| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is 148259800
Identifier: 148259800
GI number: 148259800
Start: 875244
End: 876911
Strand: Reverse
Name: 148259800
Synonym: Acry_0789
Alternate gene names: NA
Gene position: 876911-875244 (Counterclockwise)
Preceding gene: 148259801
Following gene: 148259799
Centisome position: 25.87
GC content: 49.16
Gene sequence:
>1668_bases ATGCAACTTCCCCAGCCGACGCATGCCAAGTATTCCGGCCTTCTCAATGACATTAAGCGCGGTCAGATCAAAATTCCACA ATTTCAGCGTGATTTTGTCTGGGGCCTCCAAAAATCAGCAGCGCTTATTGACAGTATCGTGAAGGGTTACCCGGTAGGGA CTTTTATCTTCTGGGCAACCAAGGAGCGTTTGCGTCATGTGCGGGACATAGGTTCCGAGAATTTGCCGCCTCCCAGAGAA GGCGAAACCGCAGCCTACGTTCTTGACGGGCAACAGCGGATCACCAGCCTATACGCGACCCTAAAGGGCCTCGCAGTCAC GCGGGAATCCGGTCAGATCGACGATTTTTCGAAGGTTTACATCGATCTCGAAGCGACCGAGGATGACCAAATCGTGGTTA CCGAAGTAAGCGACAAGAAAGAAAAGAGTTACATTCGCCTCACCGATCTTCTCTATGGCGGCTTGACGTCGCTCGCGGCC TTCGACGGCGCATACCACGGCAAGCTCGAAGAATACAAACGACGCATTGAAAGCTACGACTTCCCGGTCATTGAGGTTCG TGACGTCCCAATCGATGTCGCGACCGAAATCTTCACGCGCATCAATGTCGGAGGAATGCCGCTCACGCTTTTCGAGATTA TGGTCGCAAAGACCTATGACGAAGCGCGGGGATTTGATCTCTCACAGAAGTTCGATAAGCTAGTTGAAAGCCTAGAACCC GTCAATTATGAAACGATATCCGACGCCATCATACTACAATTGATCGCACTCATCCTTAAGAAGGAGTGCAAGAAACAGAT CATACTTAAAATCGCAAAGAAGGAGTTCATCGATACCTGGGGCAGCATTATCAATGCACTGCAACAAGCTGTCGAGCATT TTCGCAACCGCTACGGTATACCTGTTTCCGCGCTACTTCCCTATAACGCTTTACTCGTACCTTTCGCCTACTATTTCTAT CACCACCCAGATAATCCAAGCGCGGCACAACGGAAGCTCTTAGAGGATTTCTTTTGGCGTGCCTCGCTAGGCGGCCGGTA TTCTTCGTCAGTCGAAAGTAAACTTGCCCAGGATATACGGCGTATCGACGCCATCCTTAATGATGAGTCGCCTGACTACG ATTGGGGTGTCGACGTTTCGCCAGATTTCATTTTGGAGAACGGATGGTTCAATACGAGTCGCAGTTTCGTGAAGGCAATT CTGTGCCTTTACGCGCATCGCGCACCGAAGTCCTTCAGGGACAACTCAAATGTCAATATCAGCAATAACTGGCTTAAGCA ATCCAATAGCAAGAACTACCATCATTTTTTTCCAAAGTCATACTTAAGTAAAAAAAATGAAGACGATAGGCGCATCAACA ACGTCGTCAATATCACCATCGTCGACGACTACCTCAATAAGCGTGACATCGGGGCTAAACCGCCCTCCCGCTACATGAAG ACGTTTGCCAAAGAGAACGACGAAATTGACGTAACGATGAAGACCCATCTTATCGAGGATCTTGATAAGTTCGGCATTTG GGTTGACGATTATGATGCATTTTTGACCATGCGCTCCAAGGCGATCAGCCGAGAACTTAAAAAGCGGATCATTGCCCGCG ACATCGACAAGCAGGGCCAAGTCTCTACTGCGAACGATCTTGAGGAGGAGGCTGCTAGCTTCGAATAG
Upstream 100 bases:
>100_bases AAGTTGCACTCCTTGTAGCGAGGCCGTAAGGTTCCAAAGGAAGCTGCAGGCCTTACAACCTTCCGCTCCGTCTCACCCCT CGTACTGCCAGAGACTCAAG
Downstream 100 bases:
>100_bases CTATCATCGGCAGACTACAGTTTCCGTTCAAAAAAGTTGGTCACCTATCAAGTAGATGAGCGTGTCAGATCGGCTTGGGC GGCTTCACGGATCGCTTCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 555; Mature: 555
Protein sequence:
>555_residues MQLPQPTHAKYSGLLNDIKRGQIKIPQFQRDFVWGLQKSAALIDSIVKGYPVGTFIFWATKERLRHVRDIGSENLPPPRE GETAAYVLDGQQRITSLYATLKGLAVTRESGQIDDFSKVYIDLEATEDDQIVVTEVSDKKEKSYIRLTDLLYGGLTSLAA FDGAYHGKLEEYKRRIESYDFPVIEVRDVPIDVATEIFTRINVGGMPLTLFEIMVAKTYDEARGFDLSQKFDKLVESLEP VNYETISDAIILQLIALILKKECKKQIILKIAKKEFIDTWGSIINALQQAVEHFRNRYGIPVSALLPYNALLVPFAYYFY HHPDNPSAAQRKLLEDFFWRASLGGRYSSSVESKLAQDIRRIDAILNDESPDYDWGVDVSPDFILENGWFNTSRSFVKAI LCLYAHRAPKSFRDNSNVNISNNWLKQSNSKNYHHFFPKSYLSKKNEDDRRINNVVNITIVDDYLNKRDIGAKPPSRYMK TFAKENDEIDVTMKTHLIEDLDKFGIWVDDYDAFLTMRSKAISRELKKRIIARDIDKQGQVSTANDLEEEAASFE
Sequences:
>Translated_555_residues MQLPQPTHAKYSGLLNDIKRGQIKIPQFQRDFVWGLQKSAALIDSIVKGYPVGTFIFWATKERLRHVRDIGSENLPPPRE GETAAYVLDGQQRITSLYATLKGLAVTRESGQIDDFSKVYIDLEATEDDQIVVTEVSDKKEKSYIRLTDLLYGGLTSLAA FDGAYHGKLEEYKRRIESYDFPVIEVRDVPIDVATEIFTRINVGGMPLTLFEIMVAKTYDEARGFDLSQKFDKLVESLEP VNYETISDAIILQLIALILKKECKKQIILKIAKKEFIDTWGSIINALQQAVEHFRNRYGIPVSALLPYNALLVPFAYYFY HHPDNPSAAQRKLLEDFFWRASLGGRYSSSVESKLAQDIRRIDAILNDESPDYDWGVDVSPDFILENGWFNTSRSFVKAI LCLYAHRAPKSFRDNSNVNISNNWLKQSNSKNYHHFFPKSYLSKKNEDDRRINNVVNITIVDDYLNKRDIGAKPPSRYMK TFAKENDEIDVTMKTHLIEDLDKFGIWVDDYDAFLTMRSKAISRELKKRIIARDIDKQGQVSTANDLEEEAASFE >Mature_555_residues MQLPQPTHAKYSGLLNDIKRGQIKIPQFQRDFVWGLQKSAALIDSIVKGYPVGTFIFWATKERLRHVRDIGSENLPPPRE GETAAYVLDGQQRITSLYATLKGLAVTRESGQIDDFSKVYIDLEATEDDQIVVTEVSDKKEKSYIRLTDLLYGGLTSLAA FDGAYHGKLEEYKRRIESYDFPVIEVRDVPIDVATEIFTRINVGGMPLTLFEIMVAKTYDEARGFDLSQKFDKLVESLEP VNYETISDAIILQLIALILKKECKKQIILKIAKKEFIDTWGSIINALQQAVEHFRNRYGIPVSALLPYNALLVPFAYYFY HHPDNPSAAQRKLLEDFFWRASLGGRYSSSVESKLAQDIRRIDAILNDESPDYDWGVDVSPDFILENGWFNTSRSFVKAI LCLYAHRAPKSFRDNSNVNISNNWLKQSNSKNYHHFFPKSYLSKKNEDDRRINNVVNITIVDDYLNKRDIGAKPPSRYMK TFAKENDEIDVTMKTHLIEDLDKFGIWVDDYDAFLTMRSKAISRELKKRIIARDIDKQGQVSTANDLEEEAASFE
Specific function: Unknown
COG id: COG3472
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63699; Mature: 63699
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLPQPTHAKYSGLLNDIKRGQIKIPQFQRDFVWGLQKSAALIDSIVKGYPVGTFIFWAT CCCCCCCHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEHHH KERLRHVRDIGSENLPPPREGETAAYVLDGQQRITSLYATLKGLAVTRESGQIDDFSKVY HHHHHHHHHCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHEECCCCCCCCCEEEE IDLEATEDDQIVVTEVSDKKEKSYIRLTDLLYGGLTSLAAFDGAYHGKLEEYKRRIESYD EEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHCC FPVIEVRDVPIDVATEIFTRINVGGMPLTLFEIMVAKTYDEARGFDLSQKFDKLVESLEP CCEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC VNYETISDAIILQLIALILKKECKKQIILKIAKKEFIDTWGSIINALQQAVEHFRNRYGI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PVSALLPYNALLVPFAYYFYHHPDNPSAAQRKLLEDFFWRASLGGRYSSSVESKLAQDIR CHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH RIDAILNDESPDYDWGVDVSPDFILENGWFNTSRSFVKAILCLYAHRAPKSFRDNSNVNI HHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC SNNWLKQSNSKNYHHFFPKSYLSKKNEDDRRINNVVNITIVDDYLNKRDIGAKPPSRYMK CHHHHHCCCCCCCCCCCCHHHHCCCCCCHHHHHCEEEEEEECCCCCCCCCCCCCHHHHHH TFAKENDEIDVTMKTHLIEDLDKFGIWVDDYDAFLTMRSKAISRELKKRIIARDIDKQGQ HHHCCCCCEEEEHHHHHHHHHHHHCCEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC VSTANDLEEEAASFE CCCHHHHHHHHHCCC >Mature Secondary Structure MQLPQPTHAKYSGLLNDIKRGQIKIPQFQRDFVWGLQKSAALIDSIVKGYPVGTFIFWAT CCCCCCCHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEHHH KERLRHVRDIGSENLPPPREGETAAYVLDGQQRITSLYATLKGLAVTRESGQIDDFSKVY HHHHHHHHHCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHEECCCCCCCCCEEEE IDLEATEDDQIVVTEVSDKKEKSYIRLTDLLYGGLTSLAAFDGAYHGKLEEYKRRIESYD EEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHCC FPVIEVRDVPIDVATEIFTRINVGGMPLTLFEIMVAKTYDEARGFDLSQKFDKLVESLEP CCEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC VNYETISDAIILQLIALILKKECKKQIILKIAKKEFIDTWGSIINALQQAVEHFRNRYGI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PVSALLPYNALLVPFAYYFYHHPDNPSAAQRKLLEDFFWRASLGGRYSSSVESKLAQDIR CHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH RIDAILNDESPDYDWGVDVSPDFILENGWFNTSRSFVKAILCLYAHRAPKSFRDNSNVNI HHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC SNNWLKQSNSKNYHHFFPKSYLSKKNEDDRRINNVVNITIVDDYLNKRDIGAKPPSRYMK CHHHHHCCCCCCCCCCCCHHHHCCCCCCHHHHHCEEEEEEECCCCCCCCCCCCCHHHHHH TFAKENDEIDVTMKTHLIEDLDKFGIWVDDYDAFLTMRSKAISRELKKRIIARDIDKQGQ HHHCCCCCEEEEHHHHHHHHHHHHCCEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC VSTANDLEEEAASFE CCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA