| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is menA [H]
Identifier: 148243352
GI number: 148243352
Start: 1959102
End: 1960037
Strand: Direct
Name: menA [H]
Synonym: SynRCC307_2253
Alternate gene names: 148243352
Gene position: 1959102-1960037 (Clockwise)
Preceding gene: 148243350
Following gene: 148243353
Centisome position: 88.05
GC content: 65.92
Gene sequence:
>936_bases ATGGCTGAGCCCCAGGTCGTCGCAAGCCGTTACGCGCTCTGGAAGGCGGCCATCAAATGGCCGATGTACTCCGTGGCAGT GATGCCAGCGCTTTTGGCCAGTGGCTGGCTTCAAAGTCAGGGGTTAGACCCCCGCTGGGGCCAGCTCGGCCTGTTTCTGC TCGCAGCGGTGCTGCTGCTGGGGTGGGAAAACCTCAGCAACGACGTGTTTGATGACGACACCGGTGTCGACACCCTCGGC AAACCCCATTCCTTGGTGGCCCTGACCGGCCGCCGCGATCGCATTGCTTGGATTGCTCACAGCCTGCTCGCTGGCGGATT GCTGCTGATGGCCCTGGTGGCCCTGCGCAGCCAACCGGTGGTGCTGCTGCTAGTGCTGATCTGCTGCGGCCTGGGATACC TCTACCAAGGCCCACCCTTTCGTTTGGGCTACCGCGGCCTCGGCGAACCGCTGTGCTGGCTGGCCTTTGGCCCCTTCGCC ACGGCCGCTGCGCTGATGGCGCTGCAGCCACCAACGAGCCTGCCGGCTGCAGTGCCTTGGCAGGTGGCACTGAGCCTGGG CTCCGGCCCGGCGCTGGCCACCACCTTGGTGTTGTTCTGCTCCCACTTTCATCAGGTCGAGGAGGACGCTGCCCACGGCA AACGCTCTCCGGTTGTGAAGCTGGGCACGGCCAAAGCCGCGGCCGTGGTGCCCTGGCTTGTGGCGGCAAGCTTGGCCCTG CAATGGCTGCCGGTGCTGGAGCGCCAGTGGCCCTCCACCGCGCTGCTGAGCGTGATCGGGTTGCCCGCTGCAGCGCAGCT GATTCGGCTGCTGCGGGAGCATCACCACCAGCCCGAGCGGATTAGCGGCAGCAAGTTTTTGGCCTTGCGCTTTCAAGCCC TAAGCGGCCTCGGGCTCGCCATCGGCCTGGGCATTGCACCTTGGCTGGGACGTTGA
Upstream 100 bases:
>100_bases CTGGCTGAGCAAGTCGGTGAAGCGGGGGGCCTGTTGCACCACACAACCGGGGGACTGCTCAAATGTATGGGTCTCTCGTG GCCCGTAGTGGCGGGCAGCC
Downstream 100 bases:
>100_bases TGCAACTGCGCTGGCGCCCATACCGGTGGGCGCTGCAGCCGCCTTTGATCACCGCCTGCGGGCCCTGGAGCGAGCGGCGC GGCTGGCTGCTGCGGCTCGA
Product: 1,4-dihydroxy-2-naphthoate octaprenyltransferase
Products: NA
Alternate protein names: DHNA-octaprenyltransferase [H]
Number of amino acids: Translated: 311; Mature: 310
Protein sequence:
>311_residues MAEPQVVASRYALWKAAIKWPMYSVAVMPALLASGWLQSQGLDPRWGQLGLFLLAAVLLLGWENLSNDVFDDDTGVDTLG KPHSLVALTGRRDRIAWIAHSLLAGGLLLMALVALRSQPVVLLLVLICCGLGYLYQGPPFRLGYRGLGEPLCWLAFGPFA TAAALMALQPPTSLPAAVPWQVALSLGSGPALATTLVLFCSHFHQVEEDAAHGKRSPVVKLGTAKAAAVVPWLVAASLAL QWLPVLERQWPSTALLSVIGLPAAAQLIRLLREHHHQPERISGSKFLALRFQALSGLGLAIGLGIAPWLGR
Sequences:
