| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is 148259665
Identifier: 148259665
GI number: 148259665
Start: 735088
End: 735807
Strand: Reverse
Name: 148259665
Synonym: Acry_0652
Alternate gene names: NA
Gene position: 735807-735088 (Counterclockwise)
Preceding gene: 148259666
Following gene: 148259664
Centisome position: 21.71
GC content: 75.97
Gene sequence:
>720_bases ATGACGCACGCCCCGGCAGGTGCTACCGCCACCGCGATGATCCGCGCCTTCAAGTCCCGCACCCAGTCGCCCGCCATCCA GGCCAGGATCGGCGCGATGGTCGGCGCCGCCCTCGGCTTCAGCCTGCGGACGACGCGCTGGCGGATCGACGCCGATACCT TCATCGACGTGCTCCGCGGCGGCGCGCCGGCGATCGTCGCCTGCTGGCACGAATGCCTGCCCTCGATGCCCGCGGCGATG CACGCCCTGCGCCGCCCGGCGGATGCGCCGACGGCCTACATGCTGGCGAGCCGCCACCGCGACGGCCAGCTCGTGGTCAA CGCGCTGCGCCGCTTCGGGCTCGAGGCGATCTCGGCCTCCTCGTCGCGCGGCGGCGCGGCGGGGCTGCTGGAACTCGCCC GGCTGGTGCGCGCCGGGCATCCGGTCGTGATCACGCCGGACGGCCCGCGCGGCCCGCGGCGGCGGGCGGCGGCGGGTGTC GCCCAGCTCGCGGCGCTGACCGGCGCGCCGGTCTTCTGCGCCGGTGCGGCCACCAGCCACGCCTTCCGGCTCGACAGCTG GGATTCGATGCGCCTGCCTTTGCCCTTCGGCCGCGGCGCGCTGGTCGCCTCGGCGCCGATCGCCGTCTCCCGGGACGACT GGGCAACCGCGCTGCCGCAGATCGAGGCCGAGATGAGCCGCACGCTGGACGAGGCGCTCGCGCGATGCCGGCAGGCCTGA
Upstream 100 bases:
>100_bases TGGCCTGGCGGGCATCGGACCCTCGCGAGGCGGCCTTCCGCGATCTCGCCGGCCAGCTTGCCGCGAACCGGCCGCCCTGC ACCCATGCCCCGGCACAAGG
Downstream 100 bases:
>100_bases CCGCCTATCGCCTCGCCACCGCCGGCATCGCCCCGCTGCTGCCGTTCTGGCTGGCGCGGCGGGCGCGGCGCGGCAAGGAA ATCGCCGCCCGCCTGCCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 239; Mature: 238
Protein sequence:
>239_residues MTHAPAGATATAMIRAFKSRTQSPAIQARIGAMVGAALGFSLRTTRWRIDADTFIDVLRGGAPAIVACWHECLPSMPAAM HALRRPADAPTAYMLASRHRDGQLVVNALRRFGLEAISASSSRGGAAGLLELARLVRAGHPVVITPDGPRGPRRRAAAGV AQLAALTGAPVFCAGAATSHAFRLDSWDSMRLPLPFGRGALVASAPIAVSRDDWATALPQIEAEMSRTLDEALARCRQA
Sequences:
>Translated_239_residues MTHAPAGATATAMIRAFKSRTQSPAIQARIGAMVGAALGFSLRTTRWRIDADTFIDVLRGGAPAIVACWHECLPSMPAAM HALRRPADAPTAYMLASRHRDGQLVVNALRRFGLEAISASSSRGGAAGLLELARLVRAGHPVVITPDGPRGPRRRAAAGV AQLAALTGAPVFCAGAATSHAFRLDSWDSMRLPLPFGRGALVASAPIAVSRDDWATALPQIEAEMSRTLDEALARCRQA >Mature_238_residues THAPAGATATAMIRAFKSRTQSPAIQARIGAMVGAALGFSLRTTRWRIDADTFIDVLRGGAPAIVACWHECLPSMPAAMH ALRRPADAPTAYMLASRHRDGQLVVNALRRFGLEAISASSSRGGAAGLLELARLVRAGHPVVITPDGPRGPRRRAAAGVA QLAALTGAPVFCAGAATSHAFRLDSWDSMRLPLPFGRGALVASAPIAVSRDDWATALPQIEAEMSRTLDEALARCRQA
Specific function: Unknown
COG id: COG2121
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To H.pylori HP0270 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007172 - ProDom: PD032436 [H]
Pfam domain/function: PF04028 DUF374 [H]
EC number: NA
Molecular weight: Translated: 25133; Mature: 25002
Theoretical pI: Translated: 11.76; Mature: 11.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHAPAGATATAMIRAFKSRTQSPAIQARIGAMVGAALGFSLRTTRWRIDADTFIDVLRG CCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEECEEEEECHHHHHHHHHC GAPAIVACWHECLPSMPAAMHALRRPADAPTAYMLASRHRDGQLVVNALRRFGLEAISAS CCCHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHCHHHHHCC SSRGGAAGLLELARLVRAGHPVVITPDGPRGPRRRAAAGVAQLAALTGAPVFCAGAATSH CCCCCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCC AFRLDSWDSMRLPLPFGRGALVASAPIAVSRDDWATALPQIEAEMSRTLDEALARCRQA EEECCCCCCCCCCCCCCCCCEEECCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure THAPAGATATAMIRAFKSRTQSPAIQARIGAMVGAALGFSLRTTRWRIDADTFIDVLRG CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEECEEEEECHHHHHHHHHC GAPAIVACWHECLPSMPAAMHALRRPADAPTAYMLASRHRDGQLVVNALRRFGLEAISAS CCCHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHCHHHHHCC SSRGGAAGLLELARLVRAGHPVVITPDGPRGPRRRAAAGVAQLAALTGAPVFCAGAATSH CCCCCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCC AFRLDSWDSMRLPLPFGRGALVASAPIAVSRDDWATALPQIEAEMSRTLDEALARCRQA EEECCCCCCCCCCCCCCCCCEEECCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]