| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148243310
Identifier: 148243310
GI number: 148243310
Start: 1917006
End: 1917824
Strand: Direct
Name: 148243310
Synonym: SynRCC307_2211
Alternate gene names: NA
Gene position: 1917006-1917824 (Clockwise)
Preceding gene: 148243307
Following gene: 148243311
Centisome position: 86.16
GC content: 64.47
Gene sequence:
>819_bases ATGTGGCCAGTCATGACAGGGTCTGTGCTGGCCGTTCTGATCGGATCCCTCGCCCTTGTCGCCGGGCTGCTGCTGATGCT GCTGCCCCTGGTGGCGAGCGAGCTGGCCAGGCCACGCGACAGCTTTTGGGCTGCTGTGGTGTTGCTTCTGGGCCTGGTGC TGGTGACGGCATCCGACAGGCTCACCGGCGCTCCGATGCTGGGTGTGCTCTGCGGGGGCTTGTTAATCGGCCGTCTGGGA TCAGAAGTGGGGCAGCAGCGCTGGGGGGCTCTTGAGCCGGCCCAGCAGCAGCGCTTCAGCGAAACGAGCTATTGGACGCT GCAATTGGAGCAGCTGCGTGGTGCCGCGGCCAAGCTCCTCGCCGCTGGCGGGATCGTGGCGAGCTGGTTACAAGAGCGGC TCAAGAAACCCGAAGTCAACAAACGCTGGGTGCGCGCTGATGCCACTGGCGAAACCACACCCACCGAAGCTGAGCCAACG ACCACAGAGCCCAGTGCCGAAGTCGTTCCCGAGCCTGAAGCTGAGCCAGAACCCGAAGCAGAGCTGGAGACCAAGCCTGT TCCCGAACCAGCCGCCGAGCTCACGGTGGAGGTTGAAGCCACCACAACAGTCGAGGCTGAAACGGAATCAGAGGCAGAGG CAGACATTGAGCCCGAAGCCCTCGCTGCCAGCTCAGACGCAGACCCCAGCAGCGACGAGCTGCCCACCGTGGAGGCCGAA GTACTGGATCCAGCGCCCCAGGTTGAGCAACCGTTGGCCGCTGTGATTCAGTCGCTTGACGAGGTCGACGCCCTCCTCGC GGACGGCCGCCACGGATAA
Upstream 100 bases:
>100_bases GGGGGACTTGAACCCCCACGACCGAGGCCACTGGTACCTAAAACCAGCGCGTCTACCAATTCCGCCAGGTGGGCAGACGA CAACTGTAGGCAGCGCTTGA
Downstream 100 bases:
>100_bases TCGCCAGCAGACGTCGAACCCTGGTGAGCGCGAGCGAGACCTCTTACAAAGACACCCTCAATCTGCTCAAAACGGATTTC TCGATGCGCGCCAACTCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MWPVMTGSVLAVLIGSLALVAGLLLMLLPLVASELARPRDSFWAAVVLLLGLVLVTASDRLTGAPMLGVLCGGLLIGRLG SEVGQQRWGALEPAQQQRFSETSYWTLQLEQLRGAAAKLLAAGGIVASWLQERLKKPEVNKRWVRADATGETTPTEAEPT TTEPSAEVVPEPEAEPEPEAELETKPVPEPAAELTVEVEATTTVEAETESEAEADIEPEALAASSDADPSSDELPTVEAE VLDPAPQVEQPLAAVIQSLDEVDALLADGRHG
Sequences:
>Translated_272_residues MWPVMTGSVLAVLIGSLALVAGLLLMLLPLVASELARPRDSFWAAVVLLLGLVLVTASDRLTGAPMLGVLCGGLLIGRLG SEVGQQRWGALEPAQQQRFSETSYWTLQLEQLRGAAAKLLAAGGIVASWLQERLKKPEVNKRWVRADATGETTPTEAEPT TTEPSAEVVPEPEAEPEPEAELETKPVPEPAAELTVEVEATTTVEAETESEAEADIEPEALAASSDADPSSDELPTVEAE VLDPAPQVEQPLAAVIQSLDEVDALLADGRHG >Mature_272_residues MWPVMTGSVLAVLIGSLALVAGLLLMLLPLVASELARPRDSFWAAVVLLLGLVLVTASDRLTGAPMLGVLCGGLLIGRLG SEVGQQRWGALEPAQQQRFSETSYWTLQLEQLRGAAAKLLAAGGIVASWLQERLKKPEVNKRWVRADATGETTPTEAEPT TTEPSAEVVPEPEAEPEPEAELETKPVPEPAAELTVEVEATTTVEAETESEAEADIEPEALAASSDADPSSDELPTVEAE VLDPAPQVEQPLAAVIQSLDEVDALLADGRHG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28733; Mature: 28733
Theoretical pI: Translated: 3.83; Mature: 3.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWPVMTGSVLAVLIGSLALVAGLLLMLLPLVASELARPRDSFWAAVVLLLGLVLVTASDR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC LTGAPMLGVLCGGLLIGRLGSEVGQQRWGALEPAQQQRFSETSYWTLQLEQLRGAAAKLL CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEEEEHHHHHHHHHHHH AAGGIVASWLQERLKKPEVNKRWVRADATGETTPTEAEPTTTEPSAEVVPEPEAEPEPEA HHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ELETKPVPEPAAELTVEVEATTTVEAETESEAEADIEPEALAASSDADPSSDELPTVEAE CCCCCCCCCCHHHEEEEEEEEEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHH VLDPAPQVEQPLAAVIQSLDEVDALLADGRHG HCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MWPVMTGSVLAVLIGSLALVAGLLLMLLPLVASELARPRDSFWAAVVLLLGLVLVTASDR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC LTGAPMLGVLCGGLLIGRLGSEVGQQRWGALEPAQQQRFSETSYWTLQLEQLRGAAAKLL CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEEEEHHHHHHHHHHHH AAGGIVASWLQERLKKPEVNKRWVRADATGETTPTEAEPTTTEPSAEVVPEPEAEPEPEA HHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ELETKPVPEPAAELTVEVEATTTVEAETESEAEADIEPEALAASSDADPSSDELPTVEAE CCCCCCCCCCHHHEEEEEEEEEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHH VLDPAPQVEQPLAAVIQSLDEVDALLADGRHG HCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA