| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148243298
Identifier: 148243298
GI number: 148243298
Start: 1909026
End: 1909409
Strand: Direct
Name: 148243298
Synonym: SynRCC307_2199
Alternate gene names: NA
Gene position: 1909026-1909409 (Clockwise)
Preceding gene: 148243295
Following gene: 148243299
Centisome position: 85.8
GC content: 64.06
Gene sequence:
>384_bases ATGATGGCCTGGCCGCTGCTCTTGGCATCCCTGCCCCTGCTGCAAACCGCGCAGGACAGGATCGTGTTGCTGGATGTTGG CCCGCTGCAGCCGCTGCCGGCTTGGGCTCTGACGAGTGAGCAATCAACAGAGGATCGCCCGGCCACCATGCGTGTGGCTT GGACCGAACGCCAGCAACTCGATGGCCCCGGCCGCTGGGCTGTGGCCTATGGAATCGACTGCGAGGGACGGCGCATCCGC CGCTTGAGCGCGCCGCTGGATCTGAATGCAGGCAGCTTTGCCAAACAAGCTGCCATCACTGGTGAAGCGGGTTTTTGGTA CCCCGAACGGCCCTTCACGCTGCTGAGCCGCCTGTTGCAACAGGCGTGTGCAACCCAGCGATGA
Upstream 100 bases:
>100_bases TAGCTTCGAATCAAGTCCCCAAGGGGAATTAGCTCAGCTGGTAGAGCGCTGCGATCGCACCGCAGAGGTCAGGGGTTCGA ATCCCCTATTCTCCATCGCC
Downstream 100 bases:
>100_bases GGAGCGGGAGTTTATCCCTCAGCACCTCAATGGGGTACAAAGGGTCACCAACCTCAATGGTGAGCGATGTCGCAGTCCAA GCGTGAACAGGTCGTCAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MMAWPLLLASLPLLQTAQDRIVLLDVGPLQPLPAWALTSEQSTEDRPATMRVAWTERQQLDGPGRWAVAYGIDCEGRRIR RLSAPLDLNAGSFAKQAAITGEAGFWYPERPFTLLSRLLQQACATQR
Sequences:
>Translated_127_residues MMAWPLLLASLPLLQTAQDRIVLLDVGPLQPLPAWALTSEQSTEDRPATMRVAWTERQQLDGPGRWAVAYGIDCEGRRIR RLSAPLDLNAGSFAKQAAITGEAGFWYPERPFTLLSRLLQQACATQR >Mature_127_residues MMAWPLLLASLPLLQTAQDRIVLLDVGPLQPLPAWALTSEQSTEDRPATMRVAWTERQQLDGPGRWAVAYGIDCEGRRIR RLSAPLDLNAGSFAKQAAITGEAGFWYPERPFTLLSRLLQQACATQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14146; Mature: 14146
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMAWPLLLASLPLLQTAQDRIVLLDVGPLQPLPAWALTSEQSTEDRPATMRVAWTERQQL CCCHHHHHHHCCHHCCCCCCEEEEECCCCCCCCCEEECCCCCCCCCCCEEEEEECCHHHC DGPGRWAVAYGIDCEGRRIRRLSAPLDLNAGSFAKQAAITGEAGFWYPERPFTLLSRLLQ CCCCCEEEEECCCCCCCEEEEECCCCCCCCCCCHHHHEEECCCCCCCCCCHHHHHHHHHH QACATQR HHHCCCC >Mature Secondary Structure MMAWPLLLASLPLLQTAQDRIVLLDVGPLQPLPAWALTSEQSTEDRPATMRVAWTERQQL CCCHHHHHHHCCHHCCCCCCEEEEECCCCCCCCCEEECCCCCCCCCCCEEEEEECCHHHC DGPGRWAVAYGIDCEGRRIRRLSAPLDLNAGSFAKQAAITGEAGFWYPERPFTLLSRLLQ CCCCCEEEEECCCCCCCEEEEECCCCCCCCCCCHHHHEEECCCCCCCCCCHHHHHHHHHH QACATQR HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA