| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148243413
Identifier: 148243413
GI number: 148243413
Start: 2013042
End: 2013410
Strand: Direct
Name: 148243413
Synonym: SynRCC307_2314
Alternate gene names: NA
Gene position: 2013042-2013410 (Clockwise)
Preceding gene: 148243411
Following gene: 148243415
Centisome position: 90.48
GC content: 59.62
Gene sequence:
>369_bases ATGTCGAAAAAGCGCAAGCGCATCAGCCGTCGTCGTCTAGCTGGTCAACGCGTTCTGGCCCACGTTCCAACCCACAACCT CGATACCGGCGAGCACAAGCCCGTGACCGCCGCCCGTCGCTACATCGCCAAATCCAATCTGGTGCCGCCGGCTCTGGTGA ATGTGCGCCGCAACGAGCACACCACCGACCGCTTCTTCTGGGGCGAGAAAGGTCTGTTCAGCGCTCAATACGCCGAAGAA AACCACTTCCTCTTCCCGTCCCTGCGCACGATCGTTGATTCCGTGGGCGAAGACACCATCTTTGCTGGCCTGGAAGCCAC CTCCGACGACTGGGAGGAGATGGAGGAGTACGAGTACGCCTTCGTTTAA
Upstream 100 bases:
>100_bases GGTTTACCTGCGCCTTTAAGAGCCGGCTCCGGTGTCGTTTTGCGACTCCGGTCGACTTGTTTTGTCCGATCCACAGCCCA CCCCGTAAGGGGTTCTTTCC
Downstream 100 bases:
>100_bases GCCACTGGCTTAAAGGGCCGCCAAAAATTGGGCGGCCCGCTCCACGGCGTCAATCGGAATCGTGTGGCCGCCTGTGAAGG TCAACACCTCCACCTGGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MSKKRKRISRRRLAGQRVLAHVPTHNLDTGEHKPVTAARRYIAKSNLVPPALVNVRRNEHTTDRFFWGEKGLFSAQYAEE NHFLFPSLRTIVDSVGEDTIFAGLEATSDDWEEMEEYEYAFV
Sequences:
>Translated_122_residues MSKKRKRISRRRLAGQRVLAHVPTHNLDTGEHKPVTAARRYIAKSNLVPPALVNVRRNEHTTDRFFWGEKGLFSAQYAEE NHFLFPSLRTIVDSVGEDTIFAGLEATSDDWEEMEEYEYAFV >Mature_121_residues SKKRKRISRRRLAGQRVLAHVPTHNLDTGEHKPVTAARRYIAKSNLVPPALVNVRRNEHTTDRFFWGEKGLFSAQYAEEN HFLFPSLRTIVDSVGEDTIFAGLEATSDDWEEMEEYEYAFV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14123; Mature: 13992
Theoretical pI: Translated: 7.90; Mature: 7.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKRKRISRRRLAGQRVLAHVPTHNLDTGEHKPVTAARRYIAKSNLVPPALVNVRRNEH CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHCCCCCC TTDRFFWGEKGLFSAQYAEENHFLFPSLRTIVDSVGEDTIFAGLEATSDDWEEMEEYEYA CCCCEECCCCCCCCCCCCCCCCEECHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHC FV CC >Mature Secondary Structure SKKRKRISRRRLAGQRVLAHVPTHNLDTGEHKPVTAARRYIAKSNLVPPALVNVRRNEH CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHCCCCCC TTDRFFWGEKGLFSAQYAEENHFLFPSLRTIVDSVGEDTIFAGLEATSDDWEEMEEYEYA CCCCEECCCCCCCCCCCCCCCCEECHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHC FV CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA