCGCCCTGCACGGCCAGGGCATGGCCT TCGCCGCATTCGGGGTCGGCGGCTACACGCCGATCATCTTCCTGCTTTACGCGCTCGGCGCCCGCGCCGTCTTCTTCTAC GAGCGCGACCACCGCGAGGACGCCGCCGAAGACGCGGCCGACCGCTATGCCGGAACCACGCTCGGCACGGCGGTCCGCAG CTATGCGCTCGCTTCGGCGGTCGTCGTCGTCACCGGCACGGCGCTGCCATTCGTCGCCGTGGCGCTGGCCGCGGCGATGG GCTGGCAACAGACCTTCGTCGGCACGCTGCTGGTCGCCGCCGTCACCTCGCTGCCGGAACTGGTGGTCAGCGTCGTCGCC GTCCGCATCGGCGCCGTGGACATGGCGATGGCGAACCTGCTCGGCAGCAACATGTTCAACATCCTCATCCTCGGCATCGA CGACCTGTTCTACCGGCAGGGCCCGATCCTCTACCGGGTCTCGCCGGTGCATGTCGTGTCGGCGCTGTCCGCCGTCATCA TGTCGGGCCTGCTGATCGCCGGCATATTGTATCGCCCGCAGCGGCGCATCTTCCAAACCGTCGGCTGGATCAGCTTCGGC CTGTTCACGATGTATCTGCTGAATTCCTATGTGATCTTCCTCCATGGCACGCACTGA
Upstream 100 bases:
>100_bases ATCGGGCTTCGGACATGTCGAGCAGCGAGCGGAAGCCGCCCTGTCCCGCCTCCCTCGGGACCGACGGTGGACGGACCATC CCCTTCGGGCGCGCCCGGCG
Downstream 100 bases:
>100_bases CGAACACGGCGCCGGGCCCGAAACCGCTGATGCCGTGCGCTGGCACGCGCTCGGCCCCGACGCCGTGCTGGCCCGTCTCG GCAGCGACGCGGCGCAGGGC
Product: sodium/calcium exchanger membrane region
Products: Na (I) [Cytoplasm]; Ca (II) [Periplasm] [C]
Alternate protein names: Cation Antiporter; Cation Transporter; Sodium-Calcium Exchanger; Sodium/Calcium Antiporter; Sodium/Calcium Exchanger Membrane Protein; Sodium/Calcium Exchanger Protein; Ca2+Cation Antiporter CaCA Family; Ca2+/Na+ Antiporter; Ca2+/H+ Antiporter
Number of amino acids: Translated: 338; Mature: 337
Protein sequence:
>338_residues MTAAEIWLAFFACLALVGAAGPVLSRNGDIIAVKTGLTGGWIGLILVAAITSLPELATGLSAVTIANAPDTAVGDVFGSC VFNLAILIVLDFMQRGESVYRRVRQGHILSAGFGVVLIGFVGMNIALHGQGMAFAAFGVGGYTPIIFLLYALGARAVFFY ERDHREDAAEDAADRYAGTTLGTAVRSYALASAVVVVTGTALPFVAVALAAAMGWQQTFVGTLLVAAVTSLPELVVSVVA VRIGAVDMAMANLLGSNMFNILILGIDDLFYRQGPILYRVSPVHVVSALSAVIMSGLLIAGILYRPQRRIFQTVGWISFG LFTMYLLNSYVIFLHGTH
Sequences:
>Translated_338_residues MTAAEIWLAFFACLALVGAAGPVLSRNGDIIAVKTGLTGGWIGLILVAAITSLPELATGLSAVTIANAPDTAVGDVFGSC VFNLAILIVLDFMQRGESVYRRVRQGHILSAGFGVVLIGFVGMNIALHGQGMAFAAFGVGGYTPIIFLLYALGARAVFFY ERDHREDAAEDAADRYAGTTLGTAVRSYALASAVVVVTGTALPFVAVALAAAMGWQQTFVGTLLVAAVTSLPELVVSVVA VRIGAVDMAMANLLGSNMFNILILGIDDLFYRQGPILYRVSPVHVVSALSAVIMSGLLIAGILYRPQRRIFQTVGWISFG LFTMYLLNSYVIFLHGTH >Mature_337_residues TAAEIWLAFFACLALVGAAGPVLSRNGDIIAVKTGLTGGWIGLILVAAITSLPELATGLSAVTIANAPDTAVGDVFGSCV FNLAILIVLDFMQRGESVYRRVRQGHILSAGFGVVLIGFVGMNIALHGQGMAFAAFGVGGYTPIIFLLYALGARAVFFYE RDHREDAAEDAADRYAGTTLGTAVRSYALASAVVVVTGTALPFVAVALAAAMGWQQTFVGTLLVAAVTSLPELVVSVVAV RIGAVDMAMANLLGSNMFNILILGIDDLFYRQGPILYRVSPVHVVSALSAVIMSGLLIAGILYRPQRRIFQTVGWISFGL FTMYLLNSYVIFLHGTH
Specific function: Unknown
COG id: COG0530
COG function: function code P; Ca2+/Na+ antiporter
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35653; Mature: 35522
Theoretical pI: Translated: 7.14; Mature: 7.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAAEIWLAFFACLALVGAAGPVLSRNGDIIAVKTGLTGGWIGLILVAAITSLPELATGL CCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCC SAVTIANAPDTAVGDVFGSCVFNLAILIVLDFMQRGESVYRRVRQGHILSAGFGVVLIGF CEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHH VGMNIALHGQGMAFAAFGVGGYTPIIFLLYALGARAVFFYERDHREDAAEDAADRYAGTT HHCCEEEECCCCEEEEECCCCHHHHHHHHHHHCCCEEEEEEHHCHHHHHHHHHHHHCCHH LGTAVRSYALASAVVVVTGTALPFVAVALAAAMGWQQTFVGTLLVAAVTSLPELVVSVVA HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH VRIGAVDMAMANLLGSNMFNILILGIDDLFYRQGPILYRVSPVHVVSALSAVIMSGLLIA HHHHHHHHHHHHHHCCCCCEEEEECHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHH GILYRPQRRIFQTVGWISFGLFTMYLLNSYVIFLHGTH HHHHCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCC >Mature Secondary Structure TAAEIWLAFFACLALVGAAGPVLSRNGDIIAVKTGLTGGWIGLILVAAITSLPELATGL CHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCC SAVTIANAPDTAVGDVFGSCVFNLAILIVLDFMQRGESVYRRVRQGHILSAGFGVVLIGF CEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHH VGMNIALHGQGMAFAAFGVGGYTPIIFLLYALGARAVFFYERDHREDAAEDAADRYAGTT HHCCEEEECCCCEEEEECCCCHHHHHHHHHHHCCCEEEEEEHHCHHHHHHHHHHHHCCHH LGTAVRSYALASAVVVVTGTALPFVAVALAAAMGWQQTFVGTLLVAAVTSLPELVVSVVA HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH VRIGAVDMAMANLLGSNMFNILILGIDDLFYRQGPILYRVSPVHVVSALSAVIMSGLLIA HHHHHHHHHHHHHHCCCCCEEEEECHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHH GILYRPQRRIFQTVGWISFGLFTMYLLNSYVIFLHGTH HHHHCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Na (I) [Periplasm]; Ca (II) [Cytoplasm] [C]
Specific reaction: Na (I) [Periplasm] + Ca (II) [Cytoplasm] = Na (I) [Cytoplasm] + Ca (II) [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA