Click here to switch to the map view.

The map label for this gene is ctpA [H]

Identifier: 148259914

GI number: 148259914

Start: 996109

End: 997482

Strand: Reverse

Name: ctpA [H]

Synonym: Acry_0903

Alternate gene names: 148259914

Gene position: 997482-996109 (Counterclockwise)

Preceding gene: 148259915

Following gene: 148259913

Centisome position: 29.43

GC content: 65.5

Gene sequence:

>1374_bases
ATGAAGTTGAGGACCTCTCTGTTGATCACGGCCACGTTCGCGGTCGGCATCGGCGTCGGCATGGTGGCGCCCGCGGTGCA
TGATGCCCTGGCCGGCGTTCGCCAGAGCGACGAGACCTATCGCCAGCTGGGTCTGTTCGAGAACATCTTCCAGCGGATCC
GGGCCGACTACGTGGTGCCCGAACCCTCGAAAAAGCTGATCTACGATGCGATGAACGGCATGCTGACGGGGCTCGACCCG
CACAGCGCCTACATGAACGCCCAGCAGTACAAGGACATGAAGGCCGAGACCTCCGGCCAATTCGGCGGGCTCGGCATCGA
GGTGACCGAGGCGGGCGGCTTCATCAAGGTGATCACCCCCATCGACGGCACACCGGCCGCCAAGGCCGGAATCAAGCCCG
GCGATCTGATCGTGGCGATCGACGGCAAACCGATGGTCGGCGTGACGCTGGACAAGGCGGTCGACCGGATGCGCGGCCCG
GCCGGCAGCAAGATCGATATCACGATCAAGCGCCCCGGCGTCGACAAGCCGGTGCACGTCACCCTGACCCGCGCGATCAT
CCATGTCCACGCGGTCAAGACGGCGCTTTACGGCGATGTCGGCTATCTGCGCCTCGCCAGCTTCTCCGAGAACGCGAATC
GCGACATTCGCCGCGGCGTGGCGAAGCTCAAGGCCGAAAGCCACGGCAAGGTGGACGCCTATATCCTCGACCTTCGCAAC
AATCCCGGCGGTCTGCTCGACCAGGGCATCGCCGTGGCCGATGATTTCCTCAACACCGGCGAGATCGTCTCAACCCATGG
CCGGCACCAGTCCGACGATCAGGTCTGGTACGCCCATGACGGCGACATCACCGGCGGCAAGCCGATCGTCGTGCTGGTGA
ATTCCGGCACCGCCTCGGCGGCGGAAATCGTCAGCGCGGCACTCCAGCAGAACCGCCGCGCGGTGGTGATGGGCACCCGC
ACCTTCGGCAAGGGCTCGGTGCAGACCATCTTCACCATCCCCGGCCACGGCGCGCTGCGAATGACCACGGCGCTCTACTA
CACGCCCTCCGGCAAGTCGCTGCAGGATTACGGCGTCGAGCCCGACCTCGTCGTGCACGAGACGAACAATCCGAAGGATC
ATTTCCCGAAGATTCGCGAGTCGAACATGCCGCACGCCTTCCGCAACCCCTCGGGCCTGAAGGCGCCGATCCTGCCGCCG
AAGCTGGTGCTGCCGGCCGTCGCGAAGACGATCGCGCCACGGCCGCCGGCCAGCTGGCCGAAATTCGAGCCGAAGCACCC
GAACACCGACTACCAGCTCCAGATGGCGCTGAAGCTGGTCCGCGCCATGGCAACAAACCGGGTTGGCGCCAGCCAGGCGG
ATGTGGCGCACTGA

Upstream 100 bases:

>100_bases
ATTCGGTTCCGGGCCGGGGGAACGCTGAAACCATGGCGGCCGGCTCTGGACTTCCGGCCCAGCCGCACTATTGGTGGCAG
AGATGATGAGGATGGCGCGT

Downstream 100 bases:

>100_bases
GACAATGCCGCCGTTCCGGATTGCGCGTTCGGTCAAGCTGTTCTGGGCCGGAGTCGCCGCCGCTGCGCTGATCGGCGCGG
TCGTGCTGCAGGTAATCGGC

Product: carboxyl-terminal protease

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 457; Mature: 457

Protein sequence:

>457_residues
MKLRTSLLITATFAVGIGVGMVAPAVHDALAGVRQSDETYRQLGLFENIFQRIRADYVVPEPSKKLIYDAMNGMLTGLDP
HSAYMNAQQYKDMKAETSGQFGGLGIEVTEAGGFIKVITPIDGTPAAKAGIKPGDLIVAIDGKPMVGVTLDKAVDRMRGP
AGSKIDITIKRPGVDKPVHVTLTRAIIHVHAVKTALYGDVGYLRLASFSENANRDIRRGVAKLKAESHGKVDAYILDLRN
NPGGLLDQGIAVADDFLNTGEIVSTHGRHQSDDQVWYAHDGDITGGKPIVVLVNSGTASAAEIVSAALQQNRRAVVMGTR
TFGKGSVQTIFTIPGHGALRMTTALYYTPSGKSLQDYGVEPDLVVHETNNPKDHFPKIRESNMPHAFRNPSGLKAPILPP
KLVLPAVAKTIAPRPPASWPKFEPKHPNTDYQLQMALKLVRAMATNRVGASQADVAH

Sequences:

>Translated_457_residues
MKLRTSLLITATFAVGIGVGMVAPAVHDALAGVRQSDETYRQLGLFENIFQRIRADYVVPEPSKKLIYDAMNGMLTGLDP
HSAYMNAQQYKDMKAETSGQFGGLGIEVTEAGGFIKVITPIDGTPAAKAGIKPGDLIVAIDGKPMVGVTLDKAVDRMRGP
AGSKIDITIKRPGVDKPVHVTLTRAIIHVHAVKTALYGDVGYLRLASFSENANRDIRRGVAKLKAESHGKVDAYILDLRN
NPGGLLDQGIAVADDFLNTGEIVSTHGRHQSDDQVWYAHDGDITGGKPIVVLVNSGTASAAEIVSAALQQNRRAVVMGTR
TFGKGSVQTIFTIPGHGALRMTTALYYTPSGKSLQDYGVEPDLVVHETNNPKDHFPKIRESNMPHAFRNPSGLKAPILPP
KLVLPAVAKTIAPRPPASWPKFEPKHPNTDYQLQMALKLVRAMATNRVGASQADVAH
>Mature_457_residues
MKLRTSLLITATFAVGIGVGMVAPAVHDALAGVRQSDETYRQLGLFENIFQRIRADYVVPEPSKKLIYDAMNGMLTGLDP
HSAYMNAQQYKDMKAETSGQFGGLGIEVTEAGGFIKVITPIDGTPAAKAGIKPGDLIVAIDGKPMVGVTLDKAVDRMRGP
AGSKIDITIKRPGVDKPVHVTLTRAIIHVHAVKTALYGDVGYLRLASFSENANRDIRRGVAKLKAESHGKVDAYILDLRN
NPGGLLDQGIAVADDFLNTGEIVSTHGRHQSDDQVWYAHDGDITGGKPIVVLVNSGTASAAEIVSAALQQNRRAVVMGTR
TFGKGSVQTIFTIPGHGALRMTTALYYTPSGKSLQDYGVEPDLVVHETNNPKDHFPKIRESNMPHAFRNPSGLKAPILPP
KLVLPAVAKTIAPRPPASWPKFEPKHPNTDYQLQMALKLVRAMATNRVGASQADVAH

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=343, Percent_Identity=31.4868804664723, Blast_Score=134, Evalue=1e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 49118; Mature: 49118

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLRTSLLITATFAVGIGVGMVAPAVHDALAGVRQSDETYRQLGLFENIFQRIRADYVVP
CCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCC
EPSKKLIYDAMNGMLTGLDPHSAYMNAQQYKDMKAETSGQFGGLGIEVTEAGGFIKVITP
CCCHHHHHHHHCCEEECCCHHHHHHCHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEC
IDGTPAAKAGIKPGDLIVAIDGKPMVGVTLDKAVDRMRGPAGSKIDITIKRPGVDKPVHV
CCCCCCHHCCCCCCCEEEEECCCCEEEEEHHHHHHHHCCCCCCEEEEEEECCCCCCCEEE
TLTRAIIHVHAVKTALYGDVGYLRLASFSENANRDIRRGVAKLKAESHGKVDAYILDLRN
EHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEC
NPGGLLDQGIAVADDFLNTGEIVSTHGRHQSDDQVWYAHDGDITGGKPIVVLVNSGTASA
CCCCHHHCCCHHHHHHCCCCCEEECCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCHH
AEIVSAALQQNRRAVVMGTRTFGKGSVQTIFTIPGHGALRMTTALYYTPSGKSLQDYGVE
HHHHHHHHHCCCEEEEEEECCCCCCCEEEEEEECCCCCEEEEEEEEECCCCCCHHHCCCC
PDLVVHETNNPKDHFPKIRESNMPHAFRNPSGLKAPILPPKLVLPAVAKTIAPRPPASWP
CCEEEECCCCCHHHCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC
KFEPKHPNTDYQLQMALKLVRAMATNRVGASQADVAH
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MKLRTSLLITATFAVGIGVGMVAPAVHDALAGVRQSDETYRQLGLFENIFQRIRADYVVP
CCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCC
EPSKKLIYDAMNGMLTGLDPHSAYMNAQQYKDMKAETSGQFGGLGIEVTEAGGFIKVITP
CCCHHHHHHHHCCEEECCCHHHHHHCHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEC
IDGTPAAKAGIKPGDLIVAIDGKPMVGVTLDKAVDRMRGPAGSKIDITIKRPGVDKPVHV
CCCCCCHHCCCCCCCEEEEECCCCEEEEEHHHHHHHHCCCCCCEEEEEEECCCCCCCEEE
TLTRAIIHVHAVKTALYGDVGYLRLASFSENANRDIRRGVAKLKAESHGKVDAYILDLRN
EHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEC
NPGGLLDQGIAVADDFLNTGEIVSTHGRHQSDDQVWYAHDGDITGGKPIVVLVNSGTASA
CCCCHHHCCCHHHHHHCCCCCEEECCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCHH
AEIVSAALQQNRRAVVMGTRTFGKGSVQTIFTIPGHGALRMTTALYYTPSGKSLQDYGVE
HHHHHHHHHCCCEEEEEEECCCCCCCEEEEEEECCCCCEEEEEEEEECCCCCCHHHCCCC
PDLVVHETNNPKDHFPKIRESNMPHAFRNPSGLKAPILPPKLVLPAVAKTIAPRPPASWP
CCEEEECCCCCHHHCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC
KFEPKHPNTDYQLQMALKLVRAMATNRVGASQADVAH
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]