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The map label for this gene is arnC [H]

Identifier: 148259986

GI number: 148259986

Start: 1080207

End: 1080983

Strand: Reverse

Name: arnC [H]

Synonym: Acry_0976

Alternate gene names: 148259986

Gene position: 1080983-1080207 (Counterclockwise)

Preceding gene: 148259987

Following gene: 148259985

Centisome position: 31.89

GC content: 70.4

Gene sequence:

>777_bases
ATGGAACCACCGCCGTCGCATCTGCTTGCCGTCGTCGTCCCCGTCCGCGACGAGGCGCCGAACATTCCGCCGCTCGTGGC
CGAATTCGGCACGGCGCTGGCCGGGATCGATCACGAGATCATCTTCGTCGACGACGGCAGCACCGATGACAGCCAAGCGG
TGCTCGCGGCACTGGCGAAGGAAAGGCCGGAGATTCGCGTCCTGCGCCACACGGGGAGTTTCGGTCAGAGCGCGGCAATA
CTCACCGGCGTGACCGCCGCGAACGCGGTGTGGATCGCCACGATTGATGGCGACGGGCAGAATGATCCGGCCGACATTCC
GGACATGCTCCAGCGCGCCTGGCAGGAAGAGCGGCCCGATGAGCCGGTGCTGGTGGCGGGGCGCCGCGTCCGGCGCAAGG
ACAGCGCGATGAAGCGGATCGCCTCGCGGATCGCCAACGGCGTCAGGGCGCGGGTGCTGCACGACGGTGTGCCCGATAGC
GGCTGCGGGCTGAAGCTGTTCCGGCGCTCGGTCTTTCTCGGACTGCCGCGCTTCGACCACATGCACCGGTTTCTGCCGGC
GCTGTTCGCGAGCATCGGCGGGCGGACGGTGCTGCACCCCGTTGCCCACCGCCCGCGTGTGGCCGGGCGGTCGCATTACG
GGACATGGGACCGGTTGCGTGTCGGGATCGTCGACCTCGCGGGCGTGGCCTGGTTGCAGCGGCGGGCCTGCCGGCCGGTT
CTGGGCGCCGGCGGAGCCGATGCCGGGTCGCCGGCCTCGCTGGAGGTGGCTCGGTGA

Upstream 100 bases:

>100_bases
CCAGGATACAATTTGAAAATCGCGACCCCGCGTTTGTCAGATCGGGCTCACATTTCCGGATCAGGATCCACCCGCGTCAA
CCCTGTCCGGGACTCCGACC

Downstream 100 bases:

>100_bases
TCCGCCTCGCCCGGCCGGCGCTGCTGGCGGGAGGGCTGCTGGGCGCGGCGCTGGTGCTGCACCTGCATCCGTTCGGCGCG
CTGTTCGCGCCGCATCCCGG

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MEPPPSHLLAVVVPVRDEAPNIPPLVAEFGTALAGIDHEIIFVDDGSTDDSQAVLAALAKERPEIRVLRHTGSFGQSAAI
LTGVTAANAVWIATIDGDGQNDPADIPDMLQRAWQEERPDEPVLVAGRRVRRKDSAMKRIASRIANGVRARVLHDGVPDS
GCGLKLFRRSVFLGLPRFDHMHRFLPALFASIGGRTVLHPVAHRPRVAGRSHYGTWDRLRVGIVDLAGVAWLQRRACRPV
LGAGGADAGSPASLEVAR

Sequences:

>Translated_258_residues
MEPPPSHLLAVVVPVRDEAPNIPPLVAEFGTALAGIDHEIIFVDDGSTDDSQAVLAALAKERPEIRVLRHTGSFGQSAAI
LTGVTAANAVWIATIDGDGQNDPADIPDMLQRAWQEERPDEPVLVAGRRVRRKDSAMKRIASRIANGVRARVLHDGVPDS
GCGLKLFRRSVFLGLPRFDHMHRFLPALFASIGGRTVLHPVAHRPRVAGRSHYGTWDRLRVGIVDLAGVAWLQRRACRPV
LGAGGADAGSPASLEVAR
>Mature_258_residues
MEPPPSHLLAVVVPVRDEAPNIPPLVAEFGTALAGIDHEIIFVDDGSTDDSQAVLAALAKERPEIRVLRHTGSFGQSAAI
LTGVTAANAVWIATIDGDGQNDPADIPDMLQRAWQEERPDEPVLVAGRRVRRKDSAMKRIASRIANGVRARVLHDGVPDS
GCGLKLFRRSVFLGLPRFDHMHRFLPALFASIGGRTVLHPVAHRPRVAGRSHYGTWDRLRVGIVDLAGVAWLQRRACRPV
LGAGGADAGSPASLEVAR

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1788588, Length=231, Percent_Identity=30.7359307359307, Blast_Score=100, Evalue=9e-23,
Organism=Escherichia coli, GI1788692, Length=211, Percent_Identity=26.0663507109005, Blast_Score=77, Evalue=8e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022857
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.7.8.30 [H]

Molecular weight: Translated: 27782; Mature: 27782

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPPPSHLLAVVVPVRDEAPNIPPLVAEFGTALAGIDHEIIFVDDGSTDDSQAVLAALAK
CCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHH
ERPEIRVLRHTGSFGQSAAILTGVTAANAVWIATIDGDGQNDPADIPDMLQRAWQEERPD
CCCCEEEEEECCCCCCCHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCC
EPVLVAGRRVRRKDSAMKRIASRIANGVRARVLHDGVPDSGCGLKLFRRSVFLGLPRFDH
CCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHH
MHRFLPALFASIGGRTVLHPVAHRPRVAGRSHYGTWDRLRVGIVDLAGVAWLQRRACRPV
HHHHHHHHHHHHCCCEEEHHHHCCCCCCCCCCCCCHHHHEEHHHHHHHHHHHHHHCCCCH
LGAGGADAGSPASLEVAR
HCCCCCCCCCCCCEEECC
>Mature Secondary Structure
MEPPPSHLLAVVVPVRDEAPNIPPLVAEFGTALAGIDHEIIFVDDGSTDDSQAVLAALAK
CCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHH
ERPEIRVLRHTGSFGQSAAILTGVTAANAVWIATIDGDGQNDPADIPDMLQRAWQEERPD
CCCCEEEEEECCCCCCCHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCC
EPVLVAGRRVRRKDSAMKRIASRIANGVRARVLHDGVPDSGCGLKLFRRSVFLGLPRFDH
CCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHH
MHRFLPALFASIGGRTVLHPVAHRPRVAGRSHYGTWDRLRVGIVDLAGVAWLQRRACRPV
HHHHHHHHHHHHCCCEEEHHHHCCCCCCCCCCCCCHHHHEEHHHHHHHHHHHHHHCCCCH
LGAGGADAGSPASLEVAR
HCCCCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA