| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
Click here to switch to the map view.
The map label for this gene is tarA [H]
Identifier: 148243408
GI number: 148243408
Start: 2008619
End: 2009476
Strand: Direct
Name: tarA [H]
Synonym: SynRCC307_2309
Alternate gene names: 148243408
Gene position: 2008619-2009476 (Clockwise)
Preceding gene: 148243406
Following gene: 148243411
Centisome position: 90.28
GC content: 63.99
Gene sequence:
>858_bases TTGTTCCAGTGCCGGGCCAGCACTGGTCTGCGTTGTCAGGCTGGTCATCATCAATCAGATTCTCTCGCGTCAGCGGCTCT GCCCATGTCCCCAGCCCCTAGTCCCTGTGACCGCCAGCAGGTGCTCGGGATGCCGGTGGACGCCTGCCCCGATGTGCTGG CAGCGGCTGTGGAGCTGCACCGCAGCGGTGGCGGGCAACTGGTCACCCTCAATGCCGAGATGACGATGACGGCGCTGGCC CAGCCAGAGCTCGGGCAGGCGATTCGGGCCGCTGACCTCGTGATTCCCGATGGTGCAGGCGTGGTTTGGGCCTTGCGGCG CCAGGGCATTCGGGTGCGCCGCAGCCCTGGCATCGAACTGGCCCATGACCTGCTCGCCCATGCCGCCCAACACCACTGGC GCGTCGCCCTGGTGGGGGCGAGCCCGGCTGTGATGGAGCAGCTCACTCAGCAGCTCCCCCAACAGCACCCTGGCCTGCAG CTGGTCATGGCCGTGCATGGCTTTCAAGCACCCGAGGCATGGCCTGGGCTGGAACAGCAACTGCTGTCCCTCAAGCCTGA TCTGGTGCTAGCGGCGTTGGGGGTGCCGCGGCAGGAAACCTGGATCCAACGTCTGCATCACCACCAAGCAGGTCTATGGA TGGGCGTTGGCGGCAGTTTTGATGTGTGGTCAGGGCAAAAGAAAAGGGCCCCCCAATGGATGGGAGCCCTTCAAATTGAA TGGTTGTACCGATTGCTTCAGGAACCGAGCCGCTGGCGCCGCATGCTGGCCTTGCCGCAGTTTGCCTGGGCTGTAATCAG CGGAAACCCACCGAGGCCTGCCACACAAAGGCCAGAAGCAGGAAAAAGACCGGGATAA
Upstream 100 bases:
>100_bases TGCCATGCACCGTGTTGGCGGTGCTGGCCGGCATCAGGCCCGTGATCGGGTGCTGCCTGGCCAGGAAGACGCGGTCCACC TGGGCATCGAGGCGTTCCAG
Downstream 100 bases:
>100_bases GCGGAAGGATGTCCACGAGTGGGCCAAAGGCGCGGTAAGCCTCGGGAAGCTGGGCCAACAGAGGCAGTGCAGCGTTCACC ATCGTGGTCGAAAACCAAGC
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: N-acetylglucosaminyldiphospho-undecaprenol N-acetyl-beta-D-mannosaminyltransferase; UDP-N-acetylmannosamine transferase [H]
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MFQCRASTGLRCQAGHHQSDSLASAALPMSPAPSPCDRQQVLGMPVDACPDVLAAAVELHRSGGGQLVTLNAEMTMTALA QPELGQAIRAADLVIPDGAGVVWALRRQGIRVRRSPGIELAHDLLAHAAQHHWRVALVGASPAVMEQLTQQLPQQHPGLQ LVMAVHGFQAPEAWPGLEQQLLSLKPDLVLAALGVPRQETWIQRLHHHQAGLWMGVGGSFDVWSGQKKRAPQWMGALQIE WLYRLLQEPSRWRRMLALPQFAWAVISGNPPRPATQRPEAGKRPG
Sequences:
>Translated_285_residues MFQCRASTGLRCQAGHHQSDSLASAALPMSPAPSPCDRQQVLGMPVDACPDVLAAAVELHRSGGGQLVTLNAEMTMTALA QPELGQAIRAADLVIPDGAGVVWALRRQGIRVRRSPGIELAHDLLAHAAQHHWRVALVGASPAVMEQLTQQLPQQHPGLQ LVMAVHGFQAPEAWPGLEQQLLSLKPDLVLAALGVPRQETWIQRLHHHQAGLWMGVGGSFDVWSGQKKRAPQWMGALQIE WLYRLLQEPSRWRRMLALPQFAWAVISGNPPRPATQRPEAGKRPG >Mature_285_residues MFQCRASTGLRCQAGHHQSDSLASAALPMSPAPSPCDRQQVLGMPVDACPDVLAAAVELHRSGGGQLVTLNAEMTMTALA QPELGQAIRAADLVIPDGAGVVWALRRQGIRVRRSPGIELAHDLLAHAAQHHWRVALVGASPAVMEQLTQQLPQQHPGLQ LVMAVHGFQAPEAWPGLEQQLLSLKPDLVLAALGVPRQETWIQRLHHHQAGLWMGVGGSFDVWSGQKKRAPQWMGALQIE WLYRLLQEPSRWRRMLALPQFAWAVISGNPPRPATQRPEAGKRPG
Specific function: Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, a key lipid intermediate in the de novo synthesis of teichoic acid (Potential) [H]
COG id: COG1922
COG function: function code M; Teichoic acid biosynthesis proteins
Gene ontology:
Cell location: Secreted, cell wall [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 26 family [H]
Homologues:
Organism=Escherichia coli, GI2367289, Length=191, Percent_Identity=37.17277486911, Blast_Score=107, Evalue=9e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004629 [H]
Pfam domain/function: PF03808 Glyco_tran_WecB [H]
EC number: =2.4.1.187 [H]
Molecular weight: Translated: 31088; Mature: 31088
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFQCRASTGLRCQAGHHQSDSLASAALPMSPAPSPCDRQQVLGMPVDACPDVLAAAVELH CCEECCCCCCEECCCCCCCHHHHHHCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHH RSGGGQLVTLNAEMTMTALAQPELGQAIRAADLVIPDGAGVVWALRRQGIRVRRSPGIEL HCCCCEEEEEECCEEEHHHCCCHHHHHHHHHHEEECCCCCHHHHHHHCCEEEECCCCHHH AHDLLAHAAQHHWRVALVGASPAVMEQLTQQLPQQHPGLQLVMAVHGFQAPEAWPGLEQQ HHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEHHCCCCCCCCCCHHHH LLSLKPDLVLAALGVPRQETWIQRLHHHQAGLWMGVGGSFDVWSGQKKRAPQWMGALQIE HHHCCCCCEEHCCCCCCHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCHHHHHHHHHH WLYRLLQEPSRWRRMLALPQFAWAVISGNPPRPATQRPEAGKRPG HHHHHHHCHHHHHHHHHCHHHHEEEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure MFQCRASTGLRCQAGHHQSDSLASAALPMSPAPSPCDRQQVLGMPVDACPDVLAAAVELH CCEECCCCCCEECCCCCCCHHHHHHCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHH RSGGGQLVTLNAEMTMTALAQPELGQAIRAADLVIPDGAGVVWALRRQGIRVRRSPGIEL HCCCCEEEEEECCEEEHHHCCCHHHHHHHHHHEEECCCCCHHHHHHHCCEEEECCCCHHH AHDLLAHAAQHHWRVALVGASPAVMEQLTQQLPQQHPGLQLVMAVHGFQAPEAWPGLEQQ HHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEHHCCCCCCCCCCHHHH LLSLKPDLVLAALGVPRQETWIQRLHHHQAGLWMGVGGSFDVWSGQKKRAPQWMGALQIE HHHCCCCCEEHCCCCCCHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCHHHHHHHHHH WLYRLLQEPSRWRRMLALPQFAWAVISGNPPRPATQRPEAGKRPG HHHHHHHCHHHHHHHHHCHHHHEEEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11882717 [H]