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The map label for this gene is ybcL [H]

Identifier: 148259029

GI number: 148259029

Start: 9556

End: 10113

Strand: Reverse

Name: ybcL [H]

Synonym: Acry_0008

Alternate gene names: 148259029

Gene position: 10113-9556 (Counterclockwise)

Preceding gene: 148259030

Following gene: 148259023

Centisome position: 0.3

GC content: 71.33

Gene sequence:

>558_bases
ATGAAACGGCCGGTTTCGTTCGCACTGGCGCTGATGGCCCTGGCCGGAACGGCGCGCGCCAGCGGATTTTCCCTGCGATC
GGGCGCGTTTCGCGATGGCGGAACCATCGCGGCCGCCCAGGTCTTCAACCGCTTCGGCTGCACTGGCGACGATGTCAGCC
CCGCCCTCGCCTGGAGCGGCGCGCCAGCGGGCACGCGGAGCTACGCCGTCACGCTGTTCGATTCCGATGCCCGGCAGGGC
AAAGGCTACTGGCACTGGATCGTGGCGGATATTCCGGCGCGCGTCACTTCATTGCCGGCGGGTTCCGGGAGCCGGGGCGG
CGCGCTGCCGCGCGGCGCGGTTCAGGGCATCGGCAGCGGCAGCATTCATGGCTACCAGGGGCCCTGCCCGCCGGTCGGCG
ATCCGCCGCATCACTATCATCTGACAGTCTACGCGCTGCGGGTTAACCGGCTGCCGGCGGCGGCCCTGGCGTCCTATGGC
GCGCTCCGCCGGGCGCTGGCGCGGGACGCGCTGGCCAGCGCCACGATAACGGGGCTTTATGGCCGCCCGGCCAGGTGA

Upstream 100 bases:

>100_bases
TTTCGGCCACATTCCCGTTGCTCTGGCTGTTCCTGCTCGCCGCCCTGCCGTTGCCGCTCTGGCTACTGCGGCGGGGCTCG
AAACGCTGAGGATGATGCCG

Downstream 100 bases:

>100_bases
CCGGGCGGCAGCGAGCCGATCAGAACGCGGCGTCCTCGAATTCCATCATGGTCGCAGCGCCCGACCGGATCGCGGCGAGC
AGCGCGCCGGTCTGCGGCAG

Product: PEBP family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MKRPVSFALALMALAGTARASGFSLRSGAFRDGGTIAAAQVFNRFGCTGDDVSPALAWSGAPAGTRSYAVTLFDSDARQG
KGYWHWIVADIPARVTSLPAGSGSRGGALPRGAVQGIGSGSIHGYQGPCPPVGDPPHHYHLTVYALRVNRLPAAALASYG
ALRRALARDALASATITGLYGRPAR

Sequences:

>Translated_185_residues
MKRPVSFALALMALAGTARASGFSLRSGAFRDGGTIAAAQVFNRFGCTGDDVSPALAWSGAPAGTRSYAVTLFDSDARQG
KGYWHWIVADIPARVTSLPAGSGSRGGALPRGAVQGIGSGSIHGYQGPCPPVGDPPHHYHLTVYALRVNRLPAAALASYG
ALRRALARDALASATITGLYGRPAR
>Mature_185_residues
MKRPVSFALALMALAGTARASGFSLRSGAFRDGGTIAAAQVFNRFGCTGDDVSPALAWSGAPAGTRSYAVTLFDSDARQG
KGYWHWIVADIPARVTSLPAGSGSRGGALPRGAVQGIGSGSIHGYQGPCPPVGDPPHHYHLTVYALRVNRLPAAALASYG
ALRRALARDALASATITGLYGRPAR

Specific function: Unknown

COG id: COG1881

COG function: function code R; Phospholipid-binding protein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0098 family [H]

Homologues:

Organism=Escherichia coli, GI1786757, Length=177, Percent_Identity=42.9378531073446, Blast_Score=153, Evalue=7e-39,
Organism=Escherichia coli, GI1786990, Length=158, Percent_Identity=40.5063291139241, Blast_Score=117, Evalue=5e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008914
- InterPro:   IPR005247 [H]

Pfam domain/function: PF01161 PBP [H]

EC number: NA

Molecular weight: Translated: 19061; Mature: 19061

Theoretical pI: Translated: 11.01; Mature: 11.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRPVSFALALMALAGTARASGFSLRSGAFRDGGTIAAAQVFNRFGCTGDDVSPALAWSG
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEECC
APAGTRSYAVTLFDSDARQGKGYWHWIVADIPARVTSLPAGSGSRGGALPRGAVQGIGSG
CCCCCCEEEEEEEECCCCCCCCEEEEEEEECCCHHHCCCCCCCCCCCCCCCHHHHCCCCC
SIHGYQGPCPPVGDPPHHYHLTVYALRVNRLPAAALASYGALRRALARDALASATITGLY
CCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GRPAR
CCCCC
>Mature Secondary Structure
MKRPVSFALALMALAGTARASGFSLRSGAFRDGGTIAAAQVFNRFGCTGDDVSPALAWSG
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEECC
APAGTRSYAVTLFDSDARQGKGYWHWIVADIPARVTSLPAGSGSRGGALPRGAVQGIGSG
CCCCCCEEEEEEEECCCCCCCCEEEEEEEECCCHHHCCCCCCCCCCCCCCCHHHHCCCCC
SIHGYQGPCPPVGDPPHHYHLTVYALRVNRLPAAALASYGALRRALARDALASATITGLY
CCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GRPAR
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 11439028 [H]