| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is wtpB [H]
Identifier: 148259030
GI number: 148259030
Start: 10125
End: 10877
Strand: Reverse
Name: wtpB [H]
Synonym: Acry_0009
Alternate gene names: 148259030
Gene position: 10877-10125 (Counterclockwise)
Preceding gene: 148259031
Following gene: 148259029
Centisome position: 0.32
GC content: 69.06
Gene sequence:
>753_bases CTGACCGGAGCACGCCTCGGGGCCCTGCTGCGCGGCTTGGTGCTGCTGCTGCTCGCTTGCCCCTTCGCTGGTCTGTTCAT CATGACCGACTGGCGCAAATTCGCCCTGTCCAGCGCGGATGGCAGATCGGTGGCGATTTCGCTGGCCTACGGGCTGGCGG CCCTGGCCGTGATTGCGGTGCTGGGAACGCCACTCGCCTACTGGCTGGCAACCGGCAAGGGACGGATGCGCGACGGGGCG CAAGTCTTCCTGCTGCTGCCGCTGCTTACCCCGCCGCTCGCGCTCGGCATCCTGCTCGCCGCATTCTACGGCCCGATCGG CCCGGTCGGCATCCTACTCGAACGGTTCGGCGGGATCATCACCAACAATCCGCCGGCGCTGCTGATCGCGGGGATCTATG CCGGCCTGCCGACCTATGTGGTCGCGGCACGCGGCGCGTTCGCCGAGATACCCGCCGAACTGGCCGAATCTGCGCTGACC CTCGGCGTCTCCCGCCGGCAGATCTTCCGCCACATCACCCTGCCGATGGCGCGCGACGGGCTCGGCGCCGCCCTCGCGCT GGCCTGGGTGCGCGGGGTGGGCGAACTCGGCATCGTGCTGATCTTCGCCTACTTCCCGCAGGGCATGCCGGTGCGCCTGT GGGTGGATCTTGAAGACGGCGGGCTTTCGGCCACATTCCCGTTGCTCTGGCTGTTCCTGCTCGCCGCCCTGCCGTTGCCG CTCTGGCTACTGCGGCGGGGCTCGAAACGCTGA
Upstream 100 bases:
>100_bases ACCCGGAGGCGGGACGGGCCTTCGTTTCACTGCTGCAAAGCCGCAAGGGACAGGAACTGTTCGCACGATACGGCTACAAC CCGCCGCTGGGCGGGCCGGT
Downstream 100 bases:
>100_bases GGATGATGCCGATGAAACGGCCGGTTTCGTTCGCACTGGCGCTGATGGCCCTGGCCGGAACGGCGCGCGCCAGCGGATTT TCCCTGCGATCGGGCGCGTT
Product: binding-protein-dependent transport systems inner membrane component
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 250; Mature: 249
Protein sequence:
>250_residues MTGARLGALLRGLVLLLLACPFAGLFIMTDWRKFALSSADGRSVAISLAYGLAALAVIAVLGTPLAYWLATGKGRMRDGA QVFLLLPLLTPPLALGILLAAFYGPIGPVGILLERFGGIITNNPPALLIAGIYAGLPTYVVAARGAFAEIPAELAESALT LGVSRRQIFRHITLPMARDGLGAALALAWVRGVGELGIVLIFAYFPQGMPVRLWVDLEDGGLSATFPLLWLFLLAALPLP LWLLRRGSKR
Sequences:
>Translated_250_residues MTGARLGALLRGLVLLLLACPFAGLFIMTDWRKFALSSADGRSVAISLAYGLAALAVIAVLGTPLAYWLATGKGRMRDGA QVFLLLPLLTPPLALGILLAAFYGPIGPVGILLERFGGIITNNPPALLIAGIYAGLPTYVVAARGAFAEIPAELAESALT LGVSRRQIFRHITLPMARDGLGAALALAWVRGVGELGIVLIFAYFPQGMPVRLWVDLEDGGLSATFPLLWLFLLAALPLP LWLLRRGSKR >Mature_249_residues TGARLGALLRGLVLLLLACPFAGLFIMTDWRKFALSSADGRSVAISLAYGLAALAVIAVLGTPLAYWLATGKGRMRDGAQ VFLLLPLLTPPLALGILLAAFYGPIGPVGILLERFGGIITNNPPALLIAGIYAGLPTYVVAARGAFAEIPAELAESALTL GVSRRQIFRHITLPMARDGLGAALALAWVRGVGELGIVLIFAYFPQGMPVRLWVDLEDGGLSATFPLLWLFLLAALPLPL WLLRRGSKR
Specific function: Part of the ABC transporter complex wtpABC involved in molybdate/tungstate import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4149
COG function: function code P; ABC-type molybdate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 26507; Mature: 26376
Theoretical pI: Translated: 10.62; Mature: 10.62
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGARLGALLRGLVLLLLACPFAGLFIMTDWRKFALSSADGRSVAISLAYGLAALAVIAV CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHH LGTPLAYWLATGKGRMRDGAQVFLLLPLLTPPLALGILLAAFYGPIGPVGILLERFGGII HHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCC TNNPPALLIAGIYAGLPTYVVAARGAFAEIPAELAESALTLGVSRRQIFRHITLPMARDG CCCCCHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCC LGAALALAWVRGVGELGIVLIFAYFPQGMPVRLWVDLEDGGLSATFPLLWLFLLAALPLP HHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHH LWLLRRGSKR HHHHHCCCCC >Mature Secondary Structure TGARLGALLRGLVLLLLACPFAGLFIMTDWRKFALSSADGRSVAISLAYGLAALAVIAV CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHH LGTPLAYWLATGKGRMRDGAQVFLLLPLLTPPLALGILLAAFYGPIGPVGILLERFGGII HHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCC TNNPPALLIAGIYAGLPTYVVAARGAFAEIPAELAESALTLGVSRRQIFRHITLPMARDG CCCCCHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCC LGAALALAWVRGVGELGIVLIFAYFPQGMPVRLWVDLEDGGLSATFPLLWLFLLAALPLP HHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHH LWLLRRGSKR HHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]