| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is trmB [H]
Identifier: 148260061
GI number: 148260061
Start: 1174273
End: 1174977
Strand: Reverse
Name: trmB [H]
Synonym: Acry_1053
Alternate gene names: 148260061
Gene position: 1174977-1174273 (Counterclockwise)
Preceding gene: 148260062
Following gene: 148260060
Centisome position: 34.67
GC content: 67.8
Gene sequence:
>705_bases TTGGCCGCTGAGGAGACGGTTGAGGAGACGGCGGGCGGCAAGGCGCTGAAGCCGCCGCCCGACCGGCTCTATGGCCGCGC CCGCGGCCACGCGCTGCGGGCGCGCCAGGAGGAGCTGATCGAGACGTTGCTGCCGCGCCTGCGCTGGCCGGAGCGGAACT TCGCCATCGCGCCGAAGGAACTCTGGCTCGAGGTCGGCGCCGGCGGGTTTGAGCATGCCGAGGCGATCGCCGCGGCCAAT CCCGAAATCGGCCTTGTCGCCTGCGAGGTGTTCGTCAACTGCATCGCCTCGCTGCTCTCGCGCCTCGCCCCCGAGGGTGT CGAGCCGACAATCCCGCCCAACCTGCGCGTGCACGACGACGACGCCCGCGCCCTGCTGCGCACCCTGCCGGCGGGATCGG TCTCGCGCCTGTTCCTGATGTTCCCCGATCCCTGGCCGAAGGCGCGCCACGCGAAGCGGCGGTTCGTCCATCCGGCGATC CTCGCCGAGGTCGCCCGCGTGCTCCGGCCGGGCGGGCTGTGGCGGATCGCCAGCGACGACCCGACCTATCAACAATGGGT TGAGGAAGTATTTTCTAACGCAGAGGCATTTTCTTTGTTAAGTAAATCCGGAATTCGCCCCCCGGACTGGCCGCCGACCC GATATGAAGCCAAGGCCATCAAGGCAGGGCGCCAGCCGCACTACTGGACATTTGTTGTAAAATAG
Upstream 100 bases:
>100_bases CCGACCTCCGCCTACGGCCATTTCGGCCGCGAGCCGGACGACCGGCTGGGCACCTTCACCTGGGAGAAGACCGACCTCGC GCCGGCGCTGAAGGCCGCGT
Downstream 100 bases:
>100_bases CCTGTCAATTCGACGTTTTACGACCTCCGGGCTGTTGACAGATCAGGTATGCAGGATAAAACCGGAATGTGACGTGCGGT TGCCACGATATAACCGGGGT
Product: tRNA (guanine-N(7)-)-methyltransferase
Products: NA
Alternate protein names: tRNA(m7G46)-methyltransferase [H]
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MAAEETVEETAGGKALKPPPDRLYGRARGHALRARQEELIETLLPRLRWPERNFAIAPKELWLEVGAGGFEHAEAIAAAN PEIGLVACEVFVNCIASLLSRLAPEGVEPTIPPNLRVHDDDARALLRTLPAGSVSRLFLMFPDPWPKARHAKRRFVHPAI LAEVARVLRPGGLWRIASDDPTYQQWVEEVFSNAEAFSLLSKSGIRPPDWPPTRYEAKAIKAGRQPHYWTFVVK
Sequences:
>Translated_234_residues MAAEETVEETAGGKALKPPPDRLYGRARGHALRARQEELIETLLPRLRWPERNFAIAPKELWLEVGAGGFEHAEAIAAAN PEIGLVACEVFVNCIASLLSRLAPEGVEPTIPPNLRVHDDDARALLRTLPAGSVSRLFLMFPDPWPKARHAKRRFVHPAI LAEVARVLRPGGLWRIASDDPTYQQWVEEVFSNAEAFSLLSKSGIRPPDWPPTRYEAKAIKAGRQPHYWTFVVK >Mature_233_residues AAEETVEETAGGKALKPPPDRLYGRARGHALRARQEELIETLLPRLRWPERNFAIAPKELWLEVGAGGFEHAEAIAAANP EIGLVACEVFVNCIASLLSRLAPEGVEPTIPPNLRVHDDDARALLRTLPAGSVSRLFLMFPDPWPKARHAKRRFVHPAIL AEVARVLRPGGLWRIASDDPTYQQWVEEVFSNAEAFSLLSKSGIRPPDWPPTRYEAKAIKAGRQPHYWTFVVK
Specific function: Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA [H]
COG id: COG0220
COG function: function code R; Predicted S-adenosylmethionine-dependent methyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. TrmB family [H]
Homologues:
Organism=Escherichia coli, GI1789330, Length=165, Percent_Identity=33.3333333333333, Blast_Score=78, Evalue=5e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003358 [H]
Pfam domain/function: PF02390 Methyltransf_4 [H]
EC number: =2.1.1.33 [H]
Molecular weight: Translated: 26129; Mature: 25998
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAEETVEETAGGKALKPPPDRLYGRARGHALRARQEELIETLLPRLRWPERNFAIAPKE CCCHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH LWLEVGAGGFEHAEAIAAANPEIGLVACEVFVNCIASLLSRLAPEGVEPTIPPNLRVHDD HHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCH DARALLRTLPAGSVSRLFLMFPDPWPKARHAKRRFVHPAILAEVARVLRPGGLWRIASDD HHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCEEEECCCC PTYQQWVEEVFSNAEAFSLLSKSGIRPPDWPPTRYEAKAIKAGRQPHYWTFVVK CHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEEC >Mature Secondary Structure AAEETVEETAGGKALKPPPDRLYGRARGHALRARQEELIETLLPRLRWPERNFAIAPKE CCHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH LWLEVGAGGFEHAEAIAAANPEIGLVACEVFVNCIASLLSRLAPEGVEPTIPPNLRVHDD HHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCH DARALLRTLPAGSVSRLFLMFPDPWPKARHAKRRFVHPAILAEVARVLRPGGLWRIASDD HHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCEEEECCCC PTYQQWVEEVFSNAEAFSLLSKSGIRPPDWPPTRYEAKAIKAGRQPHYWTFVVK CHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA