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The map label for this gene is gatC

Identifier: 148243307

GI number: 148243307

Start: 1914853

End: 1915146

Strand: Direct

Name: gatC

Synonym: SynRCC307_2208

Alternate gene names: 148243307

Gene position: 1914853-1915146 (Clockwise)

Preceding gene: 148243306

Following gene: 148243310

Centisome position: 86.06

GC content: 61.9

Gene sequence:

>294_bases
ATGAGCCACATCTCCGCCGACGACGTGCGCAAGGTGGCCCAACTGGCGCGGCTTGATCTGCCAGACGACAGCATCGCCAC
CTTCACCCCGCAGCTCGAGCGCATTCTTGATTTTGTGGCTCAGCTCGAGGCCATCGACACCGAGGGCCTGCCGCCCACAA
CGCGAGCAGTGGAAGTGGTCAACGTCACCCGGGAAGACGGGGTTGAACCCACGCCAGTGCGCGAAGAACTGCTCAACCAA
GCCCCTCAGCGGGAAGGTGATTTCTTCCGGGTGCCGCGAATCCTGAACAACTAA

Upstream 100 bases:

>100_bases
ACCCCTATCTGGCCAAGGCGGATCACGGCGAACGCTTCTTGGACCTGGCTGCCACGGCGCTCTGCAAGGATCTGGAGCAG
TTTCTGGCCAGCGACGCCCC

Downstream 100 bases:

>100_bases
CTCAGCGCGGGCCGACGCTGGTGCGGTGCAGCAGACCGATCACGCGCCGGCGGTTCTGAAAACCAGGCACAAAGTGGGCG
ACCCAGCGCAGTTTGGAGCG

Product: aspartyl/glutamyl-tRNA amidotransferase subunit C

Products: NA

Alternate protein names: Asp/Glu-ADT subunit C

Number of amino acids: Translated: 97; Mature: 96

Protein sequence:

>97_residues
MSHISADDVRKVAQLARLDLPDDSIATFTPQLERILDFVAQLEAIDTEGLPPTTRAVEVVNVTREDGVEPTPVREELLNQ
APQREGDFFRVPRILNN

Sequences:

>Translated_97_residues
MSHISADDVRKVAQLARLDLPDDSIATFTPQLERILDFVAQLEAIDTEGLPPTTRAVEVVNVTREDGVEPTPVREELLNQ
APQREGDFFRVPRILNN
>Mature_96_residues
SHISADDVRKVAQLARLDLPDDSIATFTPQLERILDFVAQLEAIDTEGLPPTTRAVEVVNVTREDGVEPTPVREELLNQA
PQREGDFFRVPRILNN

Specific function: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction take

COG id: COG0721

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gatC family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GATC_SYNR3 (A5GW52)

Other databases:

- EMBL:   CT978603
- RefSeq:   YP_001228464.1
- ProteinModelPortal:   A5GW52
- SMR:   A5GW52
- STRING:   A5GW52
- GeneID:   5156623
- GenomeReviews:   CT978603_GR
- KEGG:   syr:SynRCC307_2208
- eggNOG:   COG0721
- HOGENOM:   HBG586403
- OMA:   PTSHAVP
- ProtClustDB:   PRK00034
- GO:   GO:0006412
- HAMAP:   MF_00122
- InterPro:   IPR003837
- TIGRFAMs:   TIGR00135

Pfam domain/function: PF02686 Glu-tRNAGln

EC number: 6.3.5.-

Molecular weight: Translated: 10878; Mature: 10747

Theoretical pI: Translated: 4.22; Mature: 4.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHISADDVRKVAQLARLDLPDDSIATFTPQLERILDFVAQLEAIDTEGLPPTTRAVEVV
CCCCCHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
NVTREDGVEPTPVREELLNQAPQREGDFFRVPRILNN
HHHHHCCCCCCCHHHHHHHHCCCCCCCEEECCHHHCC
>Mature Secondary Structure 
SHISADDVRKVAQLARLDLPDDSIATFTPQLERILDFVAQLEAIDTEGLPPTTRAVEVV
CCCCHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
NVTREDGVEPTPVREELLNQAPQREGDFFRVPRILNN
HHHHHCCCCCCCHHHHHHHHCCCCCCCEEECCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA