| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is metK
Identifier: 148260062
GI number: 148260062
Start: 1174967
End: 1176154
Strand: Reverse
Name: metK
Synonym: Acry_1054
Alternate gene names: 148260062
Gene position: 1176154-1174967 (Counterclockwise)
Preceding gene: 148260063
Following gene: 148260061
Centisome position: 34.7
GC content: 67.85
Gene sequence:
>1188_bases ATGCGCGACAAAGGTGACTACCTGTTCACCTCGGAATCGGTCTCCGAGGGCCACCCCGACAAGGTTGCCGACCGGATTTC GGACACGGTGCTCGACGCCTTCCTGGCGGCGGATCCCTATGCGCGCGTCGCCTGCGAAACGCTGGTGACGACCAACCGCA TCGTGCTCGCCGGCGAAACCCGCGGCCCCTCGACCATCACCCGCGAATATCTCGCCCATCTCGCCCGCCTCGCCGTGCAT GACATCGGCTACGAGCAGGAAGGCTTCTCCTGGCGCGACGCGAAGATCGACGTGCTGCTGCACGAGCAGTCGGTCGATAT CGCCGTCGGCGTCGACGCCGCCGGCAACAAGGACGAGGGCGCGGGCGACCAGGGCATCATGTTCGGCTATGCCTGCTCCG AGACCGACGCGCTGATGCCGGCGCCGATCTATTACGCCCACCTGATCCTCCGCCGCATGACCGAGCTGCGCAAGATCGGC GATGCCCGCGCCGCCGGCCTGCTGCCGGACGCCAAGAGCCAGGTCACCCTGCGCTATGCCGATGGCAAGCCGGTCGGCAC CACCTCGATCGTGGTCTCGACCCAGCACGAGGACGGGATGAGCCAGGACGAGATCAAGGCGATGCTCCGCCCGCTCGTCA CCGAGCTGCTGCCCGATGGCTGGATGTGCCCGGACGATCAGTTTTACGTGAACCCGACGGGCAAGTTCGTCATCGGCGGG CCGGACGGCGATTGCGGCCTGACCGGGCGCAAGATCATCGTCGACACCTATGGCGGCGCGGCCCCGCATGGCGGCGGCGC CTTCTCCGGCAAGGACCCGACCAAGGTCGACCGTTCCGCCGCCTACATGTGCCGCTACCTCGCGAAGAACGTGGTCGCCG CCGGCCTCGCCACCCGCTGCACCATCCAGGTCAGCTACGCGATCGGCGTGTCGCACCCGCTTTCGGTCTATGTCGACATG CACGGCACCGAGCGGGACGTCGATCACGCCAGGCTCGAAACCGTGCTGCGCGAACTGGTGAACCTCACCCCGCGCGGCAT CCGCGAGCATCTGCACCTCAACCGGCCGATCTACGTGCCGACCTCCGCCTACGGCCATTTCGGCCGCGAGCCGGACGACC GGCTGGGCACCTTCACCTGGGAGAAGACCGACCTCGCGCCGGCGCTGAAGGCCGCGTTTGGCCGCTGA
Upstream 100 bases:
>100_bases CCCCCGGGCGCGATTGCGCCATGCCCCGGCACGCTCCGGCATTCGGCCGGCGCCGCCGCCCGGCCCGGGCACGACGTCTT CGCGACAAGAGGAGAAATCC
Downstream 100 bases:
>100_bases GGAGACGGTTGAGGAGACGGCGGGCGGCAAGGCGCTGAAGCCGCCGCCCGACCGGCTCTATGGCCGCGCCCGCGGCCACG CGCTGCGGGCGCGCCAGGAG
Product: S-adenosylmethionine synthetase
Products: NA
Alternate protein names: AdoMet synthase; MAT; Methionine adenosyltransferase
Number of amino acids: Translated: 395; Mature: 395
Protein sequence:
>395_residues MRDKGDYLFTSESVSEGHPDKVADRISDTVLDAFLAADPYARVACETLVTTNRIVLAGETRGPSTITREYLAHLARLAVH DIGYEQEGFSWRDAKIDVLLHEQSVDIAVGVDAAGNKDEGAGDQGIMFGYACSETDALMPAPIYYAHLILRRMTELRKIG DARAAGLLPDAKSQVTLRYADGKPVGTTSIVVSTQHEDGMSQDEIKAMLRPLVTELLPDGWMCPDDQFYVNPTGKFVIGG PDGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPTKVDRSAAYMCRYLAKNVVAAGLATRCTIQVSYAIGVSHPLSVYVDM HGTERDVDHARLETVLRELVNLTPRGIREHLHLNRPIYVPTSAYGHFGREPDDRLGTFTWEKTDLAPALKAAFGR
Sequences:
>Translated_395_residues MRDKGDYLFTSESVSEGHPDKVADRISDTVLDAFLAADPYARVACETLVTTNRIVLAGETRGPSTITREYLAHLARLAVH DIGYEQEGFSWRDAKIDVLLHEQSVDIAVGVDAAGNKDEGAGDQGIMFGYACSETDALMPAPIYYAHLILRRMTELRKIG DARAAGLLPDAKSQVTLRYADGKPVGTTSIVVSTQHEDGMSQDEIKAMLRPLVTELLPDGWMCPDDQFYVNPTGKFVIGG PDGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPTKVDRSAAYMCRYLAKNVVAAGLATRCTIQVSYAIGVSHPLSVYVDM HGTERDVDHARLETVLRELVNLTPRGIREHLHLNRPIYVPTSAYGHFGREPDDRLGTFTWEKTDLAPALKAAFGR >Mature_395_residues MRDKGDYLFTSESVSEGHPDKVADRISDTVLDAFLAADPYARVACETLVTTNRIVLAGETRGPSTITREYLAHLARLAVH DIGYEQEGFSWRDAKIDVLLHEQSVDIAVGVDAAGNKDEGAGDQGIMFGYACSETDALMPAPIYYAHLILRRMTELRKIG DARAAGLLPDAKSQVTLRYADGKPVGTTSIVVSTQHEDGMSQDEIKAMLRPLVTELLPDGWMCPDDQFYVNPTGKFVIGG PDGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPTKVDRSAAYMCRYLAKNVVAAGLATRCTIQVSYAIGVSHPLSVYVDM HGTERDVDHARLETVLRELVNLTPRGIREHLHLNRPIYVPTSAYGHFGREPDDRLGTFTWEKTDLAPALKAAFGR
Specific function: Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the e
COG id: COG0192
COG function: function code H; S-adenosylmethionine synthetase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AdoMet synthase family
Homologues:
Organism=Homo sapiens, GI5174529, Length=387, Percent_Identity=47.2868217054264, Blast_Score=313, Evalue=2e-85, Organism=Homo sapiens, GI4557737, Length=386, Percent_Identity=45.3367875647668, Blast_Score=296, Evalue=2e-80, Organism=Escherichia coli, GI1789311, Length=391, Percent_Identity=54.4757033248082, Blast_Score=399, Evalue=1e-112, Organism=Caenorhabditis elegans, GI17538498, Length=384, Percent_Identity=47.1354166666667, Blast_Score=312, Evalue=2e-85, Organism=Caenorhabditis elegans, GI17538494, Length=384, Percent_Identity=46.3541666666667, Blast_Score=308, Evalue=4e-84, Organism=Caenorhabditis elegans, GI25145633, Length=387, Percent_Identity=46.2532299741602, Blast_Score=306, Evalue=1e-83, Organism=Caenorhabditis elegans, GI17551082, Length=394, Percent_Identity=44.1624365482233, Blast_Score=289, Evalue=2e-78, Organism=Caenorhabditis elegans, GI32565905, Length=382, Percent_Identity=43.455497382199, Blast_Score=273, Evalue=1e-73, Organism=Caenorhabditis elegans, GI32565911, Length=337, Percent_Identity=43.9169139465875, Blast_Score=244, Evalue=6e-65, Organism=Caenorhabditis elegans, GI25145635, Length=337, Percent_Identity=43.026706231454, Blast_Score=236, Evalue=2e-62, Organism=Caenorhabditis elegans, GI32565903, Length=303, Percent_Identity=44.8844884488449, Blast_Score=230, Evalue=8e-61, Organism=Caenorhabditis elegans, GI32565909, Length=79, Percent_Identity=53.1645569620253, Blast_Score=87, Evalue=2e-17, Organism=Caenorhabditis elegans, GI32565907, Length=39, Percent_Identity=76.9230769230769, Blast_Score=68, Evalue=9e-12, Organism=Saccharomyces cerevisiae, GI6323209, Length=386, Percent_Identity=44.0414507772021, Blast_Score=298, Evalue=1e-81, Organism=Saccharomyces cerevisiae, GI6320710, Length=390, Percent_Identity=43.5897435897436, Blast_Score=296, Evalue=4e-81, Organism=Drosophila melanogaster, GI24580527, Length=390, Percent_Identity=45.6410256410256, Blast_Score=290, Evalue=1e-78, Organism=Drosophila melanogaster, GI24580525, Length=390, Percent_Identity=45.6410256410256, Blast_Score=290, Evalue=1e-78, Organism=Drosophila melanogaster, GI45552159, Length=390, Percent_Identity=45.3846153846154, Blast_Score=288, Evalue=4e-78, Organism=Drosophila melanogaster, GI24580529, Length=390, Percent_Identity=45.3846153846154, Blast_Score=288, Evalue=4e-78, Organism=Drosophila melanogaster, GI24580537, Length=390, Percent_Identity=45.3846153846154, Blast_Score=288, Evalue=4e-78, Organism=Drosophila melanogaster, GI24580533, Length=390, Percent_Identity=45.3846153846154, Blast_Score=288, Evalue=4e-78, Organism=Drosophila melanogaster, GI24580535, Length=390, Percent_Identity=45.3846153846154, Blast_Score=288, Evalue=4e-78, Organism=Drosophila melanogaster, GI24580531, Length=390, Percent_Identity=45.3846153846154, Blast_Score=288, Evalue=4e-78, Organism=Drosophila melanogaster, GI24580541, Length=385, Percent_Identity=43.6363636363636, Blast_Score=264, Evalue=7e-71, Organism=Drosophila melanogaster, GI24580539, Length=127, Percent_Identity=44.8818897637795, Blast_Score=102, Evalue=5e-22,
Paralogues:
None
Copy number: 7,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): METK_ACICJ (A5FXD8)
Other databases:
- EMBL: CP000697 - RefSeq: YP_001234189.1 - ProteinModelPortal: A5FXD8 - SMR: A5FXD8 - STRING: A5FXD8 - GeneID: 5159987 - GenomeReviews: CP000697_GR - KEGG: acr:Acry_1054 - eggNOG: COG0192 - HOGENOM: HBG443662 - OMA: QDGFHWK - ProtClustDB: PRK05250 - BioCyc: ACRY349163:ACRY_1054-MONOMER - GO: GO:0005737 - HAMAP: MF_00086 - InterPro: IPR022631 - InterPro: IPR022630 - InterPro: IPR022629 - InterPro: IPR022628 - InterPro: IPR002133 - InterPro: IPR022636 - PANTHER: PTHR11964 - PIRSF: PIRSF000497 - TIGRFAMs: TIGR01034
Pfam domain/function: PF02773 S-AdoMet_synt_C; PF02772 S-AdoMet_synt_M; PF00438 S-AdoMet_synt_N; SSF55973 S-AdoMet_synt
EC number: =2.5.1.6
Molecular weight: Translated: 42981; Mature: 42981
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: PS00376 ADOMET_SYNTHASE_1; PS00377 ADOMET_SYNTHASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDKGDYLFTSESVSEGHPDKVADRISDTVLDAFLAADPYARVACETLVTTNRIVLAGET CCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEECC RGPSTITREYLAHLARLAVHDIGYEQEGFSWRDAKIDVLLHEQSVDIAVGVDAAGNKDEG CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCEEEEECCCCCCCCCC AGDQGIMFGYACSETDALMPAPIYYAHLILRRMTELRKIGDARAAGLLPDAKSQVTLRYA CCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCEEEEEEC DGKPVGTTSIVVSTQHEDGMSQDEIKAMLRPLVTELLPDGWMCPDDQFYVNPTGKFVIGG CCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCEEEEC PDGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPTKVDRSAAYMCRYLAKNVVAAGLATRC CCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEE TIQVSYAIGVSHPLSVYVDMHGTERDVDHARLETVLRELVNLTPRGIREHLHLNRPIYVP EEEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEC TSAYGHFGREPDDRLGTFTWEKTDLAPALKAAFGR CCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHCCC >Mature Secondary Structure MRDKGDYLFTSESVSEGHPDKVADRISDTVLDAFLAADPYARVACETLVTTNRIVLAGET CCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEECC RGPSTITREYLAHLARLAVHDIGYEQEGFSWRDAKIDVLLHEQSVDIAVGVDAAGNKDEG CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCEEEEECCCCCCCCCC AGDQGIMFGYACSETDALMPAPIYYAHLILRRMTELRKIGDARAAGLLPDAKSQVTLRYA CCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCEEEEEEC DGKPVGTTSIVVSTQHEDGMSQDEIKAMLRPLVTELLPDGWMCPDDQFYVNPTGKFVIGG CCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCEEEEC PDGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPTKVDRSAAYMCRYLAKNVVAAGLATRC CCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEE TIQVSYAIGVSHPLSVYVDMHGTERDVDHARLETVLRELVNLTPRGIREHLHLNRPIYVP EEEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEC TSAYGHFGREPDDRLGTFTWEKTDLAPALKAAFGR CCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA