Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

Click here to switch to the map view.

The map label for this gene is 148243299

Identifier: 148243299

GI number: 148243299

Start: 1909476

End: 1909676

Strand: Direct

Name: 148243299

Synonym: SynRCC307_2200

Alternate gene names: NA

Gene position: 1909476-1909676 (Clockwise)

Preceding gene: 148243298

Following gene: 148243301

Centisome position: 85.82

GC content: 57.21

Gene sequence:

>201_bases
ATGTCGCAGTCCAAGCGTGAACAGGTCGTCAGCCACCTCCGTTACATCCGCCAAGAACTGCGCGAAATGCATCAAGGCGT
TATGGACGACGGCCTGCTGCCCGAAAGCGGTGAAGTCