Click here to switch to the map view.

The map label for this gene is accD [H]

Identifier: 148259856

GI number: 148259856

Start: 934075

End: 934944

Strand: Reverse

Name: accD [H]

Synonym: Acry_0845

Alternate gene names: 148259856

Gene position: 934944-934075 (Counterclockwise)

Preceding gene: 148259857

Following gene: 148259855

Centisome position: 27.59

GC content: 69.31

Gene sequence:

>870_bases
ATGAACTGGCTTTCCGAATTCGTCCGCCCGCGCATCCGCACCCTGCTGGGCCGCAAGGAGGCGCCGGACAATCTCTGGCA
TCAGTGCAGCGCCTGCCAGCAGATGATCTTTCACCGCGAACTCGAGAACAACCTGAAGGTCTGTCCGCATTGCGGGCACC
ACATGCGGGCGACGGCGGCCGAGCGGCTGGCCTGGACCTTCGATGGCGGCGCGTTCCAGAGGATCGACCTGCCCAAGGTG
CCGGCCGATCCGCTGAAGTTCCATGACCGCAAGAAATATCCCGACCGCCTGGCCGACGCGCGCCGGAAGACCGGCATGGA
GGACGCCGTGCTGGTGGCGCATGGCACGGTGGGCGGGCACCGGGCCGTGGTCGCGGCGATGGATTTCCGCTTCATGGGCG
GCTCGATGGGCGCGGCGATGGGCGAGGCGCTGGTCACCGCCGCCCGGCTCGCGGTGCTGCAGAAGGCGGCGCTGATCGTC
TTCACCGCCTCGGGCGGGGCGCGGATGCAGGAAGGGCCGGTGAGCCTGATGCAGATGCCGCGCACCACCATCGCCGTGCA
GATGGTCCGCGAGGCGGGGCTGCCCTATATCGTCGTGCTGACCGACCCGACCACCGGCGGGGTGACCGCCTCGTTCGCGA
TGCTGGGCGATATCCAGATCGCCGAGCCGAACGCGCTGATCGGCTTCGCCGGGGCGCGGGTGATCGAGGAGACGATCCGC
GAGAAGCTGCCCGAAGGCTTCCAGCGCGCCGAATACCTGCTCGAACACGGCATGGTGGACATGGTGCTCGCGCGCGGCGA
ACTGGCGGCGACACTTGGGCGGCTGCTCGGCCTGCTGAAGGTGGGGCGGCCGGACGCAGAGGCGGCGTGA

Upstream 100 bases:

>100_bases
GGCGGGTTCCTGAATTCGGGCTTCGGCCGGGCGATCGCGATGGGGGCCGGGTTCGGCCTCGGCGACGACCTGATCAACAG
CATTTTCTGACCGGCCCGAC

Downstream 100 bases:

>100_bases
GCGGGGCGGCGCCGGCCCCGGCACCGGCACCGAGCCGGATCGACGCGCGGATCGAGCGGCTGCACGCGCTCTATCCGCGG
CTGATCGACCTGCGGCTGGA

Product: acetyl-CoA carboxylase, carboxyl transferase subunit beta

Products: NA

Alternate protein names: ACCase subunit beta; Acetyl-CoA carboxylase carboxyltransferase subunit beta [H]

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MNWLSEFVRPRIRTLLGRKEAPDNLWHQCSACQQMIFHRELENNLKVCPHCGHHMRATAAERLAWTFDGGAFQRIDLPKV
PADPLKFHDRKKYPDRLADARRKTGMEDAVLVAHGTVGGHRAVVAAMDFRFMGGSMGAAMGEALVTAARLAVLQKAALIV
FTASGGARMQEGPVSLMQMPRTTIAVQMVREAGLPYIVVLTDPTTGGVTASFAMLGDIQIAEPNALIGFAGARVIEETIR
EKLPEGFQRAEYLLEHGMVDMVLARGELAATLGRLLGLLKVGRPDAEAA

Sequences:

>Translated_289_residues
MNWLSEFVRPRIRTLLGRKEAPDNLWHQCSACQQMIFHRELENNLKVCPHCGHHMRATAAERLAWTFDGGAFQRIDLPKV
PADPLKFHDRKKYPDRLADARRKTGMEDAVLVAHGTVGGHRAVVAAMDFRFMGGSMGAAMGEALVTAARLAVLQKAALIV
FTASGGARMQEGPVSLMQMPRTTIAVQMVREAGLPYIVVLTDPTTGGVTASFAMLGDIQIAEPNALIGFAGARVIEETIR
EKLPEGFQRAEYLLEHGMVDMVLARGELAATLGRLLGLLKVGRPDAEAA
>Mature_289_residues
MNWLSEFVRPRIRTLLGRKEAPDNLWHQCSACQQMIFHRELENNLKVCPHCGHHMRATAAERLAWTFDGGAFQRIDLPKV
PADPLKFHDRKKYPDRLADARRKTGMEDAVLVAHGTVGGHRAVVAAMDFRFMGGSMGAAMGEALVTAARLAVLQKAALIV
FTASGGARMQEGPVSLMQMPRTTIAVQMVREAGLPYIVVLTDPTTGGVTASFAMLGDIQIAEPNALIGFAGARVIEETIR
EKLPEGFQRAEYLLEHGMVDMVLARGELAATLGRLLGLLKVGRPDAEAA

Specific function: Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA [H

COG id: COG0777

COG function: function code I; Acetyl-CoA carboxylase beta subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AccD/PCCB family [H]

Homologues:

Organism=Escherichia coli, GI1788655, Length=289, Percent_Identity=50.8650519031142, Blast_Score=288, Evalue=3e-79,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000438
- InterPro:   IPR000022
- InterPro:   IPR011762 [H]

Pfam domain/function: PF01039 Carboxyl_trans [H]

EC number: =6.4.1.2 [H]

Molecular weight: Translated: 31506; Mature: 31506

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: PS50980 COA_CT_NTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWLSEFVRPRIRTLLGRKEAPDNLWHQCSACQQMIFHRELENNLKVCPHCGHHMRATAA
CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
ERLAWTFDGGAFQRIDLPKVPADPLKFHDRKKYPDRLADARRKTGMEDAVLVAHGTVGGH
HHEEEEECCCCEEECCCCCCCCCCHHHCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCH
RAVVAAMDFRFMGGSMGAAMGEALVTAARLAVLQKAALIVFTASGGARMQEGPVSLMQMP
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCHHHHHCC
RTTIAVQMVREAGLPYIVVLTDPTTGGVTASFAMLGDIQIAEPNALIGFAGARVIEETIR
HHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHCCEEEECCCEEEEHHHHHHHHHHHH
EKLPEGFQRAEYLLEHGMVDMVLARGELAATLGRLLGLLKVGRPDAEAA
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNWLSEFVRPRIRTLLGRKEAPDNLWHQCSACQQMIFHRELENNLKVCPHCGHHMRATAA
CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
ERLAWTFDGGAFQRIDLPKVPADPLKFHDRKKYPDRLADARRKTGMEDAVLVAHGTVGGH
HHEEEEECCCCEEECCCCCCCCCCHHHCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCH
RAVVAAMDFRFMGGSMGAAMGEALVTAARLAVLQKAALIVFTASGGARMQEGPVSLMQMP
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCHHHHHCC
RTTIAVQMVREAGLPYIVVLTDPTTGGVTASFAMLGDIQIAEPNALIGFAGARVIEETIR
HHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHCCEEEECCCEEEEHHHHHHHHHHHH
EKLPEGFQRAEYLLEHGMVDMVLARGELAATLGRLLGLLKVGRPDAEAA
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA