Definition Acidiphilium cryptum JF-5 chromosome, complete genome.
Accession NC_009484
Length 3,389,227

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The map label for this gene is kdgK [H]

Identifier: 148259473

GI number: 148259473

Start: 509103

End: 510044

Strand: Reverse

Name: kdgK [H]

Synonym: Acry_0457

Alternate gene names: 148259473

Gene position: 510044-509103 (Counterclockwise)

Preceding gene: 148259474

Following gene: 148259472

Centisome position: 15.05

GC content: 65.5

Gene sequence:

>942_bases
ATGACCGGCATGATCGTGACCATGGGTGAAATCCTCGTCGACATTCTCGCCGAGGAAAAGGGCCAGGGCTTCCACGAGCC
CGGCCGGCTGCTTGGCCCCTTCCCCGGCGGCGCGCCGGCGACCTTCATCGCCCAGGCCGCACGGCTTGGTGCTGGCGCGG
GCATCATCTCCTGCATCGGCGACGACGATTTCGGCTGGCTCTGCGTCGACCGGCTGCGGCGCGAGGGGGCGGATGTGAGC
GCCGTGCGGATCGAGCCGGACCAGGTGACGGCAAGCGCCTTCGTGCGCTACCGCGAGGATGGCGACCGCGACTTCCTGTT
CAACCTCAAGCGCAGCGCCGCGGGGCGGATCACGATCGACGCCGCCGCACGGGCGATGCTCGCTCAATGCGCGCATTTCC
ACATCATGGGGTCGTCGCTCTTCTCGTTTCATATCATTGACGAAATGAAAAAGGCGATCGAGCTGGCCAAGGCGAACGGC
GCGGTGATTTCCTTCGATCCGAACATCCGCAAGGAAATGCTGATGATTCCGGAAATGCGCGCGGGCCTCGAATTCATGCT
CGGCTATACCGACATCTTCATGCCGTCAGGCCCTGAGATCCTGCTGCCGACCGAGGCGAAGTCGGAACGCGCGGCGGTCG
AGGAACTGCTCGATCTCGGCGTACGGATGGTAGTGATCAAACGCAGCCGCAAGGGTGTGAGTTTCCGCTCGCGCGATGAA
CAATTCGACCTGCCGGCGTTTCCGGTGGAGGAGATCGACCCGACCGGGGCGGGCGACTGTTTCGGCGCTGCCTTCGTCAC
CTGCCTGTTGCAGGGGATGGGGACAAGGCGGGCGCTCGACTATGCCCGCGCGGCGGGCGCGCTCGCCGTCAGCCGCAAGG
GCGGGATGGAAGGGGTTGCCGACTTCGCAACGCTCGACGCCTTCATCGCCGCCGCGGGCTGA

Upstream 100 bases:

>100_bases
CCGGCTTCAGGCCTGTCGAGACCGATGGCGGAACCGAGGCGCATTTCTCCAGCCATCCCGCGCATAGCCGGAGCGGCGCC
AGGGCGTTCGGCGAGGCGTC

Downstream 100 bases:

>100_bases
GCGGCAACCGGAACGAGGAGGACCGCCATGAGCCACCCGGCAAACCATATCGTCATTGGCGTCGATGTCGGCACCGGCAG
CGCTCGCGCTGGCGTGTTCG

Product: ribokinase-like domain-containing protein

Products: NA

Alternate protein names: 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase [H]

Number of amino acids: Translated: 313; Mature: 312

Protein sequence:

>313_residues
MTGMIVTMGEILVDILAEEKGQGFHEPGRLLGPFPGGAPATFIAQAARLGAGAGIISCIGDDDFGWLCVDRLRREGADVS
AVRIEPDQVTASAFVRYREDGDRDFLFNLKRSAAGRITIDAAARAMLAQCAHFHIMGSSLFSFHIIDEMKKAIELAKANG
AVISFDPNIRKEMLMIPEMRAGLEFMLGYTDIFMPSGPEILLPTEAKSERAAVEELLDLGVRMVVIKRSRKGVSFRSRDE
QFDLPAFPVEEIDPTGAGDCFGAAFVTCLLQGMGTRRALDYARAAGALAVSRKGGMEGVADFATLDAFIAAAG

Sequences:

>Translated_313_residues
MTGMIVTMGEILVDILAEEKGQGFHEPGRLLGPFPGGAPATFIAQAARLGAGAGIISCIGDDDFGWLCVDRLRREGADVS
AVRIEPDQVTASAFVRYREDGDRDFLFNLKRSAAGRITIDAAARAMLAQCAHFHIMGSSLFSFHIIDEMKKAIELAKANG
AVISFDPNIRKEMLMIPEMRAGLEFMLGYTDIFMPSGPEILLPTEAKSERAAVEELLDLGVRMVVIKRSRKGVSFRSRDE
QFDLPAFPVEEIDPTGAGDCFGAAFVTCLLQGMGTRRALDYARAAGALAVSRKGGMEGVADFATLDAFIAAAG
>Mature_312_residues
TGMIVTMGEILVDILAEEKGQGFHEPGRLLGPFPGGAPATFIAQAARLGAGAGIISCIGDDDFGWLCVDRLRREGADVSA
VRIEPDQVTASAFVRYREDGDRDFLFNLKRSAAGRITIDAAARAMLAQCAHFHIMGSSLFSFHIIDEMKKAIELAKANGA
VISFDPNIRKEMLMIPEMRAGLEFMLGYTDIFMPSGPEILLPTEAKSERAAVEELLDLGVRMVVIKRSRKGVSFRSRDEQ
FDLPAFPVEEIDPTGAGDCFGAAFVTCLLQGMGTRRALDYARAAGALAVSRKGGMEGVADFATLDAFIAAAG

Specific function: Unknown

COG id: COG0524

COG function: function code G; Sugar kinases, ribokinase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carbohydrate kinase pfkB family [H]

Homologues:

Organism=Escherichia coli, GI87081971, Length=307, Percent_Identity=25.0814332247557, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI1790193, Length=317, Percent_Identity=25.8675078864353, Blast_Score=71, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17532905, Length=309, Percent_Identity=25.8899676375405, Blast_Score=65, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011611
- InterPro:   IPR002173 [H]

Pfam domain/function: PF00294 PfkB [H]

EC number: =2.7.1.45 [H]

Molecular weight: Translated: 33644; Mature: 33513

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: PS00584 PFKB_KINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGMIVTMGEILVDILAEEKGQGFHEPGRLLGPFPGGAPATFIAQAARLGAGAGIISCIG
CCCEEEHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCHHHHHHHHHHHCCCCCEEEEEC
DDDFGWLCVDRLRREGADVSAVRIEPDQVTASAFVRYREDGDRDFLFNLKRSAAGRITID
CCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCHHHEEEEHHCCCCEEEHH
AAARAMLAQCAHFHIMGSSLFSFHIIDEMKKAIELAKANGAVISFDPNIRKEMLMIPEMR
HHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHCCHHH
AGLEFMLGYTDIFMPSGPEILLPTEAKSERAAVEELLDLGVRMVVIKRSRKGVSFRSRDE
HHHHHHHCHHHEECCCCCCEEECCCCCHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCC
QFDLPAFPVEEIDPTGAGDCFGAAFVTCLLQGMGTRRALDYARAAGALAVSRKGGMEGVA
CCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEECCCCCCHHH
DFATLDAFIAAAG
HHHHHHHHHHCCC
>Mature Secondary Structure 
TGMIVTMGEILVDILAEEKGQGFHEPGRLLGPFPGGAPATFIAQAARLGAGAGIISCIG
CCEEEHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCHHHHHHHHHHHCCCCCEEEEEC
DDDFGWLCVDRLRREGADVSAVRIEPDQVTASAFVRYREDGDRDFLFNLKRSAAGRITID
CCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCHHHEEEEHHCCCCEEEHH
AAARAMLAQCAHFHIMGSSLFSFHIIDEMKKAIELAKANGAVISFDPNIRKEMLMIPEMR
HHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHCCHHH
AGLEFMLGYTDIFMPSGPEILLPTEAKSERAAVEELLDLGVRMVVIKRSRKGVSFRSRDE
HHHHHHHCHHHEECCCCCCEEECCCCCHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCC
QFDLPAFPVEEIDPTGAGDCFGAAFVTCLLQGMGTRRALDYARAAGALAVSRKGGMEGVA
CCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEECCCCCCHHH
DFATLDAFIAAAG
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]