>Translated_311_residues MAEPQVVASRYALWKAAIKWPMYSVAVMPALLASGWLQSQGLDPRWGQLGLFLLAAVLLLGWENLSNDVFDDDTGVDTLG KPHSLVALTGRRDRIAWIAHSLLAGGLLLMALVALRSQPVVLLLVLICCGLGYLYQGPPFRLGYRGLGEPLCWLAFGPFA TAAALMALQPPTSLPAAVPWQVALSLGSGPALATTLVLFCSHFHQVEEDAAHGKRSPVVKLGTAKAAAVVPWLVAASLAL QWLPVLERQWPSTALLSVIGLPAAAQLIRLLREHHHQPERISGSKFLALRFQALSGLGLAIGLGIAPWLGR >Mature_310_residues AEPQVVASRYALWKAAIKWPMYSVAVMPALLASGWLQSQGLDPRWGQLGLFLLAAVLLLGWENLSNDVFDDDTGVDTLGK PHSLVALTGRRDRIAWIAHSLLAGGLLLMALVALRSQPVVLLLVLICCGLGYLYQGPPFRLGYRGLGEPLCWLAFGPFAT AAALMALQPPTSLPAAVPWQVALSLGSGPALATTLVLFCSHFHQVEEDAAHGKRSPVVKLGTAKAAAVVPWLVAASLALQ WLPVLERQWPSTALLSVIGLPAAAQLIRLLREHHHQPERISGSKFLALRFQALSGLGLAIGLGIAPWLGR
Specific function: Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to dimethylmenaquinone (DMK). Attaches octaprenylpyrophosphate, a membrane-bound 40-carbon side chain to DHNA. The conversion of DHNA to DMK proceeds in three stages:the removal of the carboxyl group of DHNA
COG id: COG1575
COG function: function code H; 1,4-dihydroxy-2-naphthoate octaprenyltransferase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the menA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011937 - InterPro: IPR000537 [H]
Pfam domain/function: PF01040 UbiA [H]
EC number: =2.5.1.74 [H]
Molecular weight: Translated: 33289; Mature: 33158
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEPQVVASRYALWKAAIKWPMYSVAVMPALLASGWLQSQGLDPRWGQLGLFLLAAVLLL CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH GWENLSNDVFDDDTGVDTLGKPHSLVALTGRRDRIAWIAHSLLAGGLLLMALVALRSQPV HHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCH VLLLVLICCGLGYLYQGPPFRLGYRGLGEPLCWLAFGPFATAAALMALQPPTSLPAAVPW HHHHHHHHHCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH QVALSLGSGPALATTLVLFCSHFHQVEEDAAHGKRSPVVKLGTAKAAAVVPWLVAASLAL HHHEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHH QWLPVLERQWPSTALLSVIGLPAAAQLIRLLREHHHQPERISGSKFLALRFQALSGLGLA HHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHH IGLGIAPWLGR HHHCCHHCCCC >Mature Secondary Structure AEPQVVASRYALWKAAIKWPMYSVAVMPALLASGWLQSQGLDPRWGQLGLFLLAAVLLL CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH GWENLSNDVFDDDTGVDTLGKPHSLVALTGRRDRIAWIAHSLLAGGLLLMALVALRSQPV HHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCH VLLLVLICCGLGYLYQGPPFRLGYRGLGEPLCWLAFGPFATAAALMALQPPTSLPAAVPW HHHHHHHHHCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH QVALSLGSGPALATTLVLFCSHFHQVEEDAAHGKRSPVVKLGTAKAAAVVPWLVAASLAL HHHEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHH QWLPVLERQWPSTALLSVIGLPAAAQLIRLLREHHHQPERISGSKFLALRFQALSGLGLA HHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHH IGLGIAPWLGR HHHCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]