| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is zraS [C]
Identifier: 148259594
GI number: 148259594
Start: 649401
End: 651299
Strand: Reverse
Name: zraS [C]
Synonym: Acry_0578
Alternate gene names: 148259594
Gene position: 651299-649401 (Counterclockwise)
Preceding gene: 148259596
Following gene: 148259592
Centisome position: 19.22
GC content: 69.62
Gene sequence:
>1899_bases ATGACTCCGGAGCCCGAAGCCCCCGACGCGCCGCTGGCCTTCGCCCGATCCTTCGAGGCCGCGCTGATCGGCAAGTCGCT CGACGGCATCATCACGTCGTGGAGCGAAGGCGCCGAGAATCTGTTCGGCTATCGCGCGGACGAAATCATCGGGCGCTCGA TCCATGTGCTGGCGCCGCCCGGGCGCGAGGCGGAAATGGACGAGCTGCTGGCCCGGACGGCAAGGGGCGAGACCTTCGAC CAGTTCGAGACCATCCGCCGGCGCAAGGACGGCACGCTCGTCCGCGTGCTGCTCACGCTCAACCCGGTGCACGATACGGA AGGCTGCATCGTCGGCATTTCCAAGATCGCGCGGGATATCACCGAGCATCGCAGCACCGAGGCCAGGCTCCGCTCGATCC TCGACACCGCGCCGGATGCCATCGTCGTGATCGATCCGCGCGGCACCGTGAGGTCGTTCAGCCAGGCGGCGGAGCGGATG TTCGGCTACGCCGCCGAGGAGGTCGTCGGCCGCAACGTGTCGATGCTGATGGCCGAGCCCCATGCCGCCGCGCATGACGG CTATCTCGCCCGTTACCTCGAAACCGGCGAACGGCGCATCATCGGCATCGGCCGCGAGGTGGAGGCCCGCCGGGCCGATG GCTCGACCTTCCCGATCGAACTCGCCGTCGGCGAGGTCGACCTGCCGGAGACGAGGCTGTTCACCGGCTTCATCCGCGAC GCCAGCAAGCGCAAGCGGCTCGAGAACGACCTTGCCCAGGCGCAGAAGATGGAGGCGGTGGGCCAGCTTACCGGCGGCCT CGCCCATGATTTCAACAACCTGCTGGCGGTGATTTCCGGCAATCTCGAAATGCTGGAGAGCCATGTCGCCGGCGGCGAGG CGGCGGAACTGCTCGCCGAGGCCCGGCTCGCCACCGAACGCGGCGCCGAACTGGCGGCAAGGCTGCTCGCCTTCGGCCGG CGGCAGACCCTTCGTCCGCTCGCGATCGACGTGAACGAGCTCGTCGGGAAGATGGCGCCGCTGTTCCGCCGCACGCTCGG CTCGCCGGTCATGATCGAGACCCGGCTCGCCGCCGGGCTGCCACGCACCATGGCGGATCCCGGACAGATCGAGACGGCGC TGCTCAACCTCGCCCTCAACGCGCGGGATGCCATGCCCAAGGGCGGCCGTCTCGTGATCGAGACCGGCCTGCTCCATGTC GACGCCGACTATGCGGCACAACAGGCCGAGACCCTGCCGGGCGATTATGTGGTCCTGGCGGTGACGGATAGCGGGATCGG CATGAGCGCCGAAACGCGGGGCCGCGCCTTCGAGCCGTTCTTCACCACCAAGGCGGTCGGCGAGGGATCGGGGCTGGGCC TGTCCATGGTCTACGGCTTCGTCAAGCAGAGCGGCGGCCATGTGCAGATCTATTCCGAACCGGGCCTCGGCACCACGGTT CGCCTGTTCCTGCCGGCGATCCGGGCCGAAATGCCCGCCGCCGACGACGAGGCGGCCCCCTCCCCGCCGCCGGGCCGGGC GATCGTTCTCGTGGTCGAGGACGATCCCGCGGTGCGGCGCGTTGCGGAGCGCCGGCTTGCCCGCCTCGGCTATTCCACGA TCGACGCGGCGACGGGTGCTGCCGGCATTGCGGCGCTGGAAGCCCATCCGGAGATCGCGGTGCTGTTTACCGATATCGTC CTGGCCGGCGGCATGTCGGGCCTCGATCTCGCCATCGCCGCGCGCGCGGCGCGACCCGAGCTTCCGGTGCTGTTCACCTC CGGCTATGGCGATCCCATCGTGCTGAAGGGCCGCGCCCTGCCCGCCGGGGCGATCTGGCTGCAGAAACCCTATGCCGAGG CCGCCCTCGCGAACGCGCTGGCCGCCCTGCTCAGGCCGGTTCGCGACGAGGGCGTCTGA
Upstream 100 bases:
>100_bases CGCGGCCGGTGGCGGCAATCCGCGGGCGGGGACGCCGCACCCGTTCGGGCCGCCGCAATTGCGCATCGACGCCAGACGCC GCAGCGGGTAAAACCCCCTC
Downstream 100 bases:
>100_bases CGCGCCGGGCGCGCTTCACCGCTCCAGCTTGCCGGCGAAGACATAGCCGGCGCCGCGCACCGTCTTGATCAGTTGCGGCT GCCCGGGGTCCTGCTCGATC
Product: PAS/PAC sensor hybrid histidine kinase
Products: NA
Alternate protein names: Blue-light-activated histidine kinase; Response regulator [H]
Number of amino acids: Translated: 632; Mature: 631
Protein sequence:
>632_residues MTPEPEAPDAPLAFARSFEAALIGKSLDGIITSWSEGAENLFGYRADEIIGRSIHVLAPPGREAEMDELLARTARGETFD QFETIRRRKDGTLVRVLLTLNPVHDTEGCIVGISKIARDITEHRSTEARLRSILDTAPDAIVVIDPRGTVRSFSQAAERM FGYAAEEVVGRNVSMLMAEPHAAAHDGYLARYLETGERRIIGIGREVEARRADGSTFPIELAVGEVDLPETRLFTGFIRD ASKRKRLENDLAQAQKMEAVGQLTGGLAHDFNNLLAVISGNLEMLESHVAGGEAAELLAEARLATERGAELAARLLAFGR RQTLRPLAIDVNELVGKMAPLFRRTLGSPVMIETRLAAGLPRTMADPGQIETALLNLALNARDAMPKGGRLVIETGLLHV DADYAAQQAETLPGDYVVLAVTDSGIGMSAETRGRAFEPFFTTKAVGEGSGLGLSMVYGFVKQSGGHVQIYSEPGLGTTV RLFLPAIRAEMPAADDEAAPSPPPGRAIVLVVEDDPAVRRVAERRLARLGYSTIDAATGAAGIAALEAHPEIAVLFTDIV LAGGMSGLDLAIAARAARPELPVLFTSGYGDPIVLKGRALPAGAIWLQKPYAEAALANALAALLRPVRDEGV
Sequences:
>Translated_632_residues MTPEPEAPDAPLAFARSFEAALIGKSLDGIITSWSEGAENLFGYRADEIIGRSIHVLAPPGREAEMDELLARTARGETFD QFETIRRRKDGTLVRVLLTLNPVHDTEGCIVGISKIARDITEHRSTEARLRSILDTAPDAIVVIDPRGTVRSFSQAAERM FGYAAEEVVGRNVSMLMAEPHAAAHDGYLARYLETGERRIIGIGREVEARRADGSTFPIELAVGEVDLPETRLFTGFIRD ASKRKRLENDLAQAQKMEAVGQLTGGLAHDFNNLLAVISGNLEMLESHVAGGEAAELLAEARLATERGAELAARLLAFGR RQTLRPLAIDVNELVGKMAPLFRRTLGSPVMIETRLAAGLPRTMADPGQIETALLNLALNARDAMPKGGRLVIETGLLHV DADYAAQQAETLPGDYVVLAVTDSGIGMSAETRGRAFEPFFTTKAVGEGSGLGLSMVYGFVKQSGGHVQIYSEPGLGTTV RLFLPAIRAEMPAADDEAAPSPPPGRAIVLVVEDDPAVRRVAERRLARLGYSTIDAATGAAGIAALEAHPEIAVLFTDIV LAGGMSGLDLAIAARAARPELPVLFTSGYGDPIVLKGRALPAGAIWLQKPYAEAALANALAALLRPVRDEGV >Mature_631_residues TPEPEAPDAPLAFARSFEAALIGKSLDGIITSWSEGAENLFGYRADEIIGRSIHVLAPPGREAEMDELLARTARGETFDQ FETIRRRKDGTLVRVLLTLNPVHDTEGCIVGISKIARDITEHRSTEARLRSILDTAPDAIVVIDPRGTVRSFSQAAERMF GYAAEEVVGRNVSMLMAEPHAAAHDGYLARYLETGERRIIGIGREVEARRADGSTFPIELAVGEVDLPETRLFTGFIRDA SKRKRLENDLAQAQKMEAVGQLTGGLAHDFNNLLAVISGNLEMLESHVAGGEAAELLAEARLATERGAELAARLLAFGRR QTLRPLAIDVNELVGKMAPLFRRTLGSPVMIETRLAAGLPRTMADPGQIETALLNLALNARDAMPKGGRLVIETGLLHVD ADYAAQQAETLPGDYVVLAVTDSGIGMSAETRGRAFEPFFTTKAVGEGSGLGLSMVYGFVKQSGGHVQIYSEPGLGTTVR LFLPAIRAEMPAADDEAAPSPPPGRAIVLVVEDDPAVRRVAERRLARLGYSTIDAATGAAGIAALEAHPEIAVLFTDIVL AGGMSGLDLAIAARAARPELPVLFTSGYGDPIVLKGRALPAGAIWLQKPYAEAALANALAALLRPVRDEGV
Specific function: Photosensitive kinase and response regulator that is involved in increased bacterial virulence upon exposure to light [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=274, Percent_Identity=33.2116788321168, Blast_Score=119, Evalue=8e-28, Organism=Escherichia coli, GI1788549, Length=369, Percent_Identity=27.10027100271, Blast_Score=112, Evalue=6e-26, Organism=Escherichia coli, GI1788713, Length=485, Percent_Identity=24.3298969072165, Blast_Score=85, Evalue=2e-17, Organism=Escherichia coli, GI145693157, Length=272, Percent_Identity=25, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI87081921, Length=101, Percent_Identity=33.6633663366337, Blast_Score=66, Evalue=6e-12, Organism=Escherichia coli, GI1790300, Length=359, Percent_Identity=23.9554317548747, Blast_Score=65, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 67442; Mature: 67311
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPEPEAPDAPLAFARSFEAALIGKSLDGIITSWSEGAENLFGYRADEIIGRSIHVLAPP CCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHCCCEEEEECCC GREAEMDELLARTARGETFDQFETIRRRKDGTLVRVLLTLNPVHDTEGCIVGISKIARDI CCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCEEEHHHHHHHH TEHRSTEARLRSILDTAPDAIVVIDPRGTVRSFSQAAERMFGYAAEEVVGRNVSMLMAEP HHHCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC HAAAHDGYLARYLETGERRIIGIGREVEARRADGSTFPIELAVGEVDLPETRLFTGFIRD CCCCCCHHHHHHHHCCCCEEEEECCCCHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHH ASKRKRLENDLAQAQKMEAVGQLTGGLAHDFNNLLAVISGNLEMLESHVAGGEAAELLAE HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHH ARLATERGAELAARLLAFGRRQTLRPLAIDVNELVGKMAPLFRRTLGSPVMIETRLAAGL HHHHHHHHHHHHHHHHHHHCCCCCCHHEECHHHHHHHHHHHHHHHCCCCEEEEEHHHCCC PRTMADPGQIETALLNLALNARDAMPKGGRLVIETGLLHVDADYAAQQAETLPGDYVVLA CCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECEEEECCHHHHHHHHCCCCCEEEEE VTDSGIGMSAETRGRAFEPFFTTKAVGEGSGLGLSMVYGFVKQSGGHVQIYSEPGLGTTV EECCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCHH RLFLPAIRAEMPAADDEAAPSPPPGRAIVLVVEDDPAVRRVAERRLARLGYSTIDAATGA HHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHCCC AGIAALEAHPEIAVLFTDIVLAGGMSGLDLAIAARAARPELPVLFTSGYGDPIVLKGRAL CCEEEEECCCCEEHHHHHHHHHCCCCCCHHHHHHHCCCCCCCEEEECCCCCCEEEECCCC PAGAIWLQKPYAEAALANALAALLRPVRDEGV CCCEEEEECCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TPEPEAPDAPLAFARSFEAALIGKSLDGIITSWSEGAENLFGYRADEIIGRSIHVLAPP CCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHCCCEEEEECCC GREAEMDELLARTARGETFDQFETIRRRKDGTLVRVLLTLNPVHDTEGCIVGISKIARDI CCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCEEEHHHHHHHH TEHRSTEARLRSILDTAPDAIVVIDPRGTVRSFSQAAERMFGYAAEEVVGRNVSMLMAEP HHHCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC HAAAHDGYLARYLETGERRIIGIGREVEARRADGSTFPIELAVGEVDLPETRLFTGFIRD CCCCCCHHHHHHHHCCCCEEEEECCCCHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHH ASKRKRLENDLAQAQKMEAVGQLTGGLAHDFNNLLAVISGNLEMLESHVAGGEAAELLAE HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHH ARLATERGAELAARLLAFGRRQTLRPLAIDVNELVGKMAPLFRRTLGSPVMIETRLAAGL HHHHHHHHHHHHHHHHHHHCCCCCCHHEECHHHHHHHHHHHHHHHCCCCEEEEEHHHCCC PRTMADPGQIETALLNLALNARDAMPKGGRLVIETGLLHVDADYAAQQAETLPGDYVVLA CCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECEEEECCHHHHHHHHCCCCCEEEEE VTDSGIGMSAETRGRAFEPFFTTKAVGEGSGLGLSMVYGFVKQSGGHVQIYSEPGLGTTV EECCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCHH RLFLPAIRAEMPAADDEAAPSPPPGRAIVLVVEDDPAVRRVAERRLARLGYSTIDAATGA HHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHCCC AGIAALEAHPEIAVLFTDIVLAGGMSGLDLAIAARAARPELPVLFTSGYGDPIVLKGRAL CCEEEEECCCCEEHHHHHHHHHCCCCCCHHHHHHHCCCCCCCEEEECCCCCCEEEECCCC PAGAIWLQKPYAEAALANALAALLRPVRDEGV CCCEEEEECCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA