| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is 148259596
Identifier: 148259596
GI number: 148259596
Start: 652232
End: 653053
Strand: Reverse
Name: 148259596
Synonym: Acry_0580
Alternate gene names: NA
Gene position: 653053-652232 (Counterclockwise)
Preceding gene: 148259599
Following gene: 148259594
Centisome position: 19.27
GC content: 73.11
Gene sequence:
>822_bases ATGAAGGCGCGTGGTGGCGTAACCCTGCTGTGTCTCGTGGTGCTGCTGGCCGGCTGCGCGCGGCCGCCGGTGCGGGCCGC CATTCGCCCGCCGGCGCCGGAACGCGCGGCGGATGCGGCGTTTCGCGCCGAGGTCGCGGCGGCAGCGGCGGAACTGGCCC GGGAGGTGCCGCGGGCGAGCGTGCCCGCGCCCGCGGCCGCGGCGCAATGGATCGCGGCGGCACGGCGCGGGCTGGCGGCG GCCGGGGTGGGTGTGACCCGGAGCCAGCTCATCGTCGTCGTCGATCGCAATCCGCGGGTCCAGCGTCTCTGCATCGTCGC GGCGCGGCCCGCCGGGGCGTGGGACGTGGTCGGGTGCGACGCCGTTTCAACCGGGCAGGCCGGGCGGCGGGGATACTTCA TCACCCCGGTCGGCGTGTTTGCCCATACGACGGGCATTCTCGACTACCGGGCGCTCGGCACGTTCAACGAGAACCATATC CGCGGCCTGGGCCTGAAGGGGATGCGGGTGTGGGATTTCGGCTGGCGGGTCGCGGAAAAGGGCTGGCGGAGCGATGGCGA GACCGGCGAGATCCGGCTGCTGGTGCATGCAACCGACCCGGATTACCTGGAACCGCGCCTCGGCCAGACGGCCTCGCAGG GATGCGTGCGGATATCGGCGGCGATGAACCGGTTCCTCGATCGCCACGGCGTGCTCGACGCCGAACAGGAGGCGGCTTCC CGGGACGATGCGCGGATCGCGGCGACGCTGCCGGCCGACCGCGCCCCCTCGCCGCTCGCGGGCGAATTGCTGGTGGTGAT CGATTCGACGGAGGGAGCCTGA
Upstream 100 bases:
>100_bases CGCCCCGGCGGGGGCCGTCAAACCGGGCGGCTGCGCTGGATCAATGACCGATCGCCCCGGCGGGTCTATCGCAGCCGGAG CGGAACGGCGGAGGAGCCGG
Downstream 100 bases:
>100_bases CATGCCGTGGAACGCGGAGGAGGCCGAACGCCATACGCACCGGGCGAACACGCCCGAATTGCGGGAACTCTGGGCGAAGA TCGCCAATGAGTGCCTCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MKARGGVTLLCLVVLLAGCARPPVRAAIRPPAPERAADAAFRAEVAAAAAELAREVPRASVPAPAAAAQWIAAARRGLAA AGVGVTRSQLIVVVDRNPRVQRLCIVAARPAGAWDVVGCDAVSTGQAGRRGYFITPVGVFAHTTGILDYRALGTFNENHI RGLGLKGMRVWDFGWRVAEKGWRSDGETGEIRLLVHATDPDYLEPRLGQTASQGCVRISAAMNRFLDRHGVLDAEQEAAS RDDARIAATLPADRAPSPLAGELLVVIDSTEGA
Sequences:
>Translated_273_residues MKARGGVTLLCLVVLLAGCARPPVRAAIRPPAPERAADAAFRAEVAAAAAELAREVPRASVPAPAAAAQWIAAARRGLAA AGVGVTRSQLIVVVDRNPRVQRLCIVAARPAGAWDVVGCDAVSTGQAGRRGYFITPVGVFAHTTGILDYRALGTFNENHI RGLGLKGMRVWDFGWRVAEKGWRSDGETGEIRLLVHATDPDYLEPRLGQTASQGCVRISAAMNRFLDRHGVLDAEQEAAS RDDARIAATLPADRAPSPLAGELLVVIDSTEGA >Mature_273_residues MKARGGVTLLCLVVLLAGCARPPVRAAIRPPAPERAADAAFRAEVAAAAAELAREVPRASVPAPAAAAQWIAAARRGLAA AGVGVTRSQLIVVVDRNPRVQRLCIVAARPAGAWDVVGCDAVSTGQAGRRGYFITPVGVFAHTTGILDYRALGTFNENHI RGLGLKGMRVWDFGWRVAEKGWRSDGETGEIRLLVHATDPDYLEPRLGQTASQGCVRISAAMNRFLDRHGVLDAEQEAAS RDDARIAATLPADRAPSPLAGELLVVIDSTEGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28763; Mature: 28763
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKARGGVTLLCLVVLLAGCARPPVRAAIRPPAPERAADAAFRAEVAAAAAELAREVPRAS CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC VPAPAAAAQWIAAARRGLAAAGVGVTRSQLIVVVDRNPRVQRLCIVAARPAGAWDVVGCD CCCCHHHHHHHHHHHHCCHHHCCCCCCCEEEEEECCCCCEEEEEEEEECCCCCEEEEECC AVSTGQAGRRGYFITPVGVFAHTTGILDYRALGTFNENHIRGLGLKGMRVWDFGWRVAEK CCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEECCHHHHHH GWRSDGETGEIRLLVHATDPDYLEPRLGQTASQGCVRISAAMNRFLDRHGVLDAEQEAAS CCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCC RDDARIAATLPADRAPSPLAGELLVVIDSTEGA CCCCEEEEECCCCCCCCCCCCEEEEEEECCCCC >Mature Secondary Structure MKARGGVTLLCLVVLLAGCARPPVRAAIRPPAPERAADAAFRAEVAAAAAELAREVPRAS CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC VPAPAAAAQWIAAARRGLAAAGVGVTRSQLIVVVDRNPRVQRLCIVAARPAGAWDVVGCD CCCCHHHHHHHHHHHHCCHHHCCCCCCCEEEEEECCCCCEEEEEEEEECCCCCEEEEECC AVSTGQAGRRGYFITPVGVFAHTTGILDYRALGTFNENHIRGLGLKGMRVWDFGWRVAEK CCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEECCHHHHHH GWRSDGETGEIRLLVHATDPDYLEPRLGQTASQGCVRISAAMNRFLDRHGVLDAEQEAAS CCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCC RDDARIAATLPADRAPSPLAGELLVVIDSTEGA CCCCEEEEECCCCCCCCCCCCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA