| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is purH [H]
Identifier: 148243415
GI number: 148243415
Start: 2014031
End: 2015593
Strand: Direct
Name: purH [H]
Synonym: SynRCC307_2316
Alternate gene names: 148243415
Gene position: 2014031-2015593 (Clockwise)
Preceding gene: 148243413
Following gene: 148243416
Centisome position: 90.52
GC content: 65.26
Gene sequence:
>1563_bases TTGGCTGTCCCTGCGATCTCCATGGCCCGTCTGGCTCTGCTGAGTGTGTCGAACAAAGAGGGGATTGAACCTCTGGCCCG GGCCCTGGTGGAACGCCATGGTTTCCAGCTGCTCTCCAGCGGCGGCACCGCGAAATGTCTGGCGGATGCAGGGCTGCCTG TCACCAAGGTGGCAGAGCACACCGGTGCCCCAGAAATCCTGGGGGGTCGCGTCAAAACCCTGCACCCGCGCATCCATGGC GGCATCTTGGGCCGCCCCAGCGACGCGGCCGACCAGGCCGACATGGAGGCCCAGAACATCCCCGCGATCGAGCTGGTGGT GGTGAATCTTTACCCGTTTGAAGCCACCATCGCCAAGGCCGATGTGAGCTGGGATGAGGCCATCGAGAAGATCGACATCG GCGGACCGGCCATGGTGCGGGCTGCCGCCAAAAACCATGCCCACGTCAGCGTTTTAACCAGCCCGACCCAATACGAGCGA CTGCTTGGTGCTCTCGACGCCGGGCCCATCCCTGCCGAGCTGCGGCGTCAGCTCGCACTGGAAGCCTTCCAGCACACCGC CGCCTACGACAGCGCCATCAGCACTTGGCTGGGCACCCAGTTGGAAGCCAATGCCCCAAGCCCCCACACCTTGGCGGTGA CGCTGCCGCAGCGGCAAACCTTGCGCTACGGAGAAAACCCCCATCAAGCGGCGGCTTGGTACAGCAGCTCAGCGGGATGG GGCGGTGCCCAGCAACTGCAGGGCAAAGAGCTCAGCTACAACAACCTGCTCGATCTCGATGCGGCCCAAGCCACGGTGGA GCGCTTCCCCGCCAGCGAAGGGGCAGCCGCTGTGGTGATCAAACACACCAACCCCTGCGGCGTCGCCACAGGGCGCGATG CCAGCGATGCCCTGGCCAGGGCCATTGCCGCTGATCCCGTCTCAGCCTTCGGCGGCATCGTGGCCCTCAATCAACCCCTC GACGGGGCGGCCTGCGCCAGCCTGCAGGGCCTCTTCCTCGAATGCATCGTGGCGCCGGAGATCAGCGCCGAAGCACGCGA GATCCTCTCCAGCAAAAGCAATCTGCGGCTGCTGGAACTGCCAGCAGCGGCCTCAGCAGCAGCCACCCGGCAGCAATTGC GCTCGGTCTTAGGCGGCGTGCTGCTGCAAGAACGCGATCAGATCAGCGACGACGACAGCGCCTGGCAGGTGGTGAGCCAA CGCCAACCCGATGCCGAAGAGATGGCTGATCTGCGCTTTGCTTGGCGTGTGGTGCGCCATGTGCGCTCCAACGCGATCGT GGTGGCCAAAGCCGGGCAAAGCCTGGGCGTTGGCGCCGGTCAAATGAATCGTGTGGGTTCAGCAGGCATTGCCCTCGATG CCGCCGGTGATCAAGCCCGTGGCGCCGTTCTCGCCAGCGATGGCTTCTTCCCCTTCGATGACACCGTCAAGCTGGCCGCT GAGCGGGGCATCCGCGCGGTGATCCAACCCGGAGGCAGCAAGCGCGACAGCGACTCGATTGCCGCCTGTGATGCCGCTGG GCTGGTGATGGTGACCACGGGCCGTCGCCATTTCCTGCACTGA
Upstream 100 bases:
>100_bases CCTAAGGGCAGCAGGTCAGCGGCATTGGCCCCCCAGCCGTGCAGAAAGATCAAGCGCATCAACCAGCAACAGCGTCAGGA CCACCCCATACCATCAGAGA
Downstream 100 bases:
>100_bases AGCGGAATCAGGCGACCCAGTAGCGTCGCTCCCATCGCACGCTGAGCCGATGCCCGAGGCCCTGCTTTTCAATCTGAACT TCCTGCATCCTCTGCTGATG
Product: bifunctional phospho ribosylaminoimidazole carboxamide formyltransferase/IMP cyclohydrolase
Products: NA
Alternate protein names: Phosphoribosylaminoimidazolecarboxamide formyltransferase; AICAR transformylase; IMP cyclohydrolase; ATIC; IMP synthase; Inosinicase [H]
Number of amino acids: Translated: 520; Mature: 519
Protein sequence:
>520_residues MAVPAISMARLALLSVSNKEGIEPLARALVERHGFQLLSSGGTAKCLADAGLPVTKVAEHTGAPEILGGRVKTLHPRIHG GILGRPSDAADQADMEAQNIPAIELVVVNLYPFEATIAKADVSWDEAIEKIDIGGPAMVRAAAKNHAHVSVLTSPTQYER LLGALDAGPIPAELRRQLALEAFQHTAAYDSAISTWLGTQLEANAPSPHTLAVTLPQRQTLRYGENPHQAAAWYSSSAGW GGAQQLQGKELSYNNLLDLDAAQATVERFPASEGAAAVVIKHTNPCGVATGRDASDALARAIAADPVSAFGGIVALNQPL DGAACASLQGLFLECIVAPEISAEAREILSSKSNLRLLELPAAASAAATRQQLRSVLGGVLLQERDQISDDDSAWQVVSQ RQPDAEEMADLRFAWRVVRHVRSNAIVVAKAGQSLGVGAGQMNRVGSAGIALDAAGDQARGAVLASDGFFPFDDTVKLAA ERGIRAVIQPGGSKRDSDSIAACDAAGLVMVTTGRRHFLH
Sequences:
>Translated_520_residues MAVPAISMARLALLSVSNKEGIEPLARALVERHGFQLLSSGGTAKCLADAGLPVTKVAEHTGAPEILGGRVKTLHPRIHG GILGRPSDAADQADMEAQNIPAIELVVVNLYPFEATIAKADVSWDEAIEKIDIGGPAMVRAAAKNHAHVSVLTSPTQYER LLGALDAGPIPAELRRQLALEAFQHTAAYDSAISTWLGTQLEANAPSPHTLAVTLPQRQTLRYGENPHQAAAWYSSSAGW GGAQQLQGKELSYNNLLDLDAAQATVERFPASEGAAAVVIKHTNPCGVATGRDASDALARAIAADPVSAFGGIVALNQPL DGAACASLQGLFLECIVAPEISAEAREILSSKSNLRLLELPAAASAAATRQQLRSVLGGVLLQERDQISDDDSAWQVVSQ RQPDAEEMADLRFAWRVVRHVRSNAIVVAKAGQSLGVGAGQMNRVGSAGIALDAAGDQARGAVLASDGFFPFDDTVKLAA ERGIRAVIQPGGSKRDSDSIAACDAAGLVMVTTGRRHFLH >Mature_519_residues AVPAISMARLALLSVSNKEGIEPLARALVERHGFQLLSSGGTAKCLADAGLPVTKVAEHTGAPEILGGRVKTLHPRIHGG ILGRPSDAADQADMEAQNIPAIELVVVNLYPFEATIAKADVSWDEAIEKIDIGGPAMVRAAAKNHAHVSVLTSPTQYERL LGALDAGPIPAELRRQLALEAFQHTAAYDSAISTWLGTQLEANAPSPHTLAVTLPQRQTLRYGENPHQAAAWYSSSAGWG GAQQLQGKELSYNNLLDLDAAQATVERFPASEGAAAVVIKHTNPCGVATGRDASDALARAIAADPVSAFGGIVALNQPLD GAACASLQGLFLECIVAPEISAEAREILSSKSNLRLLELPAAASAAATRQQLRSVLGGVLLQERDQISDDDSAWQVVSQR QPDAEEMADLRFAWRVVRHVRSNAIVVAKAGQSLGVGAGQMNRVGSAGIALDAAGDQARGAVLASDGFFPFDDTVKLAAE RGIRAVIQPGGSKRDSDSIAACDAAGLVMVTTGRRHFLH
Specific function: De novo purine biosynthesis; ninth step. De novo purine biosynthesis; tenth step. [C]
COG id: COG0138
COG function: function code F; AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purH family [H]
Homologues:
Organism=Homo sapiens, GI20127454, Length=473, Percent_Identity=38.2663847780127, Blast_Score=248, Evalue=7e-66, Organism=Escherichia coli, GI1790439, Length=529, Percent_Identity=46.3137996219282, Blast_Score=437, Evalue=1e-124, Organism=Caenorhabditis elegans, GI71985564, Length=474, Percent_Identity=34.5991561181435, Blast_Score=245, Evalue=3e-65, Organism=Caenorhabditis elegans, GI71985574, Length=304, Percent_Identity=25.6578947368421, Blast_Score=82, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6323768, Length=476, Percent_Identity=38.0252100840336, Blast_Score=264, Evalue=2e-71, Organism=Saccharomyces cerevisiae, GI6323056, Length=479, Percent_Identity=37.3695198329854, Blast_Score=261, Evalue=2e-70, Organism=Drosophila melanogaster, GI24649832, Length=470, Percent_Identity=38.7234042553192, Blast_Score=256, Evalue=3e-68,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 640 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002695 - InterPro: IPR013982 - InterPro: IPR016193 - InterPro: IPR011607 [H]
Pfam domain/function: PF01808 AICARFT_IMPCHas; PF02142 MGS [H]
EC number: =2.1.2.3; =3.5.4.10 [H]
Molecular weight: Translated: 54439; Mature: 54308
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVPAISMARLALLSVSNKEGIEPLARALVERHGFQLLSSGGTAKCLADAGLPVTKVAEH CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCHHEECCCCCEEEHHCCCCCHHHHHHH TGAPEILGGRVKTLHPRIHGGILGRPSDAADQADMEAQNIPAIELVVVNLYPFEATIAKA CCCCHHHCCCCEEECCHHCCCCCCCCCCCCCHHCCHHCCCCEEEEEEEEEECCCEEEEEC DVSWDEAIEKIDIGGPAMVRAAAKNHAHVSVLTSPTQYERLLGALDAGPIPAELRRQLAL CCCHHHHHHHCCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCCCHHHHHHHHH EAFQHTAAYDSAISTWLGTQLEANAPSPHTLAVTLPQRQTLRYGENPHQAAAWYSSSAGW HHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEEECCCHHHHHCCCCCCHHHHEECCCCCC GGAQQLQGKELSYNNLLDLDAAQATVERFPASEGAAAVVIKHTNPCGVATGRDASDALAR CCHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHH AIAADPVSAFGGIVALNQPLDGAACASLQGLFLECIVAPEISAEAREILSSKSNLRLLEL HHHCCCHHHHCCEEEECCCCCCHHHHHHHHHHHHEEECCCCCHHHHHHHCCCCCCEEEEC PAAASAAATRQQLRSVLGGVLLQERDQISDDDSAWQVVSQRQPDAEEMADLRFAWRVVRH CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHH VRSNAIVVAKAGQSLGVGAGQMNRVGSAGIALDAAGDQARGAVLASDGFFPFDDTVKLAA HCCCEEEEEECCCCCCCCCCHHHCCCCCCEEEECCCCCCCCEEEECCCCCCCCHHHHHHH ERGIRAVIQPGGSKRDSDSIAACDAAGLVMVTTGRRHFLH HCCCEEEECCCCCCCCCCCEEEECCCCEEEEECCCHHCCC >Mature Secondary Structure AVPAISMARLALLSVSNKEGIEPLARALVERHGFQLLSSGGTAKCLADAGLPVTKVAEH CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCHHEECCCCCEEEHHCCCCCHHHHHHH TGAPEILGGRVKTLHPRIHGGILGRPSDAADQADMEAQNIPAIELVVVNLYPFEATIAKA CCCCHHHCCCCEEECCHHCCCCCCCCCCCCCHHCCHHCCCCEEEEEEEEEECCCEEEEEC DVSWDEAIEKIDIGGPAMVRAAAKNHAHVSVLTSPTQYERLLGALDAGPIPAELRRQLAL CCCHHHHHHHCCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCCCHHHHHHHHH EAFQHTAAYDSAISTWLGTQLEANAPSPHTLAVTLPQRQTLRYGENPHQAAAWYSSSAGW HHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEEECCCHHHHHCCCCCCHHHHEECCCCCC GGAQQLQGKELSYNNLLDLDAAQATVERFPASEGAAAVVIKHTNPCGVATGRDASDALAR CCHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHH AIAADPVSAFGGIVALNQPLDGAACASLQGLFLECIVAPEISAEAREILSSKSNLRLLEL HHHCCCHHHHCCEEEECCCCCCHHHHHHHHHHHHEEECCCCCHHHHHHHCCCCCCEEEEC PAAASAAATRQQLRSVLGGVLLQERDQISDDDSAWQVVSQRQPDAEEMADLRFAWRVVRH CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHH VRSNAIVVAKAGQSLGVGAGQMNRVGSAGIALDAAGDQARGAVLASDGFFPFDDTVKLAA HCCCEEEEEECCCCCCCCCCHHHCCCCCCEEEECCCCCCCCEEEECCCCCCCCHHHHHHH ERGIRAVIQPGGSKRDSDSIAACDAAGLVMVTTGRRHFLH HCCCEEEECCCCCCCCCCCEEEECCCCEEEEECCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA