| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is waaA [H]
Identifier: 148259664
GI number: 148259664
Start: 733865
End: 735103
Strand: Reverse
Name: waaA [H]
Synonym: Acry_0651
Alternate gene names: 148259664
Gene position: 735103-733865 (Counterclockwise)
Preceding gene: 148259665
Following gene: 148259663
Centisome position: 21.69
GC content: 76.27
Gene sequence:
>1239_bases ATGCCGGCAGGCCTGACCGCCTATCGCCTCGCCACCGCCGGCATCGCCCCGCTGCTGCCGTTCTGGCTGGCGCGGCGGGC GCGGCGCGGCAAGGAAATCGCCGCCCGCCTGCCGGAGCGCTACGGCATCGCCGGGCTGGCGCGGCCGCCGGGCCGGCTCG TCTGGGTCCATGCCGCCAGCATGGGCGAGACGATGTCCGCCCTCGGCATGATCGACGCCCTGGCCGACCGCGCAACCGTG CTGCTGACCACCGGCACCCGCACCGCCGCCGCCCTTGCCGAATCGCGGGCGCGGGCGCTGCACCAGTTCGTCCCGCTCGA CGTCGCCGCCCATGCCACGCGCTTCCTCGACCATTGGCGGCCGGACGCGGCGGTGTTCCTCGAATCCGAGATCTGGCCGA ACCTGCTCGCCGGGCTCGACGCGCGGCGCATCCCCCGCTTCCTGTTCAACGCCCGCCTCTCCGCCCGCAGCGCCGCGCGC TGGCGCCGCGCCCCCACCCTCGCCCGCGCCCTGTTCGGCGGGTTCCGGCTGATCGCCGCGCAATCGGCGCCGGATGCCGC TTCGCTGCGCGGCCTCGGCCTCACCCGCGTCGAGACCTGGGGCAACCTGAAATTCGCCGCCCCCGACCTGCCGGACGATC CCGCCGCCCGCGCCGCACTCGCCGCCGCCGCAGCCGGCCCGTTCATCCTCGCCGCCAGCACCCATCCGGGCGAGGATGCG CCGGTGATCGCCGCGCATCGCATTCTGCGCGAAACCCGGCCCGGCCTCGTCACCATCATCGCGCCGCGCCATCCCGAACG CGCCGACGCCATCGCCGGTCTCGCCGGCGATCTGCCCGTTTCCCGGCGCTCGCGCGGCGAGGCGCCCGCCGCCGGCGGGC TCTACATCGCCGACACGCTGGGCGAACTCGGCCTGTTCTACCGTCTCGCCGCCGTTTCCTTCATCGGCGGCTCGCTGGTC CCCATCGGCGGCCACAACATGATCGAGGCGGCGCAGCTCGGCTGCCCCGTGCTCACCGGCCCGCATCTGGCGAATTTCGC CGAGGCCGCGGCAACGCTGCGCACGGCCGGCGCCCTTGCCGATCTCGCCGGGCCGGACGACCTCGCCCCCGCCGTCGCCG CCCTGCTCGACGATCCCGCCCGCCGCGCCGCGATGGCCGCATCCGGCCGCGCCGCCTGCGCCGGGCTCGCCGGCCTGCCC GCCCGGCTGGCCCGCACCGTTCTCGACGAGGCTCCCTGA
Upstream 100 bases:
>100_bases TCGCCTCGGCGCCGATCGCCGTCTCCCGGGACGACTGGGCAACCGCGCTGCCGCAGATCGAGGCCGAGATGAGCCGCACG CTGGACGAGGCGCTCGCGCG
Downstream 100 bases:
>100_bases TGCGCGCCCCCGCCTTCTGGACCACCGACGCCTTCCCGGCGCCGCTCCTCGCCCCGCTCGGCGCGATCACGCGCGCGCTG ACCGCCCGGCGCGTCGCCCG
Product: 3-deoxy-D-manno-octulosonic-acid transferase domain-containing protein
Products: NA
Alternate protein names: KDO transferase [H]
Number of amino acids: Translated: 412; Mature: 411
Protein sequence:
>412_residues MPAGLTAYRLATAGIAPLLPFWLARRARRGKEIAARLPERYGIAGLARPPGRLVWVHAASMGETMSALGMIDALADRATV LLTTGTRTAAALAESRARALHQFVPLDVAAHATRFLDHWRPDAAVFLESEIWPNLLAGLDARRIPRFLFNARLSARSAAR WRRAPTLARALFGGFRLIAAQSAPDAASLRGLGLTRVETWGNLKFAAPDLPDDPAARAALAAAAAGPFILAASTHPGEDA PVIAAHRILRETRPGLVTIIAPRHPERADAIAGLAGDLPVSRRSRGEAPAAGGLYIADTLGELGLFYRLAAVSFIGGSLV PIGGHNMIEAAQLGCPVLTGPHLANFAEAAATLRTAGALADLAGPDDLAPAVAALLDDPARRAAMAASGRAACAGLAGLP ARLARTVLDEAP
Sequences:
>Translated_412_residues MPAGLTAYRLATAGIAPLLPFWLARRARRGKEIAARLPERYGIAGLARPPGRLVWVHAASMGETMSALGMIDALADRATV LLTTGTRTAAALAESRARALHQFVPLDVAAHATRFLDHWRPDAAVFLESEIWPNLLAGLDARRIPRFLFNARLSARSAAR WRRAPTLARALFGGFRLIAAQSAPDAASLRGLGLTRVETWGNLKFAAPDLPDDPAARAALAAAAAGPFILAASTHPGEDA PVIAAHRILRETRPGLVTIIAPRHPERADAIAGLAGDLPVSRRSRGEAPAAGGLYIADTLGELGLFYRLAAVSFIGGSLV PIGGHNMIEAAQLGCPVLTGPHLANFAEAAATLRTAGALADLAGPDDLAPAVAALLDDPARRAAMAASGRAACAGLAGLP ARLARTVLDEAP >Mature_411_residues PAGLTAYRLATAGIAPLLPFWLARRARRGKEIAARLPERYGIAGLARPPGRLVWVHAASMGETMSALGMIDALADRATVL LTTGTRTAAALAESRARALHQFVPLDVAAHATRFLDHWRPDAAVFLESEIWPNLLAGLDARRIPRFLFNARLSARSAARW RRAPTLARALFGGFRLIAAQSAPDAASLRGLGLTRVETWGNLKFAAPDLPDDPAARAALAAAAAGPFILAASTHPGEDAP VIAAHRILRETRPGLVTIIAPRHPERADAIAGLAGDLPVSRRSRGEAPAAGGLYIADTLGELGLFYRLAAVSFIGGSLVP IGGHNMIEAAQLGCPVLTGPHLANFAEAAATLRTAGALADLAGPDDLAPAVAALLDDPARRAAMAASGRAACAGLAGLPA RLARTVLDEAP
Specific function: Essential step in lipopolysaccharides biosynthesis. Acts at transfer of 3-deoxy-D-mono octulonic acid (KDO) from CMP-KDO to a tetraacyldisaccharide 1,4'-bisphosphate precursor of lipid A (lipid IVA) [H]
COG id: COG1519
COG function: function code M; 3-deoxy-D-manno-octulosonic-acid transferase
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
Organism=Escherichia coli, GI1790064, Length=381, Percent_Identity=38.3202099737533, Blast_Score=209, Evalue=4e-55,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007507 [H]
Pfam domain/function: PF04413 Glycos_transf_N [H]
EC number: 2.-.-.-
Molecular weight: Translated: 42859; Mature: 42728
Theoretical pI: Translated: 11.17; Mature: 11.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAGLTAYRLATAGIAPLLPFWLARRARRGKEIAARLPERYGIAGLARPPGRLVWVHAAS CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHCCCCCCCCCCCEEEEEECC MGETMSALGMIDALADRATVLLTTGTRTAAALAESRARALHQFVPLDVAAHATRFLDHWR HHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC PDAAVFLESEIWPNLLAGLDARRIPRFLFNARLSARSAARWRRAPTLARALFGGFRLIAA CCCEEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEE QSAPDAASLRGLGLTRVETWGNLKFAAPDLPDDPAARAALAAAAAGPFILAASTHPGEDA CCCCCHHHHCCCCCEEEECCCCEEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCC PVIAAHRILRETRPGLVTIIAPRHPERADAIAGLAGDLPVSRRSRGEAPAAGGLYIADTL CHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCEEHHHHH GELGLFYRLAAVSFIGGSLVPIGGHNMIEAAQLGCPVLTGPHLANFAEAAATLRTAGALA HHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH DLAGPDDLAPAVAALLDDPARRAAMAASGRAACAGLAGLPARLARTVLDEAP HCCCCHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHCCC >Mature Secondary Structure PAGLTAYRLATAGIAPLLPFWLARRARRGKEIAARLPERYGIAGLARPPGRLVWVHAAS CCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHCCCCCCCCCCCEEEEEECC MGETMSALGMIDALADRATVLLTTGTRTAAALAESRARALHQFVPLDVAAHATRFLDHWR HHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC PDAAVFLESEIWPNLLAGLDARRIPRFLFNARLSARSAARWRRAPTLARALFGGFRLIAA CCCEEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEE QSAPDAASLRGLGLTRVETWGNLKFAAPDLPDDPAARAALAAAAAGPFILAASTHPGEDA CCCCCHHHHCCCCCEEEECCCCEEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCC PVIAAHRILRETRPGLVTIIAPRHPERADAIAGLAGDLPVSRRSRGEAPAAGGLYIADTL CHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCEEHHHHH GELGLFYRLAAVSFIGGSLVPIGGHNMIEAAQLGCPVLTGPHLANFAEAAATLRTAGALA HHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH DLAGPDDLAPAVAALLDDPARRAAMAASGRAACAGLAGLPARLARTVLDEAP HCCCCHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferring phosphorus-containing groups [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA