| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is aatA [H]
Identifier: 148259752
GI number: 148259752
Start: 828392
End: 829594
Strand: Reverse
Name: aatA [H]
Synonym: Acry_0740
Alternate gene names: 148259752
Gene position: 829594-828392 (Counterclockwise)
Preceding gene: 148259755
Following gene: 148259751
Centisome position: 24.48
GC content: 66.17
Gene sequence:
>1203_bases ATGAACCTGATCGCCGCACGCCTGAACCGGATCAGCCCGAGCCAGACGATCGCCATTTCGACCAAGGCGCGCCAGCTCAA GGCCGAGGGCCGCGACATCATCAGCCTCTCCGCCGGCGAGCCTGATTTCGACACGCCGGACCACATCAAGCGCGCCGCCA TCGCCGCGATAGAGGCGGGCGAGACCAAGTATACCGACGTCGCCGGCACCATGGCGCTGCGCAAGGCCGTTGCCGCGAAA TTCAAGCGCGACAACGGGATCGACTACACGCCGCAGGAGATCATCGTCTCGACCGGCGGCAAGCAGGTCATCTTCAACGC CATGCTCGCCACCGTCGAGGCCGGCGACGAGGTGATCATCCCGACACCGTGCTGGGTCAGCTATCCGGACATCGTCCAGC TCGCCGAGGGCAAGCCGGTCTTCGTCCCCTGCAGCCAGAACAACGGCTTCAAGCTGCGCGCCGAGGATCTCGAGGCGGCG ATCACGCCGAAGACCAAGTGGCTGATGCTGAACTCGCCTTCGAACCCGACCGGGGCGGCCTATTCGGCGGAAGACCTCCG CCCGATCTGCGACGTGCTGCTGCGCCACCCCGACATCTGGGTGTTCACCGACGACATCTACGAGAAGCTCGTCTATGACG GCTTTGCTCCGGCCACCATCGTCGGCGTCGAGCCGAAGCTGCGCGAGCGCACGGTGACGATGAACGGCTGCTCCAAGGCC TATGCGATGACCGGCTGGCGAATCGGCTTCTGCGGCGCGCCGGTCCAGCTTATCAAGGCGATGGACAAGCTGCAGAGCCA GTCGACCTCGAACACCTCCTCGGTGAGCCAGGTCGCGGCCCTCGCCGCGCTGGAAGGCCCGGAGGACGCGATCGACGTGA TGCGCGCCGCCTATCGCGAGCGGCGGGATCTCGTGGTCGCGATGCTCAACGAGGCCCCGGGCATCACCTGCTCGAAGCCC GAGGGCGCGTTCTACGTCTTCCCCTCGATCGCCGGCTGCCTCGGCAAGACCTCGGCGGGCGGAACAAAAATCGTCGATGA CGAGGCCTTTGTCACGGCGCTGCTGGAAGAGCAGGGAGTCGCGGCCGTGCATGGCAGCGCCTTCATCTATCCCGGCTATT TCCGGGTCAGCTACGCGACCTCGACCGAGGCGCTGCGCGACGCCTGCACCCGCATCCAGACCTTCTGCCAGGGGCTGCGC TGA
Upstream 100 bases:
>100_bases CCCGTCATGAGCGGAGTTCGTGCCGGCCCGCGCATCAGGGCCATGTTCATCGCGCGGCAGTTCGGTTACATCGGGGCCGT TGTCACGGGGAGCATCGCAC
Downstream 100 bases:
>100_bases ACCGCGGCTTCCGCCTCTCCCGACCGCCCCACGGTTTTTCAGGCCCGCGCGATGCAGATCGCGCGGGCCTTTGCGTCGAT TCGGCATTGTGCGGCCACCC
Product: class I and II aminotransferase
Products: NA
Alternate protein names: AspAT; Transaminase A [H]
Number of amino acids: Translated: 400; Mature: 400
Protein sequence:
>400_residues MNLIAARLNRISPSQTIAISTKARQLKAEGRDIISLSAGEPDFDTPDHIKRAAIAAIEAGETKYTDVAGTMALRKAVAAK FKRDNGIDYTPQEIIVSTGGKQVIFNAMLATVEAGDEVIIPTPCWVSYPDIVQLAEGKPVFVPCSQNNGFKLRAEDLEAA ITPKTKWLMLNSPSNPTGAAYSAEDLRPICDVLLRHPDIWVFTDDIYEKLVYDGFAPATIVGVEPKLRERTVTMNGCSKA YAMTGWRIGFCGAPVQLIKAMDKLQSQSTSNTSSVSQVAALAALEGPEDAIDVMRAAYRERRDLVVAMLNEAPGITCSKP EGAFYVFPSIAGCLGKTSAGGTKIVDDEAFVTALLEEQGVAAVHGSAFIYPGYFRVSYATSTEALRDACTRIQTFCQGLR
Sequences:
>Translated_400_residues MNLIAARLNRISPSQTIAISTKARQLKAEGRDIISLSAGEPDFDTPDHIKRAAIAAIEAGETKYTDVAGTMALRKAVAAK FKRDNGIDYTPQEIIVSTGGKQVIFNAMLATVEAGDEVIIPTPCWVSYPDIVQLAEGKPVFVPCSQNNGFKLRAEDLEAA ITPKTKWLMLNSPSNPTGAAYSAEDLRPICDVLLRHPDIWVFTDDIYEKLVYDGFAPATIVGVEPKLRERTVTMNGCSKA YAMTGWRIGFCGAPVQLIKAMDKLQSQSTSNTSSVSQVAALAALEGPEDAIDVMRAAYRERRDLVVAMLNEAPGITCSKP EGAFYVFPSIAGCLGKTSAGGTKIVDDEAFVTALLEEQGVAAVHGSAFIYPGYFRVSYATSTEALRDACTRIQTFCQGLR >Mature_400_residues MNLIAARLNRISPSQTIAISTKARQLKAEGRDIISLSAGEPDFDTPDHIKRAAIAAIEAGETKYTDVAGTMALRKAVAAK FKRDNGIDYTPQEIIVSTGGKQVIFNAMLATVEAGDEVIIPTPCWVSYPDIVQLAEGKPVFVPCSQNNGFKLRAEDLEAA ITPKTKWLMLNSPSNPTGAAYSAEDLRPICDVLLRHPDIWVFTDDIYEKLVYDGFAPATIVGVEPKLRERTVTMNGCSKA YAMTGWRIGFCGAPVQLIKAMDKLQSQSTSNTSSVSQVAALAALEGPEDAIDVMRAAYRERRDLVVAMLNEAPGITCSKP EGAFYVFPSIAGCLGKTSAGGTKIVDDEAFVTALLEEQGVAAVHGSAFIYPGYFRVSYATSTEALRDACTRIQTFCQGLR
Specific function: Required for symbiotic nitrogen fixation [H]
COG id: COG0436
COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI56713254, Length=407, Percent_Identity=28.009828009828, Blast_Score=147, Evalue=1e-35, Organism=Homo sapiens, GI56713256, Length=357, Percent_Identity=28.8515406162465, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI95147551, Length=363, Percent_Identity=28.6501377410468, Blast_Score=145, Evalue=6e-35, Organism=Homo sapiens, GI169881279, Length=363, Percent_Identity=28.6501377410468, Blast_Score=145, Evalue=6e-35, Organism=Homo sapiens, GI169881281, Length=360, Percent_Identity=25.2777777777778, Blast_Score=105, Evalue=7e-23, Organism=Homo sapiens, GI4507369, Length=386, Percent_Identity=21.5025906735751, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI19263340, Length=372, Percent_Identity=22.8494623655914, Blast_Score=73, Evalue=5e-13, Organism=Homo sapiens, GI215599424, Length=372, Percent_Identity=22.8494623655914, Blast_Score=73, Evalue=5e-13, Organism=Homo sapiens, GI4885351, Length=367, Percent_Identity=24.5231607629428, Blast_Score=66, Evalue=5e-11, Organism=Escherichia coli, GI1788627, Length=393, Percent_Identity=29.5165394402036, Blast_Score=176, Evalue=2e-45, Organism=Escherichia coli, GI1786816, Length=373, Percent_Identity=29.2225201072386, Blast_Score=157, Evalue=9e-40, Organism=Escherichia coli, GI1788722, Length=332, Percent_Identity=32.2289156626506, Blast_Score=145, Evalue=4e-36, Organism=Escherichia coli, GI1790797, Length=304, Percent_Identity=25, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1787710, Length=214, Percent_Identity=28.0373831775701, Blast_Score=67, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17567663, Length=379, Percent_Identity=24.2744063324538, Blast_Score=121, Evalue=8e-28, Organism=Caenorhabditis elegans, GI71994472, Length=385, Percent_Identity=25.7142857142857, Blast_Score=118, Evalue=7e-27, Organism=Caenorhabditis elegans, GI71994476, Length=385, Percent_Identity=25.7142857142857, Blast_Score=117, Evalue=9e-27, Organism=Caenorhabditis elegans, GI17567369, Length=364, Percent_Identity=25.2747252747253, Blast_Score=100, Evalue=2e-21, Organism=Caenorhabditis elegans, GI71981209, Length=371, Percent_Identity=23.4501347708895, Blast_Score=81, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6322401, Length=317, Percent_Identity=26.1829652996845, Blast_Score=113, Evalue=5e-26, Organism=Saccharomyces cerevisiae, GI6320317, Length=347, Percent_Identity=24.207492795389, Blast_Score=82, Evalue=2e-16, Organism=Drosophila melanogaster, GI28573069, Length=356, Percent_Identity=25.561797752809, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI24646114, Length=356, Percent_Identity=25.561797752809, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI28573067, Length=356, Percent_Identity=25.561797752809, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI28573065, Length=356, Percent_Identity=25.561797752809, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI18859735, Length=384, Percent_Identity=24.4791666666667, Blast_Score=116, Evalue=2e-26, Organism=Drosophila melanogaster, GI24641770, Length=410, Percent_Identity=25.3658536585366, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI24641760, Length=410, Percent_Identity=25.3658536585366, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI24641768, Length=410, Percent_Identity=25.3658536585366, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI24641766, Length=410, Percent_Identity=25.3658536585366, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI24641764, Length=410, Percent_Identity=25.3658536585366, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI45551451, Length=410, Percent_Identity=25.3658536585366, Blast_Score=84, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001176 - InterPro: IPR004839 - InterPro: IPR004838 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.6.1.1 [H]
Molecular weight: Translated: 43147; Mature: 43147
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: PS00105 AA_TRANSFER_CLASS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLIAARLNRISPSQTIAISTKARQLKAEGRDIISLSAGEPDFDTPDHIKRAAIAAIEAG CCCHHHHHHCCCCCCEEEEEHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHEECC ETKYTDVAGTMALRKAVAAKFKRDNGIDYTPQEIIVSTGGKQVIFNAMLATVEAGDEVII CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEEECCCHHHHHHHHHHHHCCCCEEEE PTPCWVSYPDIVQLAEGKPVFVPCSQNNGFKLRAEDLEAAITPKTKWLMLNSPSNPTGAA CCCCCCCCHHHHHHCCCCEEEEECCCCCCEEEECCCCCEEECCCEEEEEEECCCCCCCCC YSAEDLRPICDVLLRHPDIWVFTDDIYEKLVYDGFAPATIVGVEPKLRERTVTMNGCSKA CCHHHHHHHHHHHHCCCCEEEECHHHHHHHHHCCCCCEEEEECCCCHHHCEEEECCCCHH YAMTGWRIGFCGAPVQLIKAMDKLQSQSTSNTSSVSQVAALAALEGPEDAIDVMRAAYRE HHCCCCEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH RRDLVVAMLNEAPGITCSKPEGAFYVFPSIAGCLGKTSAGGTKIVDDEAFVTALLEEQGV HHHEEEEEECCCCCCEECCCCCCEEECCHHHHHHCCCCCCCCEEECCHHHHHHHHHHCCC AAVHGSAFIYPGYFRVSYATSTEALRDACTRIQTFCQGLR EEECCCEEEECCEEEEEECCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNLIAARLNRISPSQTIAISTKARQLKAEGRDIISLSAGEPDFDTPDHIKRAAIAAIEAG CCCHHHHHHCCCCCCEEEEEHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHEECC ETKYTDVAGTMALRKAVAAKFKRDNGIDYTPQEIIVSTGGKQVIFNAMLATVEAGDEVII CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEEECCCHHHHHHHHHHHHCCCCEEEE PTPCWVSYPDIVQLAEGKPVFVPCSQNNGFKLRAEDLEAAITPKTKWLMLNSPSNPTGAA CCCCCCCCHHHHHHCCCCEEEEECCCCCCEEEECCCCCEEECCCEEEEEEECCCCCCCCC YSAEDLRPICDVLLRHPDIWVFTDDIYEKLVYDGFAPATIVGVEPKLRERTVTMNGCSKA CCHHHHHHHHHHHHCCCCEEEECHHHHHHHHHCCCCCEEEEECCCCHHHCEEEECCCCHH YAMTGWRIGFCGAPVQLIKAMDKLQSQSTSNTSSVSQVAALAALEGPEDAIDVMRAAYRE HHCCCCEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH RRDLVVAMLNEAPGITCSKPEGAFYVFPSIAGCLGKTSAGGTKIVDDEAFVTALLEEQGV HHHEEEEEECCCCCCEECCCCCCEEECCHHHHHHCCCCCCCCEEECCHHHHHHHHHHCCC AAVHGSAFIYPGYFRVSYATSTEALRDACTRIQTFCQGLR EEECCCEEEECCEEEEEECCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2019560; 8096210; 11481430 [H]