| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is folC [H]
Identifier: 148259855
GI number: 148259855
Start: 932765
End: 934078
Strand: Reverse
Name: folC [H]
Synonym: Acry_0844
Alternate gene names: 148259855
Gene position: 934078-932765 (Counterclockwise)
Preceding gene: 148259856
Following gene: 148259854
Centisome position: 27.56
GC content: 73.74
Gene sequence:
>1314_bases GTGAGCGGGGCGGCGCCGGCCCCGGCACCGGCACCGAGCCGGATCGACGCGCGGATCGAGCGGCTGCACGCGCTCTATCC GCGGCTGATCGACCTGCGGCTGGAACGGCTGGAGCGGCTGCTCGAAGCCCTGGGCCATCCGGAGCGGCGGCTGCCGCCGA CCATTCATGTCGCCGGGACCAACGGCAAGGGCAGCGTCTGCGCCTTCCTGCGCGGCATGGTCGAGGCGGCGGGGCTGCGC GCACATGTCTATACCTCGCCGCATCTCGTGCGGTTCAACGAGCGCATCCGGCTGGCCGGCGCGCTGGTCAGCGACGACGA GCTGGACGCAGCGCTCGACGAGGTCGAGCGGGTGAACGACGCCGCGCCGATCACCGTGTTCGAGGCGATCACCGCCGCCG CCTTCGTGCTGTTCGCGGCACGGTCGGCGGAGATCGCGATCATCGAGGTGGGGCTCGGCGGCACCTTCGATGCGACCAAC GTGATCCCGCCGCCCGCCGCCGCCGCGATCACCGCGATCTCGCTCGATCACCGCGAGTTCCTCGGCGAGACGGAAACCGT GATCGCCGCCGAGAAGGCCGGGATCATGAAGCCGGGCAGCCGGGCCGTGACCGGGTTCCAGACGCCGGACGTGCTGGCCG TGCTGGAGTCGCGGGCGAAGGCGGCCGGGGTGCCGCTCGCCGCGCGCGGGCGGCAGTGGCGGATCATGAAGCAGGGCGAG GGCGCGGTGTATGAGGACGAGGAGGGGCGGCTGGAGCTGCCCCGCCCCGCCCTGCCCGGCGCGCACCAGTTCGACAATGC CGGCATCGCCATCGCCGCCCTGCGCGCCGGCGGGTTCGGGCTCGACCAGGACGCCTTCGCGCGCGGCATGGCGGCGGCGG AATGGCCGGCACGGTTGCAGCGCCTTGGGCCGCCCTTGGCCTCGTTGCTGCCGGCGGGATCGGAACTCTGGCTCGACGGC GCGCACAATCCGGGCGGGGCGCAGGCGCTGGCCGAGGTTCTGGCCGGCTGGGAGGGGCCGACGCATCTCGTCGTCGGGAT GAAGCAGGCCAAGGACGTCGCGGAGTTTTTGCGCATCCTGCTGCCGCAGGCGGCATCGGTGCAGGCGGTGGTCGAGCCGG GGCAGCATCTGGCCCTGCCCGTCGAGGCGATCATCGAGGCGTCGGGCGGGGTCGCGACGGCGGGGCCGGATGTGGAGGCC GCGCTGCGGCGCCTCGCCGCGGACGGGACGCCGAAGCGGGTGCTGGTCTGCGGCTCGCTCTATCTCGCCGGGGTGATCCT GGCACGGCAGGAAGCGGCGCCGGCGCAGGGCTGA
Upstream 100 bases:
>100_bases ACGGCATGGTGGACATGGTGCTCGCGCGCGGCGAACTGGCGGCGACACTTGGGCGGCTGCTCGGCCTGCTGAAGGTGGGG CGGCCGGACGCAGAGGCGGC
Downstream 100 bases:
>100_bases TCCCCCTCGCCTTCCGGCCTGCCCGGCTTGCCTGAACCGCGCGATCCACCCGATACTCGCGCGGAGCAAAAAGGGAGACC GGAATGTCCGCCACGATGAA
Product: FolC bifunctional protein
Products: NA
Alternate protein names: Folylpoly-gamma-glutamate synthetase; FPGS; Tetrahydrofolate synthase; Tetrahydrofolylpolyglutamate synthase [H]
Number of amino acids: Translated: 437; Mature: 436
Protein sequence:
>437_residues MSGAAPAPAPAPSRIDARIERLHALYPRLIDLRLERLERLLEALGHPERRLPPTIHVAGTNGKGSVCAFLRGMVEAAGLR AHVYTSPHLVRFNERIRLAGALVSDDELDAALDEVERVNDAAPITVFEAITAAAFVLFAARSAEIAIIEVGLGGTFDATN VIPPPAAAAITAISLDHREFLGETETVIAAEKAGIMKPGSRAVTGFQTPDVLAVLESRAKAAGVPLAARGRQWRIMKQGE GAVYEDEEGRLELPRPALPGAHQFDNAGIAIAALRAGGFGLDQDAFARGMAAAEWPARLQRLGPPLASLLPAGSELWLDG AHNPGGAQALAEVLAGWEGPTHLVVGMKQAKDVAEFLRILLPQAASVQAVVEPGQHLALPVEAIIEASGGVATAGPDVEA ALRRLAADGTPKRVLVCGSLYLAGVILARQEAAPAQG
Sequences:
>Translated_437_residues MSGAAPAPAPAPSRIDARIERLHALYPRLIDLRLERLERLLEALGHPERRLPPTIHVAGTNGKGSVCAFLRGMVEAAGLR AHVYTSPHLVRFNERIRLAGALVSDDELDAALDEVERVNDAAPITVFEAITAAAFVLFAARSAEIAIIEVGLGGTFDATN VIPPPAAAAITAISLDHREFLGETETVIAAEKAGIMKPGSRAVTGFQTPDVLAVLESRAKAAGVPLAARGRQWRIMKQGE GAVYEDEEGRLELPRPALPGAHQFDNAGIAIAALRAGGFGLDQDAFARGMAAAEWPARLQRLGPPLASLLPAGSELWLDG AHNPGGAQALAEVLAGWEGPTHLVVGMKQAKDVAEFLRILLPQAASVQAVVEPGQHLALPVEAIIEASGGVATAGPDVEA ALRRLAADGTPKRVLVCGSLYLAGVILARQEAAPAQG >Mature_436_residues SGAAPAPAPAPSRIDARIERLHALYPRLIDLRLERLERLLEALGHPERRLPPTIHVAGTNGKGSVCAFLRGMVEAAGLRA HVYTSPHLVRFNERIRLAGALVSDDELDAALDEVERVNDAAPITVFEAITAAAFVLFAARSAEIAIIEVGLGGTFDATNV IPPPAAAAITAISLDHREFLGETETVIAAEKAGIMKPGSRAVTGFQTPDVLAVLESRAKAAGVPLAARGRQWRIMKQGEG AVYEDEEGRLELPRPALPGAHQFDNAGIAIAALRAGGFGLDQDAFARGMAAAEWPARLQRLGPPLASLLPAGSELWLDGA HNPGGAQALAEVLAGWEGPTHLVVGMKQAKDVAEFLRILLPQAASVQAVVEPGQHLALPVEAIIEASGGVATAGPDVEAA LRRLAADGTPKRVLVCGSLYLAGVILARQEAAPAQG
Specific function: Conversion of folates to polyglutamate derivatives. It preferes 5,10-methylenetetrahydrofolate, rather than 10- formyltetrahydrofolate as folate substrate [H]
COG id: COG0285
COG function: function code H; Folylpolyglutamate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the folylpolyglutamate synthase family [H]
Homologues:
Organism=Homo sapiens, GI66932990, Length=348, Percent_Identity=31.0344827586207, Blast_Score=133, Evalue=3e-31, Organism=Homo sapiens, GI66932984, Length=348, Percent_Identity=31.0344827586207, Blast_Score=133, Evalue=3e-31, Organism=Escherichia coli, GI1788654, Length=426, Percent_Identity=31.924882629108, Blast_Score=159, Evalue=3e-40, Organism=Caenorhabditis elegans, GI17553148, Length=339, Percent_Identity=30.6784660766962, Blast_Score=142, Evalue=3e-34, Organism=Caenorhabditis elegans, GI71984923, Length=339, Percent_Identity=30.6784660766962, Blast_Score=142, Evalue=4e-34, Organism=Caenorhabditis elegans, GI17553150, Length=339, Percent_Identity=30.6784660766962, Blast_Score=142, Evalue=4e-34, Organism=Saccharomyces cerevisiae, GI6323760, Length=424, Percent_Identity=30.188679245283, Blast_Score=174, Evalue=4e-44, Organism=Saccharomyces cerevisiae, GI6324815, Length=289, Percent_Identity=27.681660899654, Blast_Score=102, Evalue=9e-23, Organism=Saccharomyces cerevisiae, GI6322718, Length=426, Percent_Identity=27.2300469483568, Blast_Score=94, Evalue=4e-20, Organism=Drosophila melanogaster, GI24641571, Length=231, Percent_Identity=33.3333333333333, Blast_Score=127, Evalue=1e-29, Organism=Drosophila melanogaster, GI24581568, Length=200, Percent_Identity=32.5, Blast_Score=98, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018109 - InterPro: IPR001645 - InterPro: IPR004101 - InterPro: IPR013221 [H]
Pfam domain/function: PF02875 Mur_ligase_C; PF08245 Mur_ligase_M [H]
EC number: =6.3.2.17 [H]
Molecular weight: Translated: 45672; Mature: 45541
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: PS01011 FOLYLPOLYGLU_SYNT_1 ; PS01012 FOLYLPOLYGLU_SYNT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGAAPAPAPAPSRIDARIERLHALYPRLIDLRLERLERLLEALGHPERRLPPTIHVAGT CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECC NGKGSVCAFLRGMVEAAGLRAHVYTSPHLVRFNERIRLAGALVSDDELDAALDEVERVND CCCCHHHHHHHHHHHHCCCEEEEECCCEEEEECCCEEEEEEEECCHHHHHHHHHHHHHCC AAPITVFEAITAAAFVLFAARSAEIAIIEVGLGGTFDATNVIPPPAAAAITAISLDHREF CCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHEEEECHHHHH LGETETVIAAEKAGIMKPGSRAVTGFQTPDVLAVLESRAKAAGVPLAARGRQWRIMKQGE CCCCHHEEEHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEECCCCEEEEEECCC GAVYEDEEGRLELPRPALPGAHQFDNAGIAIAALRAGGFGLDQDAFARGMAAAEWPARLQ CCEEECCCCCEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHCCHHHHHHHHHH RLGPPLASLLPAGSELWLDGAHNPGGAQALAEVLAGWEGPTHLVVGMKQAKDVAEFLRIL HHCCCHHHHCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHH LPQAASVQAVVEPGQHLALPVEAIIEASGGVATAGPDVEAALRRLAADGTPKRVLVCGSL CCCCCCCHHHHCCCCCEECCHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEHHH YLAGVILARQEAAPAQG HHHHHHHHHHCCCCCCC >Mature Secondary Structure SGAAPAPAPAPSRIDARIERLHALYPRLIDLRLERLERLLEALGHPERRLPPTIHVAGT CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECC NGKGSVCAFLRGMVEAAGLRAHVYTSPHLVRFNERIRLAGALVSDDELDAALDEVERVND CCCCHHHHHHHHHHHHCCCEEEEECCCEEEEECCCEEEEEEEECCHHHHHHHHHHHHHCC AAPITVFEAITAAAFVLFAARSAEIAIIEVGLGGTFDATNVIPPPAAAAITAISLDHREF CCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHEEEECHHHHH LGETETVIAAEKAGIMKPGSRAVTGFQTPDVLAVLESRAKAAGVPLAARGRQWRIMKQGE CCCCHHEEEHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEECCCCEEEEEECCC GAVYEDEEGRLELPRPALPGAHQFDNAGIAIAALRAGGFGLDQDAFARGMAAAEWPARLQ CCEEECCCCCEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHCCHHHHHHHHHH RLGPPLASLLPAGSELWLDGAHNPGGAQALAEVLAGWEGPTHLVVGMKQAKDVAEFLRIL HHCCCHHHHCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHH LPQAASVQAVVEPGQHLALPVEAIIEASGGVATAGPDVEAALRRLAADGTPKRVLVCGSL CCCCCCCHHHHCCCCCEECCHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEHHH YLAGVILARQEAAPAQG HHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8419299; 9384377; 2553669 [H]