Click here to switch to the map view.

The map label for this gene is 148243448

Identifier: 148243448

GI number: 148243448

Start: 2043461

End: 2044312

Strand: Direct

Name: 148243448

Synonym: SynRCC307_2349

Alternate gene names: NA

Gene position: 2043461-2044312 (Clockwise)

Preceding gene: 148243445

Following gene: 148243462

Centisome position: 91.84

GC content: 64.2

Gene sequence:

>852_bases
GTGGCGGAACTTGTGCCATCGCCCCATGGTGACCCAGCTCTAGGACCGATAAAACGGAGCAGCAACACAATCCCCATGCT
GCGGCCCCTGGCCACCCTGTTGCTGCTGGCAACACCCATCGCCGCAGCCGAGCTGCAGGATCTGCAGCAGCTCCTGGAAG
ACAAGAGCTGCCAAGGCTGCGAGCTCAACGATGCCGATTTGGTGCATGCCGAGCTCAGCGGCGCACAGTTGCAACAGGCC
CAACTACGGGGGGCCAACTTGAGCCGGGCGACGCTGCGCGGAGCCGATCTGCGGGATGCCGATTTGCGCCAGGCGGTGTT
GCTGGGAGCCGACCTCAGCCGCGCTGATCTGCGCGGTGCCCAACTCAGCGGCAGTGACCTACGCCAAAGCGATCTGACTG
GCGCCAAGTTGGATCCTGGCGCCCTCAGCACGAGCCACTGGCAAGGAGCGCAAGGGGTTCCAGCAGGGGCCAATAGCTAT
GCCGATCTCCACAACAGTGGCGTGGAAGAGGCGCTGAAAGGTCGTCATCCAGAAGCAGAACAGCGCTTTAGTGCCGCCAT
CGGCCGGCGACCCCAAGCAGCCATCAGCTGGCTCGCCCGCGGTATCGCCCGCGGCGAACAGGGCCGTGAACTGGAGGCCG
CTGCGGATCTACAGCAGGCCGGCCGTCTCTACCGCCAAGGAGGCAACGACGATCTAGCCGATCAGCTGGACAAGGCGGCC
CAGCAGCTGCGCGACAACCCCAAAAAGCCCAATGGCAATGGCTGGGGCAGCGCGATCTTGGGCGGTGCGGCAGGACTGTT
TAAGCAGCTGGCTCCTTACGCCCTGAAGTTGATGGGGCCGGGTCTTCTTTAG

Upstream 100 bases:

>100_bases
GCCGGTGGCGCAAAGGGCACCAACGAGGCGCTGAAATCCAACACCTGCTCTGGGGCGCAGCCCAGGCGCAACGCTGCTTG
CTGCAGGTTGCCGCCATGGC

Downstream 100 bases:

>100_bases
GGGCGCGGCTGTAAACGCTCAAGTTGAACTTGAGGACGGTGGGCTCGGCCGAATCCTCACCATCTCCAGCGGGGGCCGGG
TGCGAGAGATTCAGATCCCT

Product: pentapeptide repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 282

Protein sequence:

>283_residues
MAELVPSPHGDPALGPIKRSSNTIPMLRPLATLLLLATPIAAAELQDLQQLLEDKSCQGCELNDADLVHAELSGAQLQQA
QLRGANLSRATLRGADLRDADLRQAVLLGADLSRADLRGAQLSGSDLRQSDLTGAKLDPGALSTSHWQGAQGVPAGANSY
ADLHNSGVEEALKGRHPEAEQRFSAAIGRRPQAAISWLARGIARGEQGRELEAAADLQQAGRLYRQGGNDDLADQLDKAA
QQLRDNPKKPNGNGWGSAILGGAAGLFKQLAPYALKLMGPGLL

Sequences:

>Translated_283_residues
MAELVPSPHGDPALGPIKRSSNTIPMLRPLATLLLLATPIAAAELQDLQQLLEDKSCQGCELNDADLVHAELSGAQLQQA
QLRGANLSRATLRGADLRDADLRQAVLLGADLSRADLRGAQLSGSDLRQSDLTGAKLDPGALSTSHWQGAQGVPAGANSY
ADLHNSGVEEALKGRHPEAEQRFSAAIGRRPQAAISWLARGIARGEQGRELEAAADLQQAGRLYRQGGNDDLADQLDKAA
QQLRDNPKKPNGNGWGSAILGGAAGLFKQLAPYALKLMGPGLL
>Mature_282_residues
AELVPSPHGDPALGPIKRSSNTIPMLRPLATLLLLATPIAAAELQDLQQLLEDKSCQGCELNDADLVHAELSGAQLQQAQ
LRGANLSRATLRGADLRDADLRQAVLLGADLSRADLRGAQLSGSDLRQSDLTGAKLDPGALSTSHWQGAQGVPAGANSYA
DLHNSGVEEALKGRHPEAEQRFSAAIGRRPQAAISWLARGIARGEQGRELEAAADLQQAGRLYRQGGNDDLADQLDKAAQ
QLRDNPKKPNGNGWGSAILGGAAGLFKQLAPYALKLMGPGLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 pentapeptide repeat domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 29753; Mature: 29622

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAELVPSPHGDPALGPIKRSSNTIPMLRPLATLLLLATPIAAAELQDLQQLLEDKSCQGC
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCC
ELNDADLVHAELSGAQLQQAQLRGANLSRATLRGADLRDADLRQAVLLGADLSRADLRGA
CCCCCHHHHHHHCCHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHHHCCCCCHHHCCCC
QLSGSDLRQSDLTGAKLDPGALSTSHWQGAQGVPAGANSYADLHNSGVEEALKGRHPEAE
CCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHCCCCCHH
QRFSAAIGRRPQAAISWLARGIARGEQGRELEAAADLQQAGRLYRQGGNDDLADQLDKAA
HHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
QQLRDNPKKPNGNGWGSAILGGAAGLFKQLAPYALKLMGPGLL
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AELVPSPHGDPALGPIKRSSNTIPMLRPLATLLLLATPIAAAELQDLQQLLEDKSCQGC
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCC
ELNDADLVHAELSGAQLQQAQLRGANLSRATLRGADLRDADLRQAVLLGADLSRADLRGA
CCCCCHHHHHHHCCHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHHHCCCCCHHHCCCC
QLSGSDLRQSDLTGAKLDPGALSTSHWQGAQGVPAGANSYADLHNSGVEEALKGRHPEAE
CCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHCCCCCHH
QRFSAAIGRRPQAAISWLARGIARGEQGRELEAAADLQQAGRLYRQGGNDDLADQLDKAA
HHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
QQLRDNPKKPNGNGWGSAILGGAAGLFKQLAPYALKLMGPGLL
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]