Definition Acidiphilium cryptum JF-5 chromosome, complete genome.
Accession NC_009484
Length 3,389,227

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The map label for this gene is 148259654

Identifier: 148259654

GI number: 148259654

Start: 723209

End: 724993

Strand: Reverse

Name: 148259654

Synonym: Acry_0641

Alternate gene names: NA

Gene position: 724993-723209 (Counterclockwise)

Preceding gene: 148259655

Following gene: 148259653

Centisome position: 21.39

GC content: 71.43

Gene sequence:

>1785_bases
ATGGCGGACCACCCGACGACAGAGTTCTTCCGGCCGGACACCACCCCGTCCGCCGACTGGGGCGCGGCCGGCAACTGGAG
CGGCGGCACCGTTCCCTCCGCCGGCGTCACCGCCGAGATCGTCGGGCTCTTCGCCTCGATCGACCCGACCATGACGATCG
AGACCGCCATCCGCCTGGAGGGTGGCGCGGACGCGGCCGGGCTGGTCGGCAACGGCGGCGCGGTTGCCCTGGGGCGAAAC
TCCTGGCTCGACGTCGCCGCCGCCGCCGACCTGTTCGCCTATGATTCCGCCGTCGGCATGGGGACCATCTCGCTCGCCTG
CGACGCGACGCTCAATGTCGTGGTCGATCTCGGCGCCCTGACCGGGTTGCCCGGCGCGGCCCCGCCCAGCTTCGGCAATG
ACGGCACGATCGATATCGGCGCCGGCGCGCTGGTCGAGATCGGCGGCACGGCATTCGACAATCGGGGCACCGTCGATATT
GCCGCGGGCACGCTCGCCGTCGAGGGCGGCGCCGTGCAAGGCGGCGGGCTGATCGCCCTGAGCGGCGGCGCCTCCGCCCT
GCTGGCCGACGGCGTCGCCGGCCAGACCTTCCTGTTCGGCCCCGGCGGCGGGACGCTGACGCTCGAAGATCCCTATCTCG
GCCGTGGCGTCACGATCGCCGACCTCGCGCCCGGCGACACGATCGTCCTGCCGACGCTGCGCAACGGCGAGGTCCGCGAG
ACCGGCGATGCCGTGAGCCTCATCGACGCCGCCGGCCATGTCGACGGGCAGTTCGTGCTCCGGGACGCGGCCGGCTTCCA
TGTCGAGACCGGCTCCGGCGGAACGACGATCAGCGGCGGCGCCTACGATCCCCCCTGTTTCGCGCGCGGCACCCTTATCC
TGACCCGCGAAGGGCTTCGCCCGGTCGAAACCCTCGCCGCCGGCGACGAGGTCGTCACGGCCGACGGAAAGCTCGTGCCC
GTCATCTGGACCGGTTCGCGCACGCTCGATCTCGCGATGCACCCGGCGCCCGAGAAGGTGAAACCCGTCTGCTTCGCGCC
CGGATCGATGGCCGACGGCGTCCCCGCCCGCCGCCTGCGGCTTTCGCCCGATCACGCGGTCTGGTTCGACAACCTCCTGA
TTCCCGCCAAGTTCCTCGTCAACGGCGCGACCATCACGCAGGACGAGGCCTGCCTCGCCATCACCTACTACCATGTCGAG
CTGGCCCGGCACGACGTGATCCTGGCCGAGGGCGCGCCATGCGAGAGCTACCTCGACACCGGCAACCGCGCCGGCTTCAC
CACGGCGCAGGCCTGGCCGGTCCGCGATCTCCGCTGGGACCGGGATGCCTGCGCGCCGCTCTGCACCGGCGGGCCGGCGC
TCCTCGCGGTGCGGCAGCAGCTGCATCATCGCGCGCTGTCCGAAGGCTTCCGGGTCGGCACCGTCCGGGACGCCGCGCTG
TGGACAGGAGGCGTGATCCTGCCCGTCGAAACCGCAGACTGGCTGTCCCTCCCTTCCGGGCATGACGGCAGGGCCATTCT
CCGGTCATCGTGTTTCGTGCCGGCCTGCGTCGATCCCGCGTCCGATGACCGGCGCACCCTCGGCGTCGCCCTCGCCGCGC
TGCAGACCGACCTCGGCGAGATTCAGCTCGACAACTGTGCCGTCCAGGGTTTCCACAATCGTGCGTCAGGCGACGCGGCA
AGATGGACCAATGGCCGTGGCGAAATCATGCTGCCACGCCAGGCTCGGCGCATCCGTGTCTGCCTCGAAGCCTTCCCGCG
CCTCTGGCAGCGGGCCGGCGGATAG

Upstream 100 bases:

>100_bases
AACAGTTCTGCTAACGCGCCTTTAAATTCGGGCGTAAAAACCACGCCTCCTTGGCGGCCGCCGGCTCATGATGACCGGGC
CGGGCCGTTGGAGATGCGCG

Downstream 100 bases:

>100_bases
CATAGGAATCGTCGCAGCCGGTGAGATGTTCAATCTTTAATGTAATATTAACTTTTTCGGAGACCGCCTCGTCCAAATTT
CAGCTTCGCAACCTGCTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: Outer Membrane Protein; Hemagglutinin-Related Protein; Type I Secretion Target Repeat-Containing Protein; Triple Helix Repeat-Containing Collagen; Adhesin Family Protein; Peptidase Metallopeptidase; Collagen Triple Helix Repeat-Containing Protein; Collagen Triple Helix Repeat; Peroxidase; Bifunctional Hemolysin/Adenylate Cyclase

Number of amino acids: Translated: 594; Mature: 593

Protein sequence:

>594_residues
MADHPTTEFFRPDTTPSADWGAAGNWSGGTVPSAGVTAEIVGLFASIDPTMTIETAIRLEGGADAAGLVGNGGAVALGRN
SWLDVAAAADLFAYDSAVGMGTISLACDATLNVVVDLGALTGLPGAAPPSFGNDGTIDIGAGALVEIGGTAFDNRGTVDI
AAGTLAVEGGAVQGGGLIALSGGASALLADGVAGQTFLFGPGGGTLTLEDPYLGRGVTIADLAPGDTIVLPTLRNGEVRE
TGDAVSLIDAAGHVDGQFVLRDAAGFHVETGSGGTTISGGAYDPPCFARGTLILTREGLRPVETLAAGDEVVTADGKLVP
VIWTGSRTLDLAMHPAPEKVKPVCFAPGSMADGVPARRLRLSPDHAVWFDNLLIPAKFLVNGATITQDEACLAITYYHVE
LARHDVILAEGAPCESYLDTGNRAGFTTAQAWPVRDLRWDRDACAPLCTGGPALLAVRQQLHHRALSEGFRVGTVRDAAL
WTGGVILPVETADWLSLPSGHDGRAILRSSCFVPACVDPASDDRRTLGVALAALQTDLGEIQLDNCAVQGFHNRASGDAA
RWTNGRGEIMLPRQARRIRVCLEAFPRLWQRAGG

Sequences:

>Translated_594_residues
MADHPTTEFFRPDTTPSADWGAAGNWSGGTVPSAGVTAEIVGLFASIDPTMTIETAIRLEGGADAAGLVGNGGAVALGRN
SWLDVAAAADLFAYDSAVGMGTISLACDATLNVVVDLGALTGLPGAAPPSFGNDGTIDIGAGALVEIGGTAFDNRGTVDI
AAGTLAVEGGAVQGGGLIALSGGASALLADGVAGQTFLFGPGGGTLTLEDPYLGRGVTIADLAPGDTIVLPTLRNGEVRE
TGDAVSLIDAAGHVDGQFVLRDAAGFHVETGSGGTTISGGAYDPPCFARGTLILTREGLRPVETLAAGDEVVTADGKLVP
VIWTGSRTLDLAMHPAPEKVKPVCFAPGSMADGVPARRLRLSPDHAVWFDNLLIPAKFLVNGATITQDEACLAITYYHVE
LARHDVILAEGAPCESYLDTGNRAGFTTAQAWPVRDLRWDRDACAPLCTGGPALLAVRQQLHHRALSEGFRVGTVRDAAL
WTGGVILPVETADWLSLPSGHDGRAILRSSCFVPACVDPASDDRRTLGVALAALQTDLGEIQLDNCAVQGFHNRASGDAA
RWTNGRGEIMLPRQARRIRVCLEAFPRLWQRAGG
>Mature_593_residues
ADHPTTEFFRPDTTPSADWGAAGNWSGGTVPSAGVTAEIVGLFASIDPTMTIETAIRLEGGADAAGLVGNGGAVALGRNS
WLDVAAAADLFAYDSAVGMGTISLACDATLNVVVDLGALTGLPGAAPPSFGNDGTIDIGAGALVEIGGTAFDNRGTVDIA
AGTLAVEGGAVQGGGLIALSGGASALLADGVAGQTFLFGPGGGTLTLEDPYLGRGVTIADLAPGDTIVLPTLRNGEVRET
GDAVSLIDAAGHVDGQFVLRDAAGFHVETGSGGTTISGGAYDPPCFARGTLILTREGLRPVETLAAGDEVVTADGKLVPV
IWTGSRTLDLAMHPAPEKVKPVCFAPGSMADGVPARRLRLSPDHAVWFDNLLIPAKFLVNGATITQDEACLAITYYHVEL
ARHDVILAEGAPCESYLDTGNRAGFTTAQAWPVRDLRWDRDACAPLCTGGPALLAVRQQLHHRALSEGFRVGTVRDAALW
TGGVILPVETADWLSLPSGHDGRAILRSSCFVPACVDPASDDRRTLGVALAALQTDLGEIQLDNCAVQGFHNRASGDAAR
WTNGRGEIMLPRQARRIRVCLEAFPRLWQRAGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61205; Mature: 61073

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADHPTTEFFRPDTTPSADWGAAGNWSGGTVPSAGVTAEIVGLFASIDPTMTIETAIRLE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEEEC
GGADAAGLVGNGGAVALGRNSWLDVAAAADLFAYDSAVGMGTISLACDATLNVVVDLGAL
CCCCCCCEECCCCEEEECCCCCEEHHHHHHHHHHCCCCCCCEEEEEECCEEEEEEEEHHH
TGLPGAAPPSFGNDGTIDIGAGALVEIGGTAFDNRGTVDIAAGTLAVEGGAVQGGGLIAL
CCCCCCCCCCCCCCCEEEECCCEEEEECCEEECCCCEEEEEECEEEECCCEECCCCEEEE
SGGASALLADGVAGQTFLFGPGGGTLTLEDPYLGRGVTIADLAPGDTIVLPTLRNGEVRE
CCCCCEEEECCCCCCEEEEECCCCEEEECCCCCCCCEEEEECCCCCEEEEEECCCCCCCC
TGDAVSLIDAAGHVDGQFVLRDAAGFHVETGSGGTTISGGAYDPPCFARGTLILTREGLR
CCCEEEEEHHCCCCCCEEEEEECCCEEEEECCCCCEECCCCCCCCCHHCCEEEEEECCCC
PVETLAAGDEVVTADGKLVPVIWTGSRTLDLAMHPAPEKVKPVCFAPGSMADGVPARRLR
HHHHHHCCCEEEECCCCEEEEEEECCEEEEEEECCCCCCCCCEEECCCCCCCCCCCCEEE
LSPDHAVWFDNLLIPAKFLVNGATITQDEACLAITYYHVELARHDVILAEGAPCESYLDT
ECCCCEEEECCEEECHHHEECCCEEECCCCEEEEEEEEEEEECCEEEEECCCCHHHHHCC
GNRAGFTTAQAWPVRDLRWDRDACAPLCTGGPALLAVRQQLHHRALSEGFRVGTVRDAAL
CCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEHHHE
WTGGVILPVETADWLSLPSGHDGRAILRSSCFVPACVDPASDDRRTLGVALAALQTDLGE
ECCCEEEEECCHHHHCCCCCCCCHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHCCCCC
IQLDNCAVQGFHNRASGDAARWTNGRGEIMLPRQARRIRVCLEAFPRLWQRAGG
EEECCEEEECCCCCCCCCCCEECCCCCCEEECCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ADHPTTEFFRPDTTPSADWGAAGNWSGGTVPSAGVTAEIVGLFASIDPTMTIETAIRLE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEEEC
GGADAAGLVGNGGAVALGRNSWLDVAAAADLFAYDSAVGMGTISLACDATLNVVVDLGAL
CCCCCCCEECCCCEEEECCCCCEEHHHHHHHHHHCCCCCCCEEEEEECCEEEEEEEEHHH
TGLPGAAPPSFGNDGTIDIGAGALVEIGGTAFDNRGTVDIAAGTLAVEGGAVQGGGLIAL
CCCCCCCCCCCCCCCEEEECCCEEEEECCEEECCCCEEEEEECEEEECCCEECCCCEEEE
SGGASALLADGVAGQTFLFGPGGGTLTLEDPYLGRGVTIADLAPGDTIVLPTLRNGEVRE
CCCCCEEEECCCCCCEEEEECCCCEEEECCCCCCCCEEEEECCCCCEEEEEECCCCCCCC
TGDAVSLIDAAGHVDGQFVLRDAAGFHVETGSGGTTISGGAYDPPCFARGTLILTREGLR
CCCEEEEEHHCCCCCCEEEEEECCCEEEEECCCCCEECCCCCCCCCHHCCEEEEEECCCC
PVETLAAGDEVVTADGKLVPVIWTGSRTLDLAMHPAPEKVKPVCFAPGSMADGVPARRLR
HHHHHHCCCEEEECCCCEEEEEEECCEEEEEEECCCCCCCCCEEECCCCCCCCCCCCEEE
LSPDHAVWFDNLLIPAKFLVNGATITQDEACLAITYYHVELARHDVILAEGAPCESYLDT
ECCCCEEEECCEEECHHHEECCCEEECCCCEEEEEEEEEEEECCEEEEECCCCHHHHHCC
GNRAGFTTAQAWPVRDLRWDRDACAPLCTGGPALLAVRQQLHHRALSEGFRVGTVRDAAL
CCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEHHHE
WTGGVILPVETADWLSLPSGHDGRAILRSSCFVPACVDPASDDRRTLGVALAALQTDLGE
ECCCEEEEECCHHHHCCCCCCCCHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHCCCCC
IQLDNCAVQGFHNRASGDAARWTNGRGEIMLPRQARRIRVCLEAFPRLWQRAGG
EEECCEEEECCCCCCCCCCCEECCCCCCEEECCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA