| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
Click here to switch to the map view.
The map label for this gene is 148243499
Identifier: 148243499
GI number: 148243499
Start: 2096587
End: 2097213
Strand: Direct
Name: 148243499
Synonym: SynRCC307_2400
Alternate gene names: NA
Gene position: 2096587-2097213 (Clockwise)
Preceding gene: 148243498
Following gene: 148243500
Centisome position: 94.23
GC content: 65.07
Gene sequence:
>627_bases TTGCGCGCCGAAGAAGTCATGGACCGGGTGTTTGCCGCTGTGAATCCCCTCAACGGCACGGCTCTGGTAGCCGTTGCTGA GCCAACGGCTCCTGCAACAGCTCCAATTCAAGAGGACGCCGACGTTGCAGCACCCCCCTCGCCCTGGCGGCAGCGGCGCT GGTGGCTACTGCTGGGGGCCCTGTGCCTGTTGAGCAGCAGCGCTGCTGTGACCGCCGGTCTGCTCTGGCGCGGCTGGATG CAAGCCCGCGATGAGCTGCAGCATCAGCGCCAACTGCAATTAATTGAGCGGCTCAAGCCCGCCAGCGAGCCCGCTCCTGC TCCGGCACCGATGCCGCCCTTGCGCGTTGAAATTCCGCCGGTGATTCCCCCCGCCGCAACACTGGATCCCGCCGCTGAGC GGCCTGGTTCACCTTCACCCGCCAGTGCTGTGGTGCCAGAACTGCTGGGTGTGGTGAAAGTGCCTGGCCGCAGCGGTAGC GCCATCTTCACAACAGGCGGAAATTCACTGAGTACCGGCGTTGGCGAACCAATTGGCAGCAGCGGCTGGATCCTGGAGCA GGTCCAGGCCGATCGGGTGGTGATCCGCCAAGGCAACGACACGCTGCAACTGAGCCTGGGCCGTTAG
Upstream 100 bases:
>100_bases AGCTGATCGATAGGTTGGTGCGTTCGCGCCCCAATCCCTGACCAGCTCAACCCTGCCAGATCTGCACCAACGGCATTGCC GCCATCTGGCCTACTGGGAT
Downstream 100 bases:
>100_bases CGTCAAAACAGCTGGCCTGGCATCAACGCTTTGCCGTCCACATCTCAAACAAGGCTGCTGCGCGCCTCACCGGAGGTGTT GTGGCGTGATCCAAGCCTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MRAEEVMDRVFAAVNPLNGTALVAVAEPTAPATAPIQEDADVAAPPSPWRQRRWWLLLGALCLLSSSAAVTAGLLWRGWM QARDELQHQRQLQLIERLKPASEPAPAPAPMPPLRVEIPPVIPPAATLDPAAERPGSPSPASAVVPELLGVVKVPGRSGS AIFTTGGNSLSTGVGEPIGSSGWILEQVQADRVVIRQGNDTLQLSLGR
Sequences:
>Translated_208_residues MRAEEVMDRVFAAVNPLNGTALVAVAEPTAPATAPIQEDADVAAPPSPWRQRRWWLLLGALCLLSSSAAVTAGLLWRGWM QARDELQHQRQLQLIERLKPASEPAPAPAPMPPLRVEIPPVIPPAATLDPAAERPGSPSPASAVVPELLGVVKVPGRSGS AIFTTGGNSLSTGVGEPIGSSGWILEQVQADRVVIRQGNDTLQLSLGR >Mature_208_residues MRAEEVMDRVFAAVNPLNGTALVAVAEPTAPATAPIQEDADVAAPPSPWRQRRWWLLLGALCLLSSSAAVTAGLLWRGWM QARDELQHQRQLQLIERLKPASEPAPAPAPMPPLRVEIPPVIPPAATLDPAAERPGSPSPASAVVPELLGVVKVPGRSGS AIFTTGGNSLSTGVGEPIGSSGWILEQVQADRVVIRQGNDTLQLSLGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21925; Mature: 21925
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAEEVMDRVFAAVNPLNGTALVAVAEPTAPATAPIQEDADVAAPPSPWRQRRWWLLLGA CCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH LCLLSSSAAVTAGLLWRGWMQARDELQHQRQLQLIERLKPASEPAPAPAPMPPLRVEIPP HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCC VIPPAATLDPAAERPGSPSPASAVVPELLGVVKVPGRSGSAIFTTGGNSLSTGVGEPIGS CCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHEECCCCCCCEEEEECCCCCCCCCCCCCCC SGWILEQVQADRVVIRQGNDTLQLSLGR CCCCHHHHCCCEEEEECCCCEEEEEECC >Mature Secondary Structure MRAEEVMDRVFAAVNPLNGTALVAVAEPTAPATAPIQEDADVAAPPSPWRQRRWWLLLGA CCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH LCLLSSSAAVTAGLLWRGWMQARDELQHQRQLQLIERLKPASEPAPAPAPMPPLRVEIPP HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCC VIPPAATLDPAAERPGSPSPASAVVPELLGVVKVPGRSGSAIFTTGGNSLSTGVGEPIGS CCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHEECCCCCCCEEEEECCCCCCCCCCCCCCC SGWILEQVQADRVVIRQGNDTLQLSLGR CCCCHHHHCCCEEEEECCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA