Definition Acidiphilium cryptum JF-5 chromosome, complete genome.
Accession NC_009484
Length 3,389,227

Click here to switch to the map view.

The map label for this gene is 148259801

Identifier: 148259801

GI number: 148259801

Start: 877365

End: 878573

Strand: Reverse

Name: 148259801

Synonym: Acry_0790

Alternate gene names: NA

Gene position: 878573-877365 (Counterclockwise)

Preceding gene: 148259808

Following gene: 148259800

Centisome position: 25.92

GC content: 62.45

Gene sequence:

>1209_bases
ATGACCGAAGATAGATTACCACTGGCTGAGCTACTGGCCAAAGCCGGGGACGGCGATTTTCTGCGCAGCGTTGCGGAGGC
GGTGGTTCAACTGCTGATGGAGACGGATGTGGATGGGCTGATCGGCGCCAGCCGCTACGAGCGCAGCGGCGAGCGCGCGA
CCTATCGCAACGGCTACCGGGAACGCGCATTGGACACGCGGCTTGGCAGCTTGCAGCTTCGGATCCCGAAGCTGCGGCAG
GGGAGCTACTTCCCGCCGTTCCTGGAAGCTCGCCGGACCTCGGAGAAGGCGCTGGCCGCGGTCATCCAGGAAGCCTGGAT
TGGCGGCGTCTCGACCCGGCGGGTAGACGAGCTGGTGCAGGCCATGGGGCTGACGGGGATCAGCAAGAGCACGGTCTCGA
AACTGTGCAAGGACATCGATGAGAGGGTGAACGCCTTCCTCGACCGGCCACTCGCCGGCGAGTGGCCGTATCTGTGGTTG
GATGCGACCTATCTCAAGCAGCGCGAAGGTGGGCGGATCGTCTCAGTTGCGGCGATAATCGCAGTGGCGGTGAACACCGA
CGGTCGGCGCGAGATCGTCGGCCTGCACATCGGCCCGTCCGAGGCGGAGACCTTCTGGTCGACCTTTCTCAAGAGCTTGG
TCCGCCGTGGGTTGCGTGAGGTGAAACTGGTGATCTCCGATGCTCATGAAGGGTTGAAGGCGGCGATCCGCCGGGTGATG
GGGGCATCCTGGCAAAGATGCCGCGTTCACTGGATGCGCAACGCCTTGTCCTATGTGCCGAAGGGGCAGCAGAGCATGGT
GTCTGCAGCGTTGCGTCAGGCGTTTATCCAGCCGGATCGCGTCAGTGCCAGCCAGACCCTGCGCCATGTGGCCGACCAGC
TCCGGGGCAAATGGCCAAAACTTGGCGCGTTCATCGACGACAGTGAAACCGACGTGCTGGCGCACATGGACTTTCCCGCC
CAGCACCGAACCAAAATTCACTCGACGAATCCGCTCGAACGCCTGAACAAGGAGGTCAAGCGCCGCGCCGATGTCGTCGG
CATCTTTCCCAATGAAGGTTCGATCATCCGCCTGATCGGGGCCGTGCTGCTCGAGGCCAACGACGAATGGCAAACACAGA
ACCGCTATATGCAGATCGAGGGAATGGTCGAACTCATGGCACCCGCCATCGATGCCGATACACCACGAATTTCCACCGTC
GCCGCGTGA

Upstream 100 bases:

>100_bases
GTGGACTTTTGGGCCCTGTAACGGTGTAGTTTGAGGTGGCCATCGGATCAGTCGGCTATGGTGGAGTTGCGAGACTTCAA
CCTGAAGCCTGGAGAACCCG

Downstream 100 bases:

>100_bases
CCATTGGCCGCTTCAGCTACACCAGAATTTCCACCACATTGACGGACGCTATCGGCCGTTCCACCCCAACACTTCTCAGT
GGAAAGCAACAACGGGACCC

Product: transposase, mutator type

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 401

Protein sequence:

>402_residues
MTEDRLPLAELLAKAGDGDFLRSVAEAVVQLLMETDVDGLIGASRYERSGERATYRNGYRERALDTRLGSLQLRIPKLRQ
GSYFPPFLEARRTSEKALAAVIQEAWIGGVSTRRVDELVQAMGLTGISKSTVSKLCKDIDERVNAFLDRPLAGEWPYLWL
DATYLKQREGGRIVSVAAIIAVAVNTDGRREIVGLHIGPSEAETFWSTFLKSLVRRGLREVKLVISDAHEGLKAAIRRVM
GASWQRCRVHWMRNALSYVPKGQQSMVSAALRQAFIQPDRVSASQTLRHVADQLRGKWPKLGAFIDDSETDVLAHMDFPA
QHRTKIHSTNPLERLNKEVKRRADVVGIFPNEGSIIRLIGAVLLEANDEWQTQNRYMQIEGMVELMAPAIDADTPRISTV
AA

Sequences:

>Translated_402_residues
MTEDRLPLAELLAKAGDGDFLRSVAEAVVQLLMETDVDGLIGASRYERSGERATYRNGYRERALDTRLGSLQLRIPKLRQ
GSYFPPFLEARRTSEKALAAVIQEAWIGGVSTRRVDELVQAMGLTGISKSTVSKLCKDIDERVNAFLDRPLAGEWPYLWL
DATYLKQREGGRIVSVAAIIAVAVNTDGRREIVGLHIGPSEAETFWSTFLKSLVRRGLREVKLVISDAHEGLKAAIRRVM
GASWQRCRVHWMRNALSYVPKGQQSMVSAALRQAFIQPDRVSASQTLRHVADQLRGKWPKLGAFIDDSETDVLAHMDFPA
QHRTKIHSTNPLERLNKEVKRRADVVGIFPNEGSIIRLIGAVLLEANDEWQTQNRYMQIEGMVELMAPAIDADTPRISTV
AA
>Mature_401_residues
TEDRLPLAELLAKAGDGDFLRSVAEAVVQLLMETDVDGLIGASRYERSGERATYRNGYRERALDTRLGSLQLRIPKLRQG
SYFPPFLEARRTSEKALAAVIQEAWIGGVSTRRVDELVQAMGLTGISKSTVSKLCKDIDERVNAFLDRPLAGEWPYLWLD
ATYLKQREGGRIVSVAAIIAVAVNTDGRREIVGLHIGPSEAETFWSTFLKSLVRRGLREVKLVISDAHEGLKAAIRRVMG
ASWQRCRVHWMRNALSYVPKGQQSMVSAALRQAFIQPDRVSASQTLRHVADQLRGKWPKLGAFIDDSETDVLAHMDFPAQ
HRTKIHSTNPLERLNKEVKRRADVVGIFPNEGSIIRLIGAVLLEANDEWQTQNRYMQIEGMVELMAPAIDADTPRISTVA
A

Specific function: Required for the transposition of the insertion element [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase mutator family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001207 [H]

Pfam domain/function: PF00872 Transposase_mut [H]

EC number: NA

Molecular weight: Translated: 44924; Mature: 44793

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: PS00018 EF_HAND_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEDRLPLAELLAKAGDGDFLRSVAEAVVQLLMETDVDGLIGASRYERSGERATYRNGYR
CCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHCCHHHHCCCCCHHHHCCHH
ERALDTRLGSLQLRIPKLRQGSYFPPFLEARRTSEKALAAVIQEAWIGGVSTRRVDELVQ
HHHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
AMGLTGISKSTVSKLCKDIDERVNAFLDRPLAGEWPYLWLDATYLKQREGGRIVSVAAII
HHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHCCCCCHHHHHHHH
AVAVNTDGRREIVGLHIGPSEAETFWSTFLKSLVRRGLREVKLVISDAHEGLKAAIRRVM
HHHCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GASWQRCRVHWMRNALSYVPKGQQSMVSAALRQAFIQPDRVSASQTLRHVADQLRGKWPK
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCC
LGAFIDDSETDVLAHMDFPAQHRTKIHSTNPLERLNKEVKRRADVVGIFPNEGSIIRLIG
CCCEECCCCCCEEEECCCCHHHHHHCCCCCHHHHHHHHHHHHCCEEEEECCCCCHHHHHH
AVLLEANDEWQTQNRYMQIEGMVELMAPAIDADTPRISTVAA
HHHHCCCCCHHHCCCCEEHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
TEDRLPLAELLAKAGDGDFLRSVAEAVVQLLMETDVDGLIGASRYERSGERATYRNGYR
CCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHCCHHHHCCCCCHHHHCCHH
ERALDTRLGSLQLRIPKLRQGSYFPPFLEARRTSEKALAAVIQEAWIGGVSTRRVDELVQ
HHHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
AMGLTGISKSTVSKLCKDIDERVNAFLDRPLAGEWPYLWLDATYLKQREGGRIVSVAAII
HHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHCCCCCHHHHHHHH
AVAVNTDGRREIVGLHIGPSEAETFWSTFLKSLVRRGLREVKLVISDAHEGLKAAIRRVM
HHHCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GASWQRCRVHWMRNALSYVPKGQQSMVSAALRQAFIQPDRVSASQTLRHVADQLRGKWPK
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCC
LGAFIDDSETDVLAHMDFPAQHRTKIHSTNPLERLNKEVKRRADVVGIFPNEGSIIRLIG
CCCEECCCCCCEEEECCCCHHHHHHCCCCCHHHHHHHHHHHHCCEEEEECCCCCHHHHHH
AVLLEANDEWQTQNRYMQIEGMVELMAPAIDADTPRISTVAA
HHHHCCCCCHHHCCCCEEHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1663885; 12788972 [H]