| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
Click here to switch to the map view.
The map label for this gene is 148259137
Identifier: 148259137
GI number: 148259137
Start: 129367
End: 130599
Strand: Reverse
Name: 148259137
Synonym: Acry_0117
Alternate gene names: NA
Gene position: 130599-129367 (Counterclockwise)
Preceding gene: 148259138
Following gene: 148259135
Centisome position: 3.85
GC content: 67.64
Gene sequence:
>1233_bases ATGACCCGCGTCCATGTGATCGGCGCCGGCATGGCCGGGCTGTCCGCGGCGACAACCCTCGCCGCGCGGGGGTGCCGGGT GGTGCTGTACGAGGCGGCGAAATGGGCCGGTGGGCGCTGCCGCTCCTATCACGACGCCGCACTTGGCTGCCGCATCGACA ATGGCAACCACCTTCTGCTGTCGGGCAACCGCAGCACGATGGCCTATCTGCGGCGGATCGGCGCCGAGGAAACACTGACC GGGCCGAGCCGCCCGCTTTTTCCGTTCATCGACCTTATTTCCGGCGATGCCTGGACGCTGCGGCTCAACCGCGGCAGGCT GCCTTGGTGGGTGCTGCGCCGGGATTGGCGCGTGCCTGGCACTGACGCGCTGGACTATCTCGCGCTGCGCCGGCTCGAAC GCGCGGCGGTAACAGACACAGTGGCCGGGATGCTTGGCGGATTGGGCACGTTGTATGATCGGCTGCTCGAACCGCTGGCG ATCGCGGCGCTCAACACGAAACCGGAGACGGCCTCCGCTGCGCCGCTGGCCGCGGTTGTCCGGGAAAGCCTCGCGCGCGG AGGCGCCGCGACCATACCGCGTATGCCGAAGATCGGGCTTTCGGAGAGCCTTGTCGATCCCGCCCTCGCCTTTCTGCGCG CAAGCGGGGCCGAATTGCGCTTCGGTGCGCGGATCGCCGGACTGACGATGACCGATGCGCGGGTGACCGGCCTGGTCGGC CCCAATGTCGATGAGATCGTCGGGTCCGACGAACGGGTCATCTTGGCCACTCCACCCTGGGTCGCGGCCGAACTGCTGCC CGGCCTCACCGTGCCCGACGCTCACGAGGCGATCATCAACCTGCATTTCCGTGCCGGCATCGATCCGGGGCCGGCCGGCT TCTACGGCCTGATCGGCGGTACCGCCGAATGGGTGTTCGAGAAACCCGAAGTGGTTTCCGTGACCATCAGCGCGGCGAAT GACCGTCTCGAGCAGGAGACCGATCGCCTTGCCGCCGAAGTGTGGTCCGATCTGCGCCGTGGTTTCGGTCTGCCACGCGC CATGCCTCCGTGGCGCGTTGTGAAGGAGAAGCGTGCAACCTTCGCTGCGACACCGGAACAGCTTGCGCGCCGACCGGGCT CAAGCACCCGGCTCGTCAACCTGCGCCTCGCCGGGGACTATACCGCGACCGGCCTGCCCTCGACCATTGAAGGGGCGATC CGATCAGGCGAATCTGCAGCGCAGCATATCTGA
Upstream 100 bases:
>100_bases GCGCGGCGGGTTTCGCCCATCCCGAGCGCCGGCTCAGCCTGCCAGCCTGGCGCAAGCTGCGCCTTGCCGCCGAGCTTCTC ATCCGGACTGACCGGCACCG
Downstream 100 bases:
>100_bases CGCCATAACTTTCGACATCGCCGAAACTCGAAACCAGATTGCCCGTTGACCTCTTCCACGCATTGGGCCAACGCCTCATT TCTGGAGGAAAATCAGACAT
Product: amine oxidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 410; Mature: 409
Protein sequence:
>410_residues MTRVHVIGAGMAGLSAATTLAARGCRVVLYEAAKWAGGRCRSYHDAALGCRIDNGNHLLLSGNRSTMAYLRRIGAEETLT GPSRPLFPFIDLISGDAWTLRLNRGRLPWWVLRRDWRVPGTDALDYLALRRLERAAVTDTVAGMLGGLGTLYDRLLEPLA IAALNTKPETASAAPLAAVVRESLARGGAATIPRMPKIGLSESLVDPALAFLRASGAELRFGARIAGLTMTDARVTGLVG PNVDEIVGSDERVILATPPWVAAELLPGLTVPDAHEAIINLHFRAGIDPGPAGFYGLIGGTAEWVFEKPEVVSVTISAAN DRLEQETDRLAAEVWSDLRRGFGLPRAMPPWRVVKEKRATFAATPEQLARRPGSSTRLVNLRLAGDYTATGLPSTIEGAI RSGESAAQHI
Sequences:
