| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is 148259987
Identifier: 148259987
GI number: 148259987
Start: 1081211
End: 1082305
Strand: Reverse
Name: 148259987
Synonym: Acry_0977
Alternate gene names: NA
Gene position: 1082305-1081211 (Counterclockwise)
Preceding gene: 148259989
Following gene: 148259986
Centisome position: 31.93
GC content: 68.68
Gene sequence:
>1095_bases ATGTCAAAGGCGTTCCGTAAGAAAGTGTTGGCCACGACACTGTATGTCCTGGGTTTGGGTTCGGTTCTGGCGCTCGCCGG ATGCGGCTCCAGCCCTTCGGTGACCCCTGTGTCCGGCGCGGTTACCGGAGGAGGTTCATCCGGAGCGAAATCCAGCGGGG GAGGCACGGCGGGCGGAAGCACGGCGGGTGGCTCGACGGGTAGCTCGACGGGGGCGGCGGGCTCGGCAGGGGCTACAGGC TCGGCGGGGGCGACGGGCTCGGCGGGCGCCACGGGTGCGACCGGAGCAACTGGTGCTACGGGCGCAACAGGTGCTACGGG CGCTACGGGCGCTACGGGCGCTACGGGCGCAACGGGCGCAACCGGTGCGGCAGGTGCGGCGGGCGTCACAAGCTTCCTCA GCCCTGTCACCAATGCGCTCGCCAAGGTTTCGGTCCTGAATACCTCGACGAGCTCGTCCAGCGTCAAGCCGCTGATCAGC GCCAATGTGCTGAGCACGACGCCACAGGCGAATTCCCCGATCCAGGTTGGTGTGCTGTCGAACGGCCAGGTGGTCCAGCT CAAGGCCGGATCGCTCAGCACCTCGACGCTGCCGGTGGTTTCGACGCTTCTGGCGACGTCGAACAAGAGCGTCGGCAGCA ATGTCGGCGGCGTGGTCAACACGGTGGCAAACAGCACTGGCAGCGTGCCCGTGCTGGGTGGCACGCTGAAGGGGGCGCTG GTGACGGCGGGCAACGCGATCGGCGGCACGAGCAATCCGGGCGGGGCGACGCTGACCCAGACGCTCACAAACCTGACCGG CTCGGCCGGCACCATTCTCGACACGGCGACCGGCACGTTGCCGACAGGGTCGACCGGAACGCTGCCGATCGGAACGCTGC CGACCGGAACAGGCAATCCGCTGGCGCCGGTCACCAGCACGGTATCGACCATCACGGGCACGCTGTCAGGCGCGGCGGGC GGTTCGAGCCCGCTGGCGCCGGTGACCACGACGGTATCGACGGTTACGGGCACGTTGTCCGGCGCGACAGGGGGCAGCAC GAGTCCGCTTGCGCCGGTCACCGGCGCATTGTCCACCGTGACAGGGGCGCTGTAA
Upstream 100 bases:
>100_bases ACAATGTTAATGAAAGGTTACTGCCATCGCCATTCATCCTCGGATTTCCCCCGGGTTGAGCGGACGAAAACAATCATTGC AACTTGCAGGTGGAGCTTTC
Downstream 100 bases:
>100_bases CAGGAGTTCAGCCAGGGACGGCGGCACCGGTCGCTGTCCCTGGCTTGTCTCGGCGCTGGTCTGAATGTCGCAGAAGAAAT ATTATGGAACCTTATTGCGT
Product: triple helix repeat-containing collagen
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 364; Mature: 363
Protein sequence:
>364_residues MSKAFRKKVLATTLYVLGLGSVLALAGCGSSPSVTPVSGAVTGGGSSGAKSSGGGTAGGSTAGGSTGSSTGAAGSAGATG SAGATGSAGATGATGATGATGATGATGATGATGATGATGATGAAGAAGVTSFLSPVTNALAKVSVLNTSTSSSSVKPLIS ANVLSTTPQANSPIQVGVLSNGQVVQLKAGSLSTSTLPVVSTLLATSNKSVGSNVGGVVNTVANSTGSVPVLGGTLKGAL VTAGNAIGGTSNPGGATLTQTLTNLTGSAGTILDTATGTLPTGSTGTLPIGTLPTGTGNPLAPVTSTVSTITGTLSGAAG GSSPLAPVTTTVSTVTGTLSGATGGSTSPLAPVTGALSTVTGAL
Sequences:
>Translated_364_residues MSKAFRKKVLATTLYVLGLGSVLALAGCGSSPSVTPVSGAVTGGGSSGAKSSGGGTAGGSTAGGSTGSSTGAAGSAGATG SAGATGSAGATGATGATGATGATGATGATGATGATGATGATGAAGAAGVTSFLSPVTNALAKVSVLNTSTSSSSVKPLIS ANVLSTTPQANSPIQVGVLSNGQVVQLKAGSLSTSTLPVVSTLLATSNKSVGSNVGGVVNTVANSTGSVPVLGGTLKGAL VTAGNAIGGTSNPGGATLTQTLTNLTGSAGTILDTATGTLPTGSTGTLPIGTLPTGTGNPLAPVTSTVSTITGTLSGAAG GSSPLAPVTTTVSTVTGTLSGATGGSTSPLAPVTGALSTVTGAL >Mature_363_residues SKAFRKKVLATTLYVLGLGSVLALAGCGSSPSVTPVSGAVTGGGSSGAKSSGGGTAGGSTAGGSTGSSTGAAGSAGATGS AGATGSAGATGATGATGATGATGATGATGATGATGATGATGAAGAAGVTSFLSPVTNALAKVSVLNTSTSSSSVKPLISA NVLSTTPQANSPIQVGVLSNGQVVQLKAGSLSTSTLPVVSTLLATSNKSVGSNVGGVVNTVANSTGSVPVLGGTLKGALV TAGNAIGGTSNPGGATLTQTLTNLTGSAGTILDTATGTLPTGSTGTLPIGTLPTGTGNPLAPVTSTVSTITGTLSGAAGG SSPLAPVTTTVSTVTGTLSGATGGSTSPLAPVTGALSTVTGAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32638; Mature: 32507
Theoretical pI: Translated: 11.11; Mature: 11.11
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKAFRKKVLATTLYVLGLGSVLALAGCGSSPSVTPVSGAVTGGGSSGAKSSGGGTAGGS CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCC TAGGSTGSSTGAAGSAGATGSAGATGSAGATGATGATGATGATGATGATGATGATGATGA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TGAAGAAGVTSFLSPVTNALAKVSVLNTSTSSSSVKPLISANVLSTTPQANSPIQVGVLS CCCCCHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCHHHCCHHEECCCCCCCCEEEEEEC NGQVVQLKAGSLSTSTLPVVSTLLATSNKSVGSNVGGVVNTVANSTGSVPVLGGTLKGAL CCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCEEECCCCCCEE VTAGNAIGGTSNPGGATLTQTLTNLTGSAGTILDTATGTLPTGSTGTLPIGTLPTGTGNP EECCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCEEECCCCCCCCCC LAPVTSTVSTITGTLSGAAGGSSPLAPVTTTVSTVTGTLSGATGGSTSPLAPVTGALSTV CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHEEECCCCCCCCCCCCCHHHHHHHHH TGAL HCCC >Mature Secondary Structure SKAFRKKVLATTLYVLGLGSVLALAGCGSSPSVTPVSGAVTGGGSSGAKSSGGGTAGGS CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCC TAGGSTGSSTGAAGSAGATGSAGATGSAGATGATGATGATGATGATGATGATGATGATGA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TGAAGAAGVTSFLSPVTNALAKVSVLNTSTSSSSVKPLISANVLSTTPQANSPIQVGVLS CCCCCHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCHHHCCHHEECCCCCCCCEEEEEEC NGQVVQLKAGSLSTSTLPVVSTLLATSNKSVGSNVGGVVNTVANSTGSVPVLGGTLKGAL CCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCEEECCCCCCEE VTAGNAIGGTSNPGGATLTQTLTNLTGSAGTILDTATGTLPTGSTGTLPIGTLPTGTGNP EECCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCEEECCCCCCCCCC LAPVTSTVSTITGTLSGAAGGSSPLAPVTTTVSTVTGTLSGATGGSTSPLAPVTGALSTV CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHEEECCCCCCCCCCCCCHHHHHHHHH TGAL HCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA