| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is paaI [H]
Identifier: 148259494
GI number: 148259494
Start: 531631
End: 532092
Strand: Reverse
Name: paaI [H]
Synonym: Acry_0478
Alternate gene names: 148259494
Gene position: 532092-531631 (Counterclockwise)
Preceding gene: 148259495
Following gene: 148259493
Centisome position: 15.7
GC content: 68.4
Gene sequence:
>462_bases ATGACGGAGGAACATCAGCCGCCCCCACCCGAGTCCGCGGACAACATTGCCCGCCATGTCGGCCAGGCGATGTTCGAGGT GGACCGGGCGACGCGGTCGCTCGGCATCGAGCTCGACGAGATCGGGCCCGGTTTCGCGACACTCTCGCTGCGTCTCGGCG CGGCAATGGCCAACGGGCACGGCACCGCGCATGGCGGGCTGATCTTCACCCTGGCCGATTCGGCCTTCGCCTTCGCCTGC AACTCACATGGCGAGCGGGCGGTGGCGGCGCATTGCTCGATCACCTTCCTTGCACCGGCGCGGCCGGGGGAGCGGCTCAT CGCCACCGCGCGGGAGGTGGTACGGCGCGGGCGGAACGGAATCTACGATGTTTCGGTCAGCAACGATGACGGAATCGTCG CGGCGTTCCGCGGACAGTCGCGCACGATCGGCGGCTCGTGGCTCGATGACAACGGAAGGTAG
Upstream 100 bases:
>100_bases CGCGGCTGGCGCAGCAGCGGTGGTTGCGCGATCCGGCTTTTGCGGCACACTCGGGGCAAGCGCCGTGCAACGGCGCGTCC GAGGAGGAACGCACGCCGCC
Downstream 100 bases:
>100_bases CGGGATGGAGCGGGACGTCGAATTCGCCTCGCGTGACGAGGTTGTCGCGCTGCAGACGAGGCGGCTGAGGGAGGCGCTGC GCCATGCCTATGAGCGCGTG
Product: phenylacetic acid degradation protein PaaD
Products: NA
Alternate protein names: Phenylacetic acid degradation protein PaaI [H]
Number of amino acids: Translated: 153; Mature: 152
Protein sequence:
>153_residues MTEEHQPPPPESADNIARHVGQAMFEVDRATRSLGIELDEIGPGFATLSLRLGAAMANGHGTAHGGLIFTLADSAFAFAC NSHGERAVAAHCSITFLAPARPGERLIATAREVVRRGRNGIYDVSVSNDDGIVAAFRGQSRTIGGSWLDDNGR
Sequences:
>Translated_153_residues MTEEHQPPPPESADNIARHVGQAMFEVDRATRSLGIELDEIGPGFATLSLRLGAAMANGHGTAHGGLIFTLADSAFAFAC NSHGERAVAAHCSITFLAPARPGERLIATAREVVRRGRNGIYDVSVSNDDGIVAAFRGQSRTIGGSWLDDNGR >Mature_152_residues TEEHQPPPPESADNIARHVGQAMFEVDRATRSLGIELDEIGPGFATLSLRLGAAMANGHGTAHGGLIFTLADSAFAFACN SHGERAVAAHCSITFLAPARPGERLIATAREVVRRGRNGIYDVSVSNDDGIVAAFRGQSRTIGGSWLDDNGR
Specific function: Thioesterase with a preference for ring-hydroxylated phenylacetyl-CoA esters. Hydrolyzes 3,4-dihydroxyphenylacetyl-CoA, 3-hydroxyphenylacetyl-CoA and 4-hydroxyphenylacetyl-CoA. Inactive towards 4-hydroxybenzoyl-CoA and 4-hydroxyphenacyl-CoA [H]
COG id: COG2050
COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thioesterase PaaI family [H]
Homologues:
Organism=Escherichia coli, GI1787662, Length=125, Percent_Identity=44.8, Blast_Score=113, Evalue=6e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011973 - InterPro: IPR003736 - InterPro: IPR006683 [H]
Pfam domain/function: PF03061 4HBT [H]
EC number: NA
Molecular weight: Translated: 16167; Mature: 16036
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEEHQPPPPESADNIARHVGQAMFEVDRATRSLGIELDEIGPGFATLSLRLGAAMANGH CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCEEEEEEEECEEEECCC GTAHGGLIFTLADSAFAFACNSHGERAVAAHCSITFLAPARPGERLIATAREVVRRGRNG CCCCCCEEEEECCCEEEEEECCCCCEEEEEEEEEEEEECCCCCHHHHHHHHHHHHCCCCC IYDVSVSNDDGIVAAFRGQSRTIGGSWLDDNGR EEEEEECCCCCEEEEECCCCEECCCCCCCCCCC >Mature Secondary Structure TEEHQPPPPESADNIARHVGQAMFEVDRATRSLGIELDEIGPGFATLSLRLGAAMANGH CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCEEEEEEEECEEEECCC GTAHGGLIFTLADSAFAFACNSHGERAVAAHCSITFLAPARPGERLIATAREVVRRGRNG CCCCCCEEEEECCCEEEEEECCCCCEEEEEEEEEEEEECCCCCHHHHHHHHHHHHCCCCC IYDVSVSNDDGIVAAFRGQSRTIGGSWLDDNGR EEEEEECCCCCEEEEECCCCEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9748275; 9278503; 10766858 [H]