| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is yibP [C]
Identifier: 148259915
GI number: 148259915
Start: 997555
End: 998733
Strand: Reverse
Name: yibP [C]
Synonym: Acry_0904
Alternate gene names: 148259915
Gene position: 998733-997555 (Counterclockwise)
Preceding gene: 148259916
Following gene: 148259914
Centisome position: 29.47
GC content: 74.05
Gene sequence:
>1179_bases ATGCCACTGGCCGCGCGCCGCCTCGCCGCGACTGCCGCGCTGTTGGTCGCAGCACTCGCCGCCGGCGCGGCGCGGGCCGA CCAGCTCGGCACGGCGCGCAGCCGGCTCGATCAGGCGAACGCGGCAGCGCAACGCCATCGCGCGGCGGCGGCGGCGGCGG CAAGGGCGGAGGCCATGGCGGCAGCGCGTCGGAAAGCCCTGCTGGCCCAGGAAATCACCGCCAACGCCGCGTTGCGCGCC ACCGAGGACAAGACAGCGCAGGTCGTCGCCCGCCTCGCCGACCTCACCACGAAAACGCAGGCGGCCAAGGCGGAACTCGA TGCCGATTCGGCCGCCATCGCGCCGCTCCTGCCGCTCATCACCCGCCTCGCCCTGCATCCGGCGGCGACCCTGATCGCGT CCGGTGCGGCGCCCGGCAAGGCGGCCGAGGGCGCGCTGGCGATGCAGGGAATCACGCGGCAGATCGCCGCCCGCGCCCGG GCGCTGCGGGCGGCGCGGCGGCGCTATCGGAAGCTTGCGGTGGAACTGGCCGGACAGAAGGCACGGATGGTGGCGGCGGT GGCCCGCCAGAAGGCGGGCGACGCGGCGCTGCTGGCGGCCATTGCCGCGGTCGGGGCCGCGGAAAGCCGCGCATCCCTGC AACGCCAGGCCGAGGCACGGAAAGCTGCCGCGGCGGCCGGACAGGCGCATGACCTCGTCGGCGTCATCTCCCGCCTCGAG CGCGCCCGCGCCGCCGCGGCGCGGCAGGAAGCCGCCGCGCGCATCGCACCGGCAACACCGAAAGCGCTTGCCGGCGCGCC GGTCGCCGGCAAGCTGGTCCGTGCCTTCGCCAGCGCCACGGCCACCGGCCCGGCCACCGGCGATACCTTCGCCGCGGCTC CCGGCGCCGTGGTCAGCGCCACGTGCGGCGGCAACGTGGTGTTCGCGAAGCCCTTCGCCAGCTATGGCAAGCTGATGATC ATCGACTGCGGCGGCGGATACGATTTCGTGATGGCGGGGTTCCAGCAGTTCGATGTATCGGTAGGCCAGCATGTCGAGCC CGGCCAGCCCGTCGGACGGATGCCGGCATTCGATGTGCACAATCCGGGAAACCAGCCGCGCCTCTATGTCGAGCTGCGGC ACGACGGGAAGGCGGTCGACCCGGCGTCACGATTCGGTTCCGGGCCGGGGGAACGCTGA
Upstream 100 bases:
>100_bases TGCATGACGGCCGGCTCGCCGATCTCGCGCCGACGCTTCTCGCCCTGCTCGGGCTTCCCCAGCCGGAAGCGATGACCGGC CGGAGCCTGATCGGCGCCTG
Downstream 100 bases:
>100_bases AACCATGGCGGCCGGCTCTGGACTTCCGGCCCAGCCGCACTATTGGTGGCAGAGATGATGAGGATGGCGCGTATGAAGTT GAGGACCTCTCTGTTGATCA
Product: peptidase M23B
Products: NA
Alternate protein names: Peptidase M; Membrane-Bound Metallopeptidase; Filament-A; Metalloendopeptidase Protein; Peptidase Protein; Metalloendopeptidase; M23 Peptidase Domain Protein; Metallopeptidase Membrane-Bound; M23 Peptidase Domain-Containing Protein; Filament-A Percursor; M23 Family Peptidoglycan-Specific Endopeptidase; M23 Family Non-Proteolytic Peptidase
Number of amino acids: Translated: 392; Mature: 391
Protein sequence:
>392_residues MPLAARRLAATAALLVAALAAGAARADQLGTARSRLDQANAAAQRHRAAAAAAARAEAMAAARRKALLAQEITANAALRA TEDKTAQVVARLADLTTKTQAAKAELDADSAAIAPLLPLITRLALHPAATLIASGAAPGKAAEGALAMQGITRQIAARAR ALRAARRRYRKLAVELAGQKARMVAAVARQKAGDAALLAAIAAVGAAESRASLQRQAEARKAAAAAGQAHDLVGVISRLE RARAAAARQEAAARIAPATPKALAGAPVAGKLVRAFASATATGPATGDTFAAAPGAVVSATCGGNVVFAKPFASYGKLMI IDCGGGYDFVMAGFQQFDVSVGQHVEPGQPVGRMPAFDVHNPGNQPRLYVELRHDGKAVDPASRFGSGPGER
Sequences:
>Translated_392_residues MPLAARRLAATAALLVAALAAGAARADQLGTARSRLDQANAAAQRHRAAAAAAARAEAMAAARRKALLAQEITANAALRA TEDKTAQVVARLADLTTKTQAAKAELDADSAAIAPLLPLITRLALHPAATLIASGAAPGKAAEGALAMQGITRQIAARAR ALRAARRRYRKLAVELAGQKARMVAAVARQKAGDAALLAAIAAVGAAESRASLQRQAEARKAAAAAGQAHDLVGVISRLE RARAAAARQEAAARIAPATPKALAGAPVAGKLVRAFASATATGPATGDTFAAAPGAVVSATCGGNVVFAKPFASYGKLMI IDCGGGYDFVMAGFQQFDVSVGQHVEPGQPVGRMPAFDVHNPGNQPRLYVELRHDGKAVDPASRFGSGPGER >Mature_391_residues PLAARRLAATAALLVAALAAGAARADQLGTARSRLDQANAAAQRHRAAAAAAARAEAMAAARRKALLAQEITANAALRAT EDKTAQVVARLADLTTKTQAAKAELDADSAAIAPLLPLITRLALHPAATLIASGAAPGKAAEGALAMQGITRQIAARARA LRAARRRYRKLAVELAGQKARMVAAVARQKAGDAALLAAIAAVGAAESRASLQRQAEARKAAAAAGQAHDLVGVISRLER ARAAAARQEAAARIAPATPKALAGAPVAGKLVRAFASATATGPATGDTFAAAPGAVVSATCGGNVVFAKPFASYGKLMII DCGGGYDFVMAGFQQFDVSVGQHVEPGQPVGRMPAFDVHNPGNQPRLYVELRHDGKAVDPASRFGSGPGER
Specific function: Unknown
COG id: COG4942
COG function: function code D; Membrane-bound metallopeptidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39711; Mature: 39580
Theoretical pI: Translated: 11.59; Mature: 11.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLAARRLAATAALLVAALAAGAARADQLGTARSRLDQANAAAQRHRAAAAAAARAEAMA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AARRKALLAQEITANAALRATEDKTAQVVARLADLTTKTQAAKAELDADSAAIAPLLPLI HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH TRLALHPAATLIASGAAPGKAAEGALAMQGITRQIAARARALRAARRRYRKLAVELAGQK HHHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH ARMVAAVARQKAGDAALLAAIAAVGAAESRASLQRQAEARKAAAAAGQAHDLVGVISRLE HHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH RARAAAARQEAAARIAPATPKALAGAPVAGKLVRAFASATATGPATGDTFAAAPGAVVSA HHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE TCGGNVVFAKPFASYGKLMIIDCGGGYDFVMAGFQQFDVSVGQHVEPGQPVGRMPAFDVH CCCCCEEEECCHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC NPGNQPRLYVELRHDGKAVDPASRFGSGPGER CCCCCCEEEEEEECCCCCCCCHHHCCCCCCCC >Mature Secondary Structure PLAARRLAATAALLVAALAAGAARADQLGTARSRLDQANAAAQRHRAAAAAAARAEAMA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AARRKALLAQEITANAALRATEDKTAQVVARLADLTTKTQAAKAELDADSAAIAPLLPLI HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH TRLALHPAATLIASGAAPGKAAEGALAMQGITRQIAARARALRAARRRYRKLAVELAGQK HHHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH ARMVAAVARQKAGDAALLAAIAAVGAAESRASLQRQAEARKAAAAAGQAHDLVGVISRLE HHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH RARAAAARQEAAARIAPATPKALAGAPVAGKLVRAFASATATGPATGDTFAAAPGAVVSA HHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE TCGGNVVFAKPFASYGKLMIIDCGGGYDFVMAGFQQFDVSVGQHVEPGQPVGRMPAFDVH CCCCCEEEECCHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC NPGNQPRLYVELRHDGKAVDPASRFGSGPGER CCCCCCEEEEEEECCCCCCCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA