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The map label for this gene is 148243494

Identifier: 148243494

GI number: 148243494

Start: 2091372

End: 2092274

Strand: Direct

Name: 148243494

Synonym: SynRCC307_2395

Alternate gene names: NA

Gene position: 2091372-2092274 (Clockwise)

Preceding gene: 148243492

Following gene: 148243495

Centisome position: 94.0

GC content: 65.01

Gene sequence:

>903_bases
ATGACCGTCGCTATTCCAGCGGCAACCATCTCAGCACCAGCCCGCTCGGCTGTGTTGAGTGCGCCGCACCCTGACAAGTC
CACCCACTGCGATGGTCCCGGCCGCCGTTGGGGCACTGTTGGCTTTATGGCCGGCATCCACATCCTTGCTGTGGTGGCAC
TTCTGCCCATGTTCTGGAGCTGGCAGGCCGTCACCAGCCTGGCGGTTCTCTACTGGGTCACCGCCTGCCTGGGCGTGACC
ATCGGCTACCACCGCCTGCTCTGCCACCGCTCCTTCCGCCTACCCCAATGGCTGGAGCGCTTCTTTGCCACCTGCGGCGC
CCTGAGCTGCCAGCACGGGCCGATCGACTGGGTTGGCCTACACCGCCACCACCACAAGTTCTCTGATACGGATGCTGATC
ATCACAACAGCAACCGCGGCTTCTGGTGGAGCCACATGGGCTGGATGTTCGAGGAAATCCCCGCCATGGGCGCGGTGCCC
CGCTTCTCAGCCGATCTGGCCAAAGACCCCTACTACCGCTGGTTGAACAACAACTTCTTGCTGCTGCAGCTGCCCTTGGC
TGGCCTGCTGTTCTTAATCGGCAGCCTCACTGGCGCCGGCGGCTGGGCCCTGGTGCTCTGGGGCATCCCCCTGCGCCTGG
TGCTCGTCTATCACGTGACCTGGCTGGTGAACTCGGCCACCCACTGCTGGGGCGAAGCCGTCCATGAGAGCGGTGACAAG
TCACGCAACAACCCCTGGGTGGCGGCTCTGACCTTCGGCGAGGGCTGGCACAACAACCACCACGCCTTCCCCCACTCGGC
CAAGCACGGCCTGGAGCCAGGTCAGATCGATCTCACCTGGCAGCACATCCGGCTGATGCGCGCCCTCGGCCTGGCCAAGC
AAGTCCGCCTGCCGGCGGGCTGA

Upstream 100 bases:

>100_bases
ATTCACTTTGCCCAGAGTAAGGGCGGTAATCCCAACCCGCATAGCTATGCAATATGGATTCGTATTGTTATTGTTGGCTC
ATTGATACGGAATCAGTCCA

Downstream 100 bases:

>100_bases
GGCTCAGGCCAGGAAGGTAAGATCAACGGCTGGCCTTTTGGCAGTCGAATAGCACCCGGATTCACCCATGGCGAAGCGCG
TACAAGTTGTTCTCAGCGAA

Product: Fatty-acid desaturase

Products: NA

Alternate protein names: Fatty Acid Desaturase; Delta-9 Acyl-Phospholipid Desaturase; Fatty-Acid Desaturase; Delta-9 Desaturase; Acyl-CoA Desaturase; Delta 9 Acyl-Lipid Fatty Acid Desaturase; Fatty Acid Desaturase Subfamily; Fatty Acid Desaturase Family Protein; Fatty Acid Desaturase Domain Protein; Fatty Acid Desaturase Family Proteiin; Stearoyl-CoA Desaturase; Palmitoyl-Monogalactosyldiacylglycerol Delta-7 Desaturase; Delta-9 Acyl-Lipid Desaturase; Delta 9 Acyl-Lipid Desaturase; Stearoyl/Acyl-CoA Desaturase; Fatty Acid Desaturase Protein; Membrane-Bound Fatty Acid Desaturase; Long Chain Acyl-CoA Desaturase; Delta-9 Fatty Acid Desaturase; Fatty-Acid Desaturase Transmenbrane Protein; Delta-9 Fatty Ac Id Desaturase; Fatty Acid-CoA Desaturase; Acyl-Coa Desaturase; Delta-9-Acyl-Lipid Fatty Acid Desaturase; Syn-2 Delta 9 Acyl-Lipid Fatty Acid Desaturase; Desaturase-Like

Number of amino acids: Translated: 300; Mature: 299

Protein sequence:

>300_residues
MTVAIPAATISAPARSAVLSAPHPDKSTHCDGPGRRWGTVGFMAGIHILAVVALLPMFWSWQAVTSLAVLYWVTACLGVT
IGYHRLLCHRSFRLPQWLERFFATCGALSCQHGPIDWVGLHRHHHKFSDTDADHHNSNRGFWWSHMGWMFEEIPAMGAVP
RFSADLAKDPYYRWLNNNFLLLQLPLAGLLFLIGSLTGAGGWALVLWGIPLRLVLVYHVTWLVNSATHCWGEAVHESGDK
SRNNPWVAALTFGEGWHNNHHAFPHSAKHGLEPGQIDLTWQHIRLMRALGLAKQVRLPAG

Sequences:

>Translated_300_residues
MTVAIPAATISAPARSAVLSAPHPDKSTHCDGPGRRWGTVGFMAGIHILAVVALLPMFWSWQAVTSLAVLYWVTACLGVT
IGYHRLLCHRSFRLPQWLERFFATCGALSCQHGPIDWVGLHRHHHKFSDTDADHHNSNRGFWWSHMGWMFEEIPAMGAVP
RFSADLAKDPYYRWLNNNFLLLQLPLAGLLFLIGSLTGAGGWALVLWGIPLRLVLVYHVTWLVNSATHCWGEAVHESGDK
SRNNPWVAALTFGEGWHNNHHAFPHSAKHGLEPGQIDLTWQHIRLMRALGLAKQVRLPAG
>Mature_299_residues
TVAIPAATISAPARSAVLSAPHPDKSTHCDGPGRRWGTVGFMAGIHILAVVALLPMFWSWQAVTSLAVLYWVTACLGVTI
GYHRLLCHRSFRLPQWLERFFATCGALSCQHGPIDWVGLHRHHHKFSDTDADHHNSNRGFWWSHMGWMFEEIPAMGAVPR
FSADLAKDPYYRWLNNNFLLLQLPLAGLLFLIGSLTGAGGWALVLWGIPLRLVLVYHVTWLVNSATHCWGEAVHESGDKS
RNNPWVAALTFGEGWHNNHHAFPHSAKHGLEPGQIDLTWQHIRLMRALGLAKQVRLPAG

Specific function: Unknown

COG id: COG1398

COG function: function code I; Fatty-acid desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI148596961, Length=237, Percent_Identity=33.7552742616034, Blast_Score=128, Evalue=6e-30,
Organism=Homo sapiens, GI53759151, Length=292, Percent_Identity=29.7945205479452, Blast_Score=121, Evalue=7e-28,
Organism=Homo sapiens, GI148596938, Length=146, Percent_Identity=36.3013698630137, Blast_Score=88, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17561774, Length=243, Percent_Identity=30.8641975308642, Blast_Score=114, Evalue=6e-26,
Organism=Caenorhabditis elegans, GI17561776, Length=241, Percent_Identity=30.2904564315353, Blast_Score=114, Evalue=6e-26,
Organism=Caenorhabditis elegans, GI17540878, Length=239, Percent_Identity=30.9623430962343, Blast_Score=107, Evalue=8e-24,
Organism=Saccharomyces cerevisiae, GI6321383, Length=237, Percent_Identity=30.8016877637131, Blast_Score=111, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24646500, Length=276, Percent_Identity=31.5217391304348, Blast_Score=131, Evalue=7e-31,
Organism=Drosophila melanogaster, GI24646295, Length=275, Percent_Identity=33.0909090909091, Blast_Score=122, Evalue=4e-28,
Organism=Drosophila melanogaster, GI24646303, Length=273, Percent_Identity=32.967032967033, Blast_Score=121, Evalue=7e-28,
Organism=Drosophila melanogaster, GI24646299, Length=273, Percent_Identity=32.967032967033, Blast_Score=121, Evalue=7e-28,
Organism=Drosophila melanogaster, GI24646305, Length=273, Percent_Identity=32.967032967033, Blast_Score=121, Evalue=7e-28,
Organism=Drosophila melanogaster, GI24646301, Length=273, Percent_Identity=32.967032967033, Blast_Score=121, Evalue=7e-28,
Organism=Drosophila melanogaster, GI24646297, Length=273, Percent_Identity=32.967032967033, Blast_Score=121, Evalue=7e-28,
Organism=Drosophila melanogaster, GI21358571, Length=237, Percent_Identity=34.5991561181435, Blast_Score=120, Evalue=1e-27,
Organism=Drosophila melanogaster, GI21358573, Length=274, Percent_Identity=32.8467153284672, Blast_Score=113, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24662393, Length=288, Percent_Identity=30.2083333333333, Blast_Score=102, Evalue=3e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33505; Mature: 33374

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVAIPAATISAPARSAVLSAPHPDKSTHCDGPGRRWGTVGFMAGIHILAVVALLPMFWS
CEEEECCHHHCCCHHHHEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
WQAVTSLAVLYWVTACLGVTIGYHRLLCHRSFRLPQWLERFFATCGALSCQHGPIDWVGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCEEEC
HRHHHKFSDTDADHHNSNRGFWWSHMGWMFEEIPAMGAVPRFSADLAKDPYYRWLNNNFL
HHHHCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHCCCEE
LLQLPLAGLLFLIGSLTGAGGWALVLWGIPLRLVLVYHVTWLVNSATHCWGEAVHESGDK
EEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SRNNPWVAALTFGEGWHNNHHAFPHSAKHGLEPGQIDLTWQHIRLMRALGLAKQVRLPAG
CCCCCEEEEEEECCCCCCCCCCCCCCHHCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TVAIPAATISAPARSAVLSAPHPDKSTHCDGPGRRWGTVGFMAGIHILAVVALLPMFWS
EEEECCHHHCCCHHHHEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
WQAVTSLAVLYWVTACLGVTIGYHRLLCHRSFRLPQWLERFFATCGALSCQHGPIDWVGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCEEEC
HRHHHKFSDTDADHHNSNRGFWWSHMGWMFEEIPAMGAVPRFSADLAKDPYYRWLNNNFL
HHHHCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHCCCEE
LLQLPLAGLLFLIGSLTGAGGWALVLWGIPLRLVLVYHVTWLVNSATHCWGEAVHESGDK
EEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SRNNPWVAALTFGEGWHNNHHAFPHSAKHGLEPGQIDLTWQHIRLMRALGLAKQVRLPAG
CCCCCEEEEEEECCCCCCCCCCCCCCHHCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA