| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is 148259495
Identifier: 148259495
GI number: 148259495
Start: 532266
End: 533063
Strand: Reverse
Name: 148259495
Synonym: Acry_0479
Alternate gene names: NA
Gene position: 533063-532266 (Counterclockwise)
Preceding gene: 148259496
Following gene: 148259494
Centisome position: 15.73
GC content: 72.56
Gene sequence:
>798_bases ATGAGCGCCACGGGGAACCGCACCCGGCAGATGCGGGCGGCGGTGCTCGCCCTCGCCGCGGCATCGCTCGCCGGCTGCGC GGCGCCGCAAAGAATGGGTGCGAACGAACCGACGCTCGGCGCCAACACGCTGAACGTTGCCAGAACGGCGCTTGCGGGCA ACCGGCCGGATCTCGCCCTGCATGTCGCCAACGCGGTGCTGAAGGTTGATCCTGGCAATGACGAGGCGCGGCTGGTGCAT GGCGACGCCGCCTATCTGCTCGGCGACTGCCGGACGGCGTCGGCCGATTACCGGGCGGTGCTGAAGGCCGCGCCACACAC GGCGGGAGCGGAGATCGGCCTCGGGCGCTGTGCGCTCCGCACGAATGGTCGGGGCGCGGTTGCTGCGTTCCGGCAGGCGG CGGGCGACGATCCGCACAACGCCGTCGCCTTCAATGATCTCGGCGTCGCCCTTGCCAAGCGGGGCGCGTTCGGCGCCGCG GTTCCGGCATTCCGCAAGGCGCTGGCGCTCCGCCCGTCGTTCGCGGCGGCGCGTGCCAATCTGGGGCTTGCGACCGCGCT CGAAGGACAGCCTGGCGCCGGCGCGGCGATCATCGCGCCGCTCGCGCAGGGGGCGCAGGCCTCGGCGCCGGAACGCGCGA ATTACGCCGCTGCGCTGGCGATGGCCGGGGATGAAGCCTCGGCGCAACGCGTGCTGAGCGCAGACATGCCGGCGGCCGAG GCTCGCGACATGGTGGCACAGCTGGCGCGGATCACGACCGTGCCGCATGCCGGTCAACCGCCGCACGCGGCCAATTAA
Upstream 100 bases:
>100_bases CGTCCGGCGCGGCGGGTAGCGCAGGCGGCGGCGGTACCTCGCTCGGCGGCGCGGGCGGCGGCCTGGCCGCGTCGTCCGGC GGAATGGGAGGGAGCGGACA
Downstream 100 bases:
>100_bases CGTGCCGGGCGCCGGCTCGTTGCCGGACGGCGCGGCTATTGTGCAACCGATGATGGCGGAGTGAGGCCTCACACGCGGCT GGCGCAGCAGCGGTGGTTGC
Product: TPR repeat-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MSATGNRTRQMRAAVLALAAASLAGCAAPQRMGANEPTLGANTLNVARTALAGNRPDLALHVANAVLKVDPGNDEARLVH GDAAYLLGDCRTASADYRAVLKAAPHTAGAEIGLGRCALRTNGRGAVAAFRQAAGDDPHNAVAFNDLGVALAKRGAFGAA VPAFRKALALRPSFAAARANLGLATALEGQPGAGAAIIAPLAQGAQASAPERANYAAALAMAGDEASAQRVLSADMPAAE ARDMVAQLARITTVPHAGQPPHAAN
Sequences:
>Translated_265_residues MSATGNRTRQMRAAVLALAAASLAGCAAPQRMGANEPTLGANTLNVARTALAGNRPDLALHVANAVLKVDPGNDEARLVH GDAAYLLGDCRTASADYRAVLKAAPHTAGAEIGLGRCALRTNGRGAVAAFRQAAGDDPHNAVAFNDLGVALAKRGAFGAA VPAFRKALALRPSFAAARANLGLATALEGQPGAGAAIIAPLAQGAQASAPERANYAAALAMAGDEASAQRVLSADMPAAE ARDMVAQLARITTVPHAGQPPHAAN >Mature_264_residues SATGNRTRQMRAAVLALAAASLAGCAAPQRMGANEPTLGANTLNVARTALAGNRPDLALHVANAVLKVDPGNDEARLVHG DAAYLLGDCRTASADYRAVLKAAPHTAGAEIGLGRCALRTNGRGAVAAFRQAAGDDPHNAVAFNDLGVALAKRGAFGAAV PAFRKALALRPSFAAARANLGLATALEGQPGAGAAIIAPLAQGAQASAPERANYAAALAMAGDEASAQRVLSADMPAAEA RDMVAQLARITTVPHAGQPPHAAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26538; Mature: 26407
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR L=RR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSATGNRTRQMRAAVLALAAASLAGCAAPQRMGANEPTLGANTLNVARTALAGNRPDLAL CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHCCCCCCEEE HVANAVLKVDPGNDEARLVHGDAAYLLGDCRTASADYRAVLKAAPHTAGAEIGLGRCALR EEEEEEEEECCCCCCEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEE TNGRGAVAAFRQAAGDDPHNAVAFNDLGVALAKRGAFGAAVPAFRKALALRPSFAAARAN ECCCHHHHHHHHHCCCCCCCEEEEHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHC LGLATALEGQPGAGAAIIAPLAQGAQASAPERANYAAALAMAGDEASAQRVLSADMPAAE CCEEEEECCCCCCCHHHHHHHHCCCCCCCCCHHHHEEEEEECCCHHHHHHHHHCCCCHHH ARDMVAQLARITTVPHAGQPPHAAN HHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure SATGNRTRQMRAAVLALAAASLAGCAAPQRMGANEPTLGANTLNVARTALAGNRPDLAL CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHCCCCCCEEE HVANAVLKVDPGNDEARLVHGDAAYLLGDCRTASADYRAVLKAAPHTAGAEIGLGRCALR EEEEEEEEECCCCCCEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEE TNGRGAVAAFRQAAGDDPHNAVAFNDLGVALAKRGAFGAAVPAFRKALALRPSFAAARAN ECCCHHHHHHHHHCCCCCCCEEEEHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHC LGLATALEGQPGAGAAIIAPLAQGAQASAPERANYAAALAMAGDEASAQRVLSADMPAAE CCEEEEECCCCCCCHHHHHHHHCCCCCCCCCHHHHEEEEEECCCHHHHHHHHHCCCCHHH ARDMVAQLARITTVPHAGQPPHAAN HHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA