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The map label for this gene is yrbE [H]

Identifier: 148243406

GI number: 148243406

Start: 2004486

End: 2005481

Strand: Direct

Name: yrbE [H]

Synonym: SynRCC307_2307

Alternate gene names: 148243406

Gene position: 2004486-2005481 (Clockwise)

Preceding gene: 148243405

Following gene: 148243408

Centisome position: 90.09

GC content: 63.76

Gene sequence:

>996_bases
ATGAAACCAGTCAAGGTGGGCGTGATCGGCATCGGCAACATGGGCTGGAATCACGCCCGTGTGCTGAGCCTGTTGCGCGA
TGCCGAGCTGGTGGGCGTTGCTGACCCCGATTCCGCCCGCGGCGCCTTAGCCACCGAACAGTTCGGTTGCCGCTGGTTTG
CTGACTACAACGACCTCATCGAGGAAGTGGAAGCGGTTTGCATTGCCGTGCCGACCCTGCTGCACCACCCGGTGGGCATG
GCCTGCCTCAAGGCCGGCGTGCATGTGCTGATCGAAAAGCCGATCGCGGCCAATGAGCAGGAAGCCGGAGAATTGATCGC
CGCAGCGGAGCAGGCTGGCCGCTTGCTGCAAGTGGGCCACATCGAGCGCTTCAACCCGGCCTTTCGGGAGCTGCTCAACG
TGGTGGCCAATGAAGAAGTGGTGGTGCTAGAAGGCCGGCGCCACAGCCCCCATGCCGATCGCGCCAACGATGTGTCGGTG
GTGCTGGATCTGATGATCCACGACATCGACTTGGCGCTGGAACTGTCAGGAGCTCCCGTGGTGGGATTCGCCGCGGCTGG
TGGCCGCAGCAGCGACGGCCCCATCGACTACGTCACCGCCACGTTGAACTTCGCCAATGGCGTTGCCGCCAGCCTCACCG
CCAGCAAGATGAGCCACCGCAAGGAGCGCTGCCTCACGGCCCACTGCCGCGACAGCCTGGTGGAGGCGGACTTCCTCAAC
CGCAACTTGCGCATCCACAGGCGCGCCCATGAGTCCTATTCCGCCACCCGGGGGGAACTGCTCTATCGCCACGACGGTTT
CATCGAAGAGGTGAGCATCTCCCCCACCGAACCGCTCTATGCCGAACTCGAGCATTTTCTGCAGTGCGTGCGTGGTGCGG
CCAAACCAGCCGTTGATGGTCTGCAAGCGTCCCGGGCTCTACGGCTGGCCGACCTGATTGAGCAGGCGGTTGAGCAGCCG
CAGCAGAGCTTGCTGCAGCTCGATACACCGCTCTAG

Upstream 100 bases:

>100_bases
CGAGGACGTGAAGATCTGCCTCGGAGAACGCAGCAATGCGTTGATAATGAGCCCCCAGCAGGACTAGTCCCCTGCCTGCA
ACACCGCCCAGCTCACCAGG

Downstream 100 bases:

>100_bases
GCCGCAATCGCGCTGTCCACCAATTGGTGCAAGGCCCCCACGCAAAGCTCACGGCAGCGGGTTGGTGAGGCCCGGTAGAA
GCCGTCCCAAGCAGCGGCCT

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MKPVKVGVIGIGNMGWNHARVLSLLRDAELVGVADPDSARGALATEQFGCRWFADYNDLIEEVEAVCIAVPTLLHHPVGM
ACLKAGVHVLIEKPIAANEQEAGELIAAAEQAGRLLQVGHIERFNPAFRELLNVVANEEVVVLEGRRHSPHADRANDVSV
VLDLMIHDIDLALELSGAPVVGFAAAGGRSSDGPIDYVTATLNFANGVAASLTASKMSHRKERCLTAHCRDSLVEADFLN
RNLRIHRRAHESYSATRGELLYRHDGFIEEVSISPTEPLYAELEHFLQCVRGAAKPAVDGLQASRALRLADLIEQAVEQP
QQSLLQLDTPL

Sequences:

>Translated_331_residues
MKPVKVGVIGIGNMGWNHARVLSLLRDAELVGVADPDSARGALATEQFGCRWFADYNDLIEEVEAVCIAVPTLLHHPVGM
ACLKAGVHVLIEKPIAANEQEAGELIAAAEQAGRLLQVGHIERFNPAFRELLNVVANEEVVVLEGRRHSPHADRANDVSV
VLDLMIHDIDLALELSGAPVVGFAAAGGRSSDGPIDYVTATLNFANGVAASLTASKMSHRKERCLTAHCRDSLVEADFLN
RNLRIHRRAHESYSATRGELLYRHDGFIEEVSISPTEPLYAELEHFLQCVRGAAKPAVDGLQASRALRLADLIEQAVEQP
QQSLLQLDTPL
>Mature_331_residues
MKPVKVGVIGIGNMGWNHARVLSLLRDAELVGVADPDSARGALATEQFGCRWFADYNDLIEEVEAVCIAVPTLLHHPVGM
ACLKAGVHVLIEKPIAANEQEAGELIAAAEQAGRLLQVGHIERFNPAFRELLNVVANEEVVVLEGRRHSPHADRANDVSV
VLDLMIHDIDLALELSGAPVVGFAAAGGRSSDGPIDYVTATLNFANGVAASLTASKMSHRKERCLTAHCRDSLVEADFLN
RNLRIHRRAHESYSATRGELLYRHDGFIEEVSISPTEPLYAELEHFLQCVRGAAKPAVDGLQASRALRLADLIEQAVEQP
QQSLLQLDTPL

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI1787307, Length=331, Percent_Identity=26.8882175226586, Blast_Score=72, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: NA

Molecular weight: Translated: 35939; Mature: 35939

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPVKVGVIGIGNMGWNHARVLSLLRDAELVGVADPDSARGALATEQFGCRWFADYNDLI
CCCEEEEEEEECCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHCCCEEECCHHHHH
EEVEAVCIAVPTLLHHPVGMACLKAGVHVLIEKPIAANEQEAGELIAAAEQAGRLLQVGH
HHHHHHHHHHHHHHHCCHHHHHHHHCHHEEEECCCCCCCHHHHHHHHHHHHCCCEEEECC
IERFNPAFRELLNVVANEEVVVLEGRRHSPHADRANDVSVVLDLMIHDIDLALELSGAPV
CHHCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCEEEEECCCCE
VGFAAAGGRSSDGPIDYVTATLNFANGVAASLTASKMSHRKERCLTAHCRDSLVEADFLN
EEEEECCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RNLRIHRRAHESYSATRGELLYRHDGFIEEVSISPTEPLYAELEHFLQCVRGAAKPAVDG
CCHHHHHHHHHHHCCCCCCEEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHH
LQASRALRLADLIEQAVEQPQQSLLQLDTPL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKPVKVGVIGIGNMGWNHARVLSLLRDAELVGVADPDSARGALATEQFGCRWFADYNDLI
CCCEEEEEEEECCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHCCCEEECCHHHHH
EEVEAVCIAVPTLLHHPVGMACLKAGVHVLIEKPIAANEQEAGELIAAAEQAGRLLQVGH
HHHHHHHHHHHHHHHCCHHHHHHHHCHHEEEECCCCCCCHHHHHHHHHHHHCCCEEEECC
IERFNPAFRELLNVVANEEVVVLEGRRHSPHADRANDVSVVLDLMIHDIDLALELSGAPV
CHHCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCEEEEECCCCE
VGFAAAGGRSSDGPIDYVTATLNFANGVAASLTASKMSHRKERCLTAHCRDSLVEADFLN
EEEEECCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RNLRIHRRAHESYSATRGELLYRHDGFIEEVSISPTEPLYAELEHFLQCVRGAAKPAVDG
CCHHHHHHHHHHHCCCCCCEEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHH
LQASRALRLADLIEQAVEQPQQSLLQLDTPL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 9025289 [H]