| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is menC [H]
Identifier: 148243353
GI number: 148243353
Start: 1960037
End: 1960993
Strand: Direct
Name: menC [H]
Synonym: SynRCC307_2254
Alternate gene names: 148243353
Gene position: 1960037-1960993 (Clockwise)
Preceding gene: 148243352
Following gene: 148243354
Centisome position: 88.09
GC content: 69.59
Gene sequence:
>957_bases ATGCAACTGCGCTGGCGCCCATACCGGTGGGCGCTGCAGCCGCCTTTGATCACCGCCTGCGGGCCCTGGAGCGAGCGGCG CGGCTGGCTGCTGCGGCTCGAGGACCCAGGCAGCGGTTCTGCGGGTTGGGGAGAAGCCGCACCCTTGCCGGCTGAGCACG CCCAGTGCGCCGATGCACTCGCGGCATTGCCTTCTGAGTGCAGCACCGAGCACCTGGAGCAAGCGCTCAGGGCACTGCCT GGGCCTGCGGCCTTTGCCATCGGACTGGCCCTAGCCGAGCTGGAAGGGCTCCAAGGCGGGCAATGGCTGCCGGCTCCCGC TTCAGCGGTGTTGCTGCCAGCCGGCGGTGAGGCCATCGCAGCCCTGAAGAGCGCGCTCCAGCGAGCCACAGGCGAGCCAG CGGAGTTCGCAGCCAAGTGGAAGGTGGGGGTGCTGGATCCAGACACCGAACTGCAGCTGCTGGAGCAACTTTTGGAGCAA CTTCCCAGCGGCGCCCAGCTCCGCCTTGATTCCAATGGCAGCTGGGACCGTGCCACCGCGGGGCGCTGGGCCATGCGTTT GAAGCACGAGGGCAAGCTGCAATGGCTGGAGCAGCCCTTGCCACCCAGCGACCATGCCGGCTTGCTCGCCCTGGGTCGCC GGCTGCCGGTGGCCCTCGATGAATCGCTCCGGCATCCCAGCGGCCTCCCCCCTGGGTGGAGCGGCTGGCTGGTGCACAAA CCAGCTCTCGAGGGTGATCCCCGGCCCCTGCTGCTGCAGCTCAAACAAGGGGCCGCCAAACAGATGGTGAGCAGTGCCTT GGAGAGCGGCATAGGAGCCCGGGCGGTGGCCCACATGGCGGCCCTGGCCAGCCGCGGCCCCACACCATGCGCCGCTGGAC TGGCCCCGGGCTGGGGTGCTTCTGGCGATCTCGCCAGCACGATCCCCCAGCAGGTGTGGGAGGCCGCCGGCTCATGA
Upstream 100 bases:
>100_bases AGCGGATTAGCGGCAGCAAGTTTTTGGCCTTGCGCTTTCAAGCCCTAAGCGGCCTCGGGCTCGCCATCGGCCTGGGCATT GCACCTTGGCTGGGACGTTG
Downstream 100 bases:
>100_bases ACGGCTGGGAGCTACGGGCCAGTGCGCTTGAAGAGCAAGCGGGCCGCGATGCGATGACCTGCTGCCAACGGTGGCCAGAA GGCAGCGGCGTGGTGATCGG
Product: O-succinylbenzoate synthase
Products: NA
Alternate protein names: OSB synthase; OSBS; 4-(2'-carboxyphenyl)-4-oxybutyric acid synthase; o-succinylbenzoic acid synthase [H]
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues MQLRWRPYRWALQPPLITACGPWSERRGWLLRLEDPGSGSAGWGEAAPLPAEHAQCADALAALPSECSTEHLEQALRALP GPAAFAIGLALAELEGLQGGQWLPAPASAVLLPAGGEAIAALKSALQRATGEPAEFAAKWKVGVLDPDTELQLLEQLLEQ LPSGAQLRLDSNGSWDRATAGRWAMRLKHEGKLQWLEQPLPPSDHAGLLALGRRLPVALDESLRHPSGLPPGWSGWLVHK PALEGDPRPLLLQLKQGAAKQMVSSALESGIGARAVAHMAALASRGPTPCAAGLAPGWGASGDLASTIPQQVWEAAGS
Sequences:
>Translated_318_residues MQLRWRPYRWALQPPLITACGPWSERRGWLLRLEDPGSGSAGWGEAAPLPAEHAQCADALAALPSECSTEHLEQALRALP GPAAFAIGLALAELEGLQGGQWLPAPASAVLLPAGGEAIAALKSALQRATGEPAEFAAKWKVGVLDPDTELQLLEQLLEQ LPSGAQLRLDSNGSWDRATAGRWAMRLKHEGKLQWLEQPLPPSDHAGLLALGRRLPVALDESLRHPSGLPPGWSGWLVHK PALEGDPRPLLLQLKQGAAKQMVSSALESGIGARAVAHMAALASRGPTPCAAGLAPGWGASGDLASTIPQQVWEAAGS >Mature_318_residues MQLRWRPYRWALQPPLITACGPWSERRGWLLRLEDPGSGSAGWGEAAPLPAEHAQCADALAALPSECSTEHLEQALRALP GPAAFAIGLALAELEGLQGGQWLPAPASAVLLPAGGEAIAALKSALQRATGEPAEFAAKWKVGVLDPDTELQLLEQLLEQ LPSGAQLRLDSNGSWDRATAGRWAMRLKHEGKLQWLEQPLPPSDHAGLLALGRRLPVALDESLRHPSGLPPGWSGWLVHK PALEGDPRPLLLQLKQGAAKQMVSSALESGIGARAVAHMAALASRGPTPCAAGLAPGWGASGDLASTIPQQVWEAAGS
Specific function: Converts SHCHC to OSB [H]
COG id: COG4948
COG function: function code MR; L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mandelate racemase/muconate lactonizing enzyme family. MenC type 1 subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013342 - InterPro: IPR001354 - InterPro: IPR010196 [H]
Pfam domain/function: PF01188 MR_MLE [H]
EC number: =4.2.1.113 [H]
Molecular weight: Translated: 33457; Mature: 33457
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLRWRPYRWALQPPLITACGPWSERRGWLLRLEDPGSGSAGWGEAAPLPAEHAQCADAL CCCCCCCCCEECCCCEEEECCCCHHCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHH AALPSECSTEHLEQALRALPGPAAFAIGLALAELEGLQGGQWLPAPASAVLLPAGGEAIA HHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCHHHH ALKSALQRATGEPAEFAAKWKVGVLDPDTELQLLEQLLEQLPSGAQLRLDSNGSWDRATA HHHHHHHHHCCCCHHHHHHEEEECCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHH GRWAMRLKHEGKLQWLEQPLPPSDHAGLLALGRRLPVALDESLRHPSGLPPGWSGWLVHK HHHHHHHCCCCCHHHHHCCCCCCCCCHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEC PALEGDPRPLLLQLKQGAAKQMVSSALESGIGARAVAHMAALASRGPTPCAAGLAPGWGA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC SGDLASTIPQQVWEAAGS CCCHHHHHHHHHHHHCCC >Mature Secondary Structure MQLRWRPYRWALQPPLITACGPWSERRGWLLRLEDPGSGSAGWGEAAPLPAEHAQCADAL CCCCCCCCCEECCCCEEEECCCCHHCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHH AALPSECSTEHLEQALRALPGPAAFAIGLALAELEGLQGGQWLPAPASAVLLPAGGEAIA HHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCHHHH ALKSALQRATGEPAEFAAKWKVGVLDPDTELQLLEQLLEQLPSGAQLRLDSNGSWDRATA HHHHHHHHHCCCCHHHHHHEEEECCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHH GRWAMRLKHEGKLQWLEQPLPPSDHAGLLALGRRLPVALDESLRHPSGLPPGWSGWLVHK HHHHHHHCCCCCHHHHHCCCCCCCCCHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEC PALEGDPRPLLLQLKQGAAKQMVSSALESGIGARAVAHMAALASRGPTPCAAGLAPGWGA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC SGDLASTIPQQVWEAAGS CCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]