>Translated_410_residues MTRVHVIGAGMAGLSAATTLAARGCRVVLYEAAKWAGGRCRSYHDAALGCRIDNGNHLLLSGNRSTMAYLRRIGAEETLT GPSRPLFPFIDLISGDAWTLRLNRGRLPWWVLRRDWRVPGTDALDYLALRRLERAAVTDTVAGMLGGLGTLYDRLLEPLA IAALNTKPETASAAPLAAVVRESLARGGAATIPRMPKIGLSESLVDPALAFLRASGAELRFGARIAGLTMTDARVTGLVG PNVDEIVGSDERVILATPPWVAAELLPGLTVPDAHEAIINLHFRAGIDPGPAGFYGLIGGTAEWVFEKPEVVSVTISAAN DRLEQETDRLAAEVWSDLRRGFGLPRAMPPWRVVKEKRATFAATPEQLARRPGSSTRLVNLRLAGDYTATGLPSTIEGAI RSGESAAQHI >Mature_409_residues TRVHVIGAGMAGLSAATTLAARGCRVVLYEAAKWAGGRCRSYHDAALGCRIDNGNHLLLSGNRSTMAYLRRIGAEETLTG PSRPLFPFIDLISGDAWTLRLNRGRLPWWVLRRDWRVPGTDALDYLALRRLERAAVTDTVAGMLGGLGTLYDRLLEPLAI AALNTKPETASAAPLAAVVRESLARGGAATIPRMPKIGLSESLVDPALAFLRASGAELRFGARIAGLTMTDARVTGLVGP NVDEIVGSDERVILATPPWVAAELLPGLTVPDAHEAIINLHFRAGIDPGPAGFYGLIGGTAEWVFEKPEVVSVTISAAND RLEQETDRLAAEVWSDLRRGFGLPRAMPPWRVVKEKRATFAATPEQLARRPGSSTRLVNLRLAGDYTATGLPSTIEGAIR SGESAAQHI
Specific function: Possible flavoprotein oxidoreductase. Probably part of an operon y4aABCD involved in the synthesis of an isoprenoid compound [H]
COG id: COG2907
COG function: function code R; Predicted NAD/FAD-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To phytoene dehydrogenase and to amine oxidase [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002937 - InterPro: IPR016040 - InterPro: IPR003042 - InterPro: IPR017830 [H]
Pfam domain/function: PF01593 Amino_oxidase [H]
EC number: NA
Molecular weight: Translated: 43871; Mature: 43740
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRVHVIGAGMAGLSAATTLAARGCRVVLYEAAKWAGGRCRSYHDAALGCRIDNGNHLLL CCEEEEEECCCHHHHHHHHHHHCCCEEEEEECHHCCCCCCCCCCCCEEEEEECCCCEEEE SGNRSTMAYLRRIGAEETLTGPSRPLFPFIDLISGDAWTLRLNRGRLPWWVLRRDWRVPG ECCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCEEEEEECCCCCCEEEEEECCCCCC TDALDYLALRRLERAAVTDTVAGMLGGLGTLYDRLLEPLAIAALNTKPETASAAPLAAVV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHH RESLARGGAATIPRMPKIGLSESLVDPALAFLRASGAELRFGARIAGLTMTDARVTGLVG HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCEEECEEEECCEEEECCC PNVDEIVGSDERVILATPPWVAAELLPGLTVPDAHEAIINLHFRAGIDPGPAGFYGLIGG CCHHHHCCCCCEEEEECCCHHHHHHCCCCCCCCCHHHHEEEEEECCCCCCCCCHHHHCCC TAEWVFEKPEVVSVTISAANDRLEQETDRLAAEVWSDLRRGFGLPRAMPPWRVVKEKRAT CHHHEECCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH FAATPEQLARRPGSSTRLVNLRLAGDYTATGLPSTIEGAIRSGESAAQHI HCCCHHHHHHCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHCCCHHHCCC >Mature Secondary Structure TRVHVIGAGMAGLSAATTLAARGCRVVLYEAAKWAGGRCRSYHDAALGCRIDNGNHLLL CEEEEEECCCHHHHHHHHHHHCCCEEEEEECHHCCCCCCCCCCCCEEEEEECCCCEEEE SGNRSTMAYLRRIGAEETLTGPSRPLFPFIDLISGDAWTLRLNRGRLPWWVLRRDWRVPG ECCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCEEEEEECCCCCCEEEEEECCCCCC TDALDYLALRRLERAAVTDTVAGMLGGLGTLYDRLLEPLAIAALNTKPETASAAPLAAVV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHH RESLARGGAATIPRMPKIGLSESLVDPALAFLRASGAELRFGARIAGLTMTDARVTGLVG HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCEEECEEEECCEEEECCC PNVDEIVGSDERVILATPPWVAAELLPGLTVPDAHEAIINLHFRAGIDPGPAGFYGLIGG CCHHHHCCCCCEEEEECCCHHHHHHCCCCCCCCCHHHHEEEEEECCCCCCCCCHHHHCCC TAEWVFEKPEVVSVTISAANDRLEQETDRLAAEVWSDLRRGFGLPRAMPPWRVVKEKRAT CHHHEECCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH FAATPEQLARRPGSSTRLVNLRLAGDYTATGLPSTIEGAIRSGESAAQHI HCCCHHHHHHCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]