| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is 148259895
Identifier: 148259895
GI number: 148259895
Start: 974969
End: 975766
Strand: Reverse
Name: 148259895
Synonym: Acry_0884
Alternate gene names: NA
Gene position: 975766-974969 (Counterclockwise)
Preceding gene: 148259896
Following gene: 148259893
Centisome position: 28.79
GC content: 77.32
Gene sequence:
>798_bases ATGGCGCGGCCCCGCCGGCACGACGACCGCGGCTTCGCGCTGCTGATCGTGCTGGCGGTGCTGGTGCTGTTCGGCTTCCT CGTCACCCGGCTGCTGGTCGCCGCCCGCCAGCAGATGGCGATCGCCGGCAACCTGCGCGACGCGGCGGTGGCGGCGGCGG CGGCCGACGGCGGCGTGTGGCTCGCCGTCGCCCGGCTCGATGCCGGCGGCCCGGCGCCGCGGGATGTGCGGATCGGCGCA TCGCATGTCCGTCTTGCCACCAGCGGCGTCGCCGGCCGGATCAACCCCGACACCGCACCCGCCCCCCTGCTGGAAGCGCT GTTCCGCGTCGGCGGCATGGCGGCCGCACCGGCCCGCAGCCTCGCCGAAACCCTGGTCGAGGCGCGCGATCCCGCCCTCG CGCCCGCCCGCCTCGCCGCCCTCGTCGCCCGCTACCGCGCCGCCGGCAGCGCCGAAGGTCCGCCGCAGGCGCCGTTCCGC AGCCTCGCCGAGCTTGCCAGCCTCCCGGGGATGACGCCGGGCCTGCTCGCCCGGCTGCGCCCGCATCTCTCGCTCTACGC CCCCGCCTTGCCCGACCTCGCGACGGCGGATCCGGCGGTGCGCGCGGCGGTGGGGCTGGCGGGGCGGATCGACCTGCCGG GCGGGCATGTGAGCGGCCCGCCGGTGGTGCGGATCGAGGCGGTGGCCACCGGGCCGGGCCTCGCCCGTGCCGAGCGCTGT GCGACCATCCGCCTGACACCCGCGAATGTCGATGCGCCCTATATCGTGCTGGACTGGTCGGATGCGCGCTGTGGCTGA
Upstream 100 bases:
>100_bases CCAACGCCGCCAACGTGCCCGCCGAACTCAACGGCCTGCCGATGGACGGATCGGCCGATCCGCAAGCGGCGCTGCGCCGG CGTCTCGGGCTGCACTGAGC
Downstream 100 bases:
>100_bases ACCCGCCTCAGCGGTTGCAGATCATCCCCGGCGCACCCGGCGCCGCGGTCACGTCCTTCGGCCCTTTCGAGCACAAATCA TACGCAAGCCCCGGCCGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MARPRRHDDRGFALLIVLAVLVLFGFLVTRLLVAARQQMAIAGNLRDAAVAAAAADGGVWLAVARLDAGGPAPRDVRIGA SHVRLATSGVAGRINPDTAPAPLLEALFRVGGMAAAPARSLAETLVEARDPALAPARLAALVARYRAAGSAEGPPQAPFR SLAELASLPGMTPGLLARLRPHLSLYAPALPDLATADPAVRAAVGLAGRIDLPGGHVSGPPVVRIEAVATGPGLARAERC ATIRLTPANVDAPYIVLDWSDARCG
Sequences:
>Translated_265_residues MARPRRHDDRGFALLIVLAVLVLFGFLVTRLLVAARQQMAIAGNLRDAAVAAAAADGGVWLAVARLDAGGPAPRDVRIGA SHVRLATSGVAGRINPDTAPAPLLEALFRVGGMAAAPARSLAETLVEARDPALAPARLAALVARYRAAGSAEGPPQAPFR SLAELASLPGMTPGLLARLRPHLSLYAPALPDLATADPAVRAAVGLAGRIDLPGGHVSGPPVVRIEAVATGPGLARAERC ATIRLTPANVDAPYIVLDWSDARCG >Mature_264_residues ARPRRHDDRGFALLIVLAVLVLFGFLVTRLLVAARQQMAIAGNLRDAAVAAAAADGGVWLAVARLDAGGPAPRDVRIGAS HVRLATSGVAGRINPDTAPAPLLEALFRVGGMAAAPARSLAETLVEARDPALAPARLAALVARYRAAGSAEGPPQAPFRS LAELASLPGMTPGLLARLRPHLSLYAPALPDLATADPAVRAAVGLAGRIDLPGGHVSGPPVVRIEAVATGPGLARAERCA TIRLTPANVDAPYIVLDWSDARCG
Specific function: Unknown
COG id: COG3156
COG function: function code U; Type II secretory pathway, component PulK
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27145; Mature: 27014
Theoretical pI: Translated: 11.17; Mature: 11.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARPRRHDDRGFALLIVLAVLVLFGFLVTRLLVAARQQMAIAGNLRDAAVAAAAADGGVW CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEE LAVARLDAGGPAPRDVRIGASHVRLATSGVAGRINPDTAPAPLLEALFRVGGMAAAPARS EEEEEECCCCCCCCCEECCCHHEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHH LAETLVEARDPALAPARLAALVARYRAAGSAEGPPQAPFRSLAELASLPGMTPGLLARLR HHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHH PHLSLYAPALPDLATADPAVRAAVGLAGRIDLPGGHVSGPPVVRIEAVATGPGLARAERC HHHHHHCCCCCCCCCCCHHHHHHHCCCCEEECCCCCCCCCCEEEEEEEECCCCHHHHHHC ATIRLTPANVDAPYIVLDWSDARCG EEEEEECCCCCCCEEEEECCCCCCC >Mature Secondary Structure ARPRRHDDRGFALLIVLAVLVLFGFLVTRLLVAARQQMAIAGNLRDAAVAAAAADGGVW CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEE LAVARLDAGGPAPRDVRIGASHVRLATSGVAGRINPDTAPAPLLEALFRVGGMAAAPARS EEEEEECCCCCCCCCEECCCHHEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHH LAETLVEARDPALAPARLAALVARYRAAGSAEGPPQAPFRSLAELASLPGMTPGLLARLR HHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHH PHLSLYAPALPDLATADPAVRAAVGLAGRIDLPGGHVSGPPVVRIEAVATGPGLARAERC HHHHHHCCCCCCCCCCCHHHHHHHCCCCEEECCCCCCCCCCEEEEEEEECCCCHHHHHHC ATIRLTPANVDAPYIVLDWSDARCG EEEEEECCCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA