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The map label for this gene is 148243492

Identifier: 148243492

GI number: 148243492

Start: 2089667

End: 2090581

Strand: Direct

Name: 148243492

Synonym: SynRCC307_2393

Alternate gene names: NA

Gene position: 2089667-2090581 (Clockwise)

Preceding gene: 148243487

Following gene: 148243494

Centisome position: 93.92

GC content: 64.81

Gene sequence:

>915_bases
TTGGTCGTAGCCCCTACAACCGCGCCGACAGCCGCACCCGTTGCAGATGATCTGCACGAGCGGCTTTACGGACGCCGGCC
TCCACTGCCGGCCAGTCAGCGCAAGCTGAAAGTGGGCACGACTCTGTTCATGCTGGCGATGCATGTGGGCGCCGTGTTTG
CGCTGCTGCCGCGCTTCTGGAGCTGGCAGGGCCTGGTGGCCTTTGGCGTCCTCTACTGGATGACCGTGCTGGGGGTGACC
CTGGGCCTGCACCGGCTGATGGCCCACCGCAGCTTTGAAGCCCCCAAATGGCTCGAGCGGGTGTTGGTGGTGATGGGCAC
CCTCGGCTGCCAAGGCGGCCCGGTGGAGTGGGTTGGCTTGCACCGCCACCATCACAAGTTTTCTGATCAACCGAACGATC
ACCACGACGCCGGCCGGGGCCTGTGGTGGTCGCACAGCGAATGGATGCTGCACTCCATTCCGGCCCTGAAGCACCTGGAT
CGTTTCGCCGGCGATATGCGCCGCGATCCCTTCTACAACTGGCTCGACCGCTTTTTCCTGCTGCTGCAGCTGCCCCTAGG
CGCGGCTCTCTACTGGATCGGCGAGAACACCGGCGTGCATGGCGGAGGCCTGGGCCTGGTGCTGTGGGCGATCCCCCTGC
GCCTCACCGTTGTGTATCACGTGACCTGGCTGGTGAACTCCGCCACCCACGTCTGGGGTTATCGCAACTTCGATTGCCCT
GACCGCTCCACCAACTGCTGGTGGGTGGCGATCCTCAGCTTTGGCGAGGGCTGGCACAACAACCACCACGCCTTTCCCCA
CTCAGCCCGCCACGGCCTGCGCTGGTTTGAATTCGACATCACCTGGCAGCACATCCGGGCCCTCAAGAGCCTGGGCTTGG
CCAAGCGCATTCGCCTGGCCCACTACCGGCCCTGA

Upstream 100 bases:

>100_bases
GCCAGCCTGCTTCAGCAACGGTTTTCTTTAACGGGAGCTAAGTTCATCCGGCTTATGCGTCGCAACTGCGACACGGCATC
AGCCGTTTACGGAGTCTCTT

Downstream 100 bases:

>100_bases
CGCAGGCGCTCCAATAGCGCCTCGGGCCCTGAGGCCACCAGCTCTTGCATGCCAAGGGCTTCCAGGGTGATCAACAGATC
GCCGAGCTCACTATCGAACT

Product: Fatty-acid desaturase

Products: NA

Alternate protein names: Fatty Acid Desaturase; Delta-9 Acyl-Phospholipid Desaturase; Fatty-Acid Desaturase; Delta-9 Desaturase; Fatty Acid Desaturase Subfamily; Acyl-CoA Desaturase; Delta 9 Acyl-Lipid Fatty Acid Desaturase; Fatty Acid Desaturase Family Protein; Fatty Acid Desaturase Family Proteiin; Stearoyl-CoA Desaturase; Fatty Acid Desaturase Domain Protein; Palmitoyl-Monogalactosyldiacylglycerol Delta-7 Desaturase; Delta-9 Acyl-Lipid Desaturase; Delta 9 Acyl-Lipid Desaturase; Fatty Acid Desaturase Protein; Membrane-Bound Fatty Acid Desaturase; Long Chain Acyl-CoA Desaturase; Stearoyl-CoA Desaturase Oxidoreductase; Delta-9 Fatty Acid Desaturase; Fatty-Acid Desaturase Transmenbrane Protein; Delta-9 Fatty Ac Id Desaturase; Fatty Acid-CoA Desaturase; Acyl-Coa Desaturase; Delta-9-Acyl-Lipid Fatty Acid Desaturase; Transmembrane Fatty Acid Desaturase; Syn-2 Delta 9 Acyl-Lipid Fatty Acid Desaturase; Eucaryotic Stearoyl-CoA 9-Desaturase

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MVVAPTTAPTAAPVADDLHERLYGRRPPLPASQRKLKVGTTLFMLAMHVGAVFALLPRFWSWQGLVAFGVLYWMTVLGVT
LGLHRLMAHRSFEAPKWLERVLVVMGTLGCQGGPVEWVGLHRHHHKFSDQPNDHHDAGRGLWWSHSEWMLHSIPALKHLD
RFAGDMRRDPFYNWLDRFFLLLQLPLGAALYWIGENTGVHGGGLGLVLWAIPLRLTVVYHVTWLVNSATHVWGYRNFDCP
DRSTNCWWVAILSFGEGWHNNHHAFPHSARHGLRWFEFDITWQHIRALKSLGLAKRIRLAHYRP

Sequences:

>Translated_304_residues
MVVAPTTAPTAAPVADDLHERLYGRRPPLPASQRKLKVGTTLFMLAMHVGAVFALLPRFWSWQGLVAFGVLYWMTVLGVT
LGLHRLMAHRSFEAPKWLERVLVVMGTLGCQGGPVEWVGLHRHHHKFSDQPNDHHDAGRGLWWSHSEWMLHSIPALKHLD
RFAGDMRRDPFYNWLDRFFLLLQLPLGAALYWIGENTGVHGGGLGLVLWAIPLRLTVVYHVTWLVNSATHVWGYRNFDCP
DRSTNCWWVAILSFGEGWHNNHHAFPHSARHGLRWFEFDITWQHIRALKSLGLAKRIRLAHYRP
>Mature_304_residues
MVVAPTTAPTAAPVADDLHERLYGRRPPLPASQRKLKVGTTLFMLAMHVGAVFALLPRFWSWQGLVAFGVLYWMTVLGVT
LGLHRLMAHRSFEAPKWLERVLVVMGTLGCQGGPVEWVGLHRHHHKFSDQPNDHHDAGRGLWWSHSEWMLHSIPALKHLD
RFAGDMRRDPFYNWLDRFFLLLQLPLGAALYWIGENTGVHGGGLGLVLWAIPLRLTVVYHVTWLVNSATHVWGYRNFDCP
DRSTNCWWVAILSFGEGWHNNHHAFPHSARHGLRWFEFDITWQHIRALKSLGLAKRIRLAHYRP

Specific function: Unknown

COG id: COG1398

COG function: function code I; Fatty-acid desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI53759151, Length=297, Percent_Identity=31.3131313131313, Blast_Score=123, Evalue=2e-28,
Organism=Homo sapiens, GI148596961, Length=267, Percent_Identity=31.8352059925094, Blast_Score=102, Evalue=4e-22,
Organism=Homo sapiens, GI148596938, Length=113, Percent_Identity=36.283185840708, Blast_Score=69, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI17561776, Length=238, Percent_Identity=28.9915966386555, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17540878, Length=245, Percent_Identity=28.1632653061224, Blast_Score=99, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17561774, Length=269, Percent_Identity=26.3940520446097, Blast_Score=94, Evalue=7e-20,
Organism=Saccharomyces cerevisiae, GI6321383, Length=258, Percent_Identity=32.1705426356589, Blast_Score=111, Evalue=1e-25,
Organism=Drosophila melanogaster, GI24646303, Length=249, Percent_Identity=33.7349397590361, Blast_Score=122, Evalue=2e-28,
Organism=Drosophila melanogaster, GI24646299, Length=249, Percent_Identity=33.7349397590361, Blast_Score=122, Evalue=2e-28,
Organism=Drosophila melanogaster, GI24646305, Length=249, Percent_Identity=33.7349397590361, Blast_Score=122, Evalue=2e-28,
Organism=Drosophila melanogaster, GI24646301, Length=249, Percent_Identity=33.7349397590361, Blast_Score=122, Evalue=2e-28,
Organism=Drosophila melanogaster, GI24646297, Length=249, Percent_Identity=33.7349397590361, Blast_Score=122, Evalue=2e-28,
Organism=Drosophila melanogaster, GI24646295, Length=251, Percent_Identity=34.2629482071713, Blast_Score=111, Evalue=5e-25,
Organism=Drosophila melanogaster, GI24646500, Length=268, Percent_Identity=27.6119402985075, Blast_Score=110, Evalue=2e-24,
Organism=Drosophila melanogaster, GI24662393, Length=295, Percent_Identity=27.7966101694915, Blast_Score=106, Evalue=2e-23,
Organism=Drosophila melanogaster, GI21358571, Length=203, Percent_Identity=33.0049261083744, Blast_Score=102, Evalue=2e-22,
Organism=Drosophila melanogaster, GI21358573, Length=261, Percent_Identity=29.5019157088123, Blast_Score=100, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34959; Mature: 34959

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVAPTTAPTAAPVADDLHERLYGRRPPLPASQRKLKVGTTLFMLAMHVGAVFALLPRFW
CEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SWQGLVAFGVLYWMTVLGVTLGLHRLMAHRSFEAPKWLERVLVVMGTLGCQGGPVEWVGL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEC
HRHHHKFSDQPNDHHDAGRGLWWSHSEWMLHSIPALKHLDRFAGDMRRDPFYNWLDRFFL
HHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LLQLPLGAALYWIGENTGVHGGGLGLVLWAIPLRLTVVYHVTWLVNSATHVWGYRNFDCP
HHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCC
DRSTNCWWVAILSFGEGWHNNHHAFPHSARHGLRWFEFDITWQHIRALKSLGLAKRIRLA
CCCCCEEEEEEEECCCCCCCCCCCCCCHHHCCCEEEEECCCHHHHHHHHHHCHHHHHHHH
HYRP
CCCC
>Mature Secondary Structure
MVVAPTTAPTAAPVADDLHERLYGRRPPLPASQRKLKVGTTLFMLAMHVGAVFALLPRFW
CEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SWQGLVAFGVLYWMTVLGVTLGLHRLMAHRSFEAPKWLERVLVVMGTLGCQGGPVEWVGL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEC
HRHHHKFSDQPNDHHDAGRGLWWSHSEWMLHSIPALKHLDRFAGDMRRDPFYNWLDRFFL
HHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LLQLPLGAALYWIGENTGVHGGGLGLVLWAIPLRLTVVYHVTWLVNSATHVWGYRNFDCP
HHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCC
DRSTNCWWVAILSFGEGWHNNHHAFPHSARHGLRWFEFDITWQHIRALKSLGLAKRIRLA
CCCCCEEEEEEEECCCCCCCCCCCCCCHHHCCCEEEEECCCHHHHHHHHHHCHHHHHHHH
HYRP
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA