| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is nuoH1 [H]
Identifier: 148260118
GI number: 148260118
Start: 1239931
End: 1240902
Strand: Reverse
Name: nuoH1 [H]
Synonym: Acry_1114
Alternate gene names: 148260118
Gene position: 1240902-1239931 (Counterclockwise)
Preceding gene: 148260119
Following gene: 148260117
Centisome position: 36.61
GC content: 65.02
Gene sequence:
>972_bases ATGACCCACGGCAACGAGATCGTCATCGGCCTGCTGAACGTCGTGATCGGCCTCGCGGTGCTGATGGCGGCCGCCGCGCT GCTGACCTGGATCGAACGCCGCCTGCTCGGGTTCTGGCAGGACCGTTACGGCCCCAACCGCGCCGGCCCCTTCGGCGTGC TCCAGGTCGTCGCCGACGGCATCAAGCTGCTCTTCAAGCAGGACTGGATTCCCCCCTTCGCCGACCCGGTCATCTTCGTC CTCGCCCCGGCCATCTCGATGGTCACGGTGATGCTCGCCATCGCGGTCGTCCCGGCGACGCCGATGATCGGCATCATCGG CAATCTCAATGTCGGCCTGCTGTTCTTCCTCGCCATGAGCGGGCTCGGCGTCTACTCGGTGGTGCTCGCCGGCTGGTCGT CGAACAACAAGTTCTCGCTCCTCGGCGGCATGCGCGCCGCCGCCCAGATGGTCAGCTACGAGGTCTTCATGGGGCTGTCG CTGGTGGGCGTGGTGATGCTCGCCGGCTCCTTCAACCTCACCGATGTCGTGCACAGCCAGCGGCATCTCTGGTACGTGGT GCCGCAATTCATCGGCTTCGTCGTCTTCTTCCTCGGCGGCATCGCGGAAACCCACCGCCTCCCGTTCGACCTGCCCGAAG GCGAGAACGAACTCGGCGCCGGGTTCCACACCGAATATTCCGGCATGAAGTTCGGCATGTTCTTCGTCGGCGAATATATC GGCATCATCGTCGTCTCGGCGATGACGACGGTGCTGTTCCTCGGCGGCTGGTATGGCCCGCTGCTGCCGCCCTTCCTCTG GTTCGCGATCAAGACCGGGTTTTTCGTCGCCTTCTTCATCCTGCTGCGCGCCGCCCTGCCGCGCCCGCGCTACGACCAGT TCATGGCGTTCGGCTGGAAGATCCTGCTGCCGCTCACCTTGCTGAACATTCTCGTCACCGGCGCGCTCATGCTCGCCGGG CCGGCCATATGA
Upstream 100 bases:
>100_bases CCGCCCTGCCGCGCGGCGTCGCCGGGCTCGCCGGCTTCGCGCAGAGGCCGCACGCCATCCCCGCATGGCTGCGGCTGCGC CCGGCGGAGCCGCCCGTGTC
Downstream 100 bases:
>100_bases AGGGGAGGGGATCATGCTGAGTTCGCTGGTCACGCTCTGGTACACGTTCCTCCACCTGTTCCAGCGCAACGTGACGGTAT CCTATCCCGACGAGATGCCC
Product: NADH dehydrogenase subunit H
Products: NA
Alternate protein names: NADH dehydrogenase I subunit H 1; NDH-1 subunit H 1 [H]
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MTHGNEIVIGLLNVVIGLAVLMAAAALLTWIERRLLGFWQDRYGPNRAGPFGVLQVVADGIKLLFKQDWIPPFADPVIFV LAPAISMVTVMLAIAVVPATPMIGIIGNLNVGLLFFLAMSGLGVYSVVLAGWSSNNKFSLLGGMRAAAQMVSYEVFMGLS LVGVVMLAGSFNLTDVVHSQRHLWYVVPQFIGFVVFFLGGIAETHRLPFDLPEGENELGAGFHTEYSGMKFGMFFVGEYI GIIVVSAMTTVLFLGGWYGPLLPPFLWFAIKTGFFVAFFILLRAALPRPRYDQFMAFGWKILLPLTLLNILVTGALMLAG PAI
Sequences:
>Translated_323_residues MTHGNEIVIGLLNVVIGLAVLMAAAALLTWIERRLLGFWQDRYGPNRAGPFGVLQVVADGIKLLFKQDWIPPFADPVIFV LAPAISMVTVMLAIAVVPATPMIGIIGNLNVGLLFFLAMSGLGVYSVVLAGWSSNNKFSLLGGMRAAAQMVSYEVFMGLS LVGVVMLAGSFNLTDVVHSQRHLWYVVPQFIGFVVFFLGGIAETHRLPFDLPEGENELGAGFHTEYSGMKFGMFFVGEYI GIIVVSAMTTVLFLGGWYGPLLPPFLWFAIKTGFFVAFFILLRAALPRPRYDQFMAFGWKILLPLTLLNILVTGALMLAG PAI >Mature_322_residues THGNEIVIGLLNVVIGLAVLMAAAALLTWIERRLLGFWQDRYGPNRAGPFGVLQVVADGIKLLFKQDWIPPFADPVIFVL APAISMVTVMLAIAVVPATPMIGIIGNLNVGLLFFLAMSGLGVYSVVLAGWSSNNKFSLLGGMRAAAQMVSYEVFMGLSL VGVVMLAGSFNLTDVVHSQRHLWYVVPQFIGFVVFFLGGIAETHRLPFDLPEGENELGAGFHTEYSGMKFGMFFVGEYIG IIVVSAMTTVLFLGGWYGPLLPPFLWFAIKTGFFVAFFILLRAALPRPRYDQFMAFGWKILLPLTLLNILVTGALMLAGP AI
Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat
COG id: COG1005
COG function: function code C; NADH:ubiquinone oxidoreductase subunit 1 (chain H)
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the complex I subunit 1 family [H]
Homologues:
Organism=Homo sapiens, GI251831107, Length=286, Percent_Identity=41.958041958042, Blast_Score=224, Evalue=6e-59, Organism=Escherichia coli, GI1788618, Length=313, Percent_Identity=61.6613418530351, Blast_Score=407, Evalue=1e-115, Organism=Escherichia coli, GI1789077, Length=237, Percent_Identity=32.4894514767932, Blast_Score=77, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023020 - InterPro: IPR001694 - InterPro: IPR018086 [H]
Pfam domain/function: PF00146 NADHdh [H]
EC number: =1.6.99.5 [H]
Molecular weight: Translated: 35183; Mature: 35051
Theoretical pI: Translated: 7.87; Mature: 7.87
Prosite motif: PS00667 COMPLEX1_ND1_1 ; PS00668 COMPLEX1_ND1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHGNEIVIGLLNVVIGLAVLMAAAALLTWIERRLLGFWQDRYGPNRAGPFGVLQVVADG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH IKLLFKQDWIPPFADPVIFVLAPAISMVTVMLAIAVVPATPMIGIIGNLNVGLLFFLAMS HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHH GLGVYSVVLAGWSSNNKFSLLGGMRAAAQMVSYEVFMGLSLVGVVMLAGSFNLTDVVHSQ CCHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCC RHLWYVVPQFIGFVVFFLGGIAETHRLPFDLPEGENELGAGFHTEYSGMKFGMFFVGEYI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH GIIVVSAMTTVLFLGGWYGPLLPPFLWFAIKTGFFVAFFILLRAALPRPRYDQFMAFGWK HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH ILLPLTLLNILVTGALMLAGPAI HHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure THGNEIVIGLLNVVIGLAVLMAAAALLTWIERRLLGFWQDRYGPNRAGPFGVLQVVADG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH IKLLFKQDWIPPFADPVIFVLAPAISMVTVMLAIAVVPATPMIGIIGNLNVGLLFFLAMS HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHH GLGVYSVVLAGWSSNNKFSLLGGMRAAAQMVSYEVFMGLSLVGVVMLAGSFNLTDVVHSQ CCHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCC RHLWYVVPQFIGFVVFFLGGIAETHRLPFDLPEGENELGAGFHTEYSGMKFGMFFVGEYI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH GIIVVSAMTTVLFLGGWYGPLLPPFLWFAIKTGFFVAFFILLRAALPRPRYDQFMAFGWK HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH ILLPLTLLNILVTGALMLAGPAI HHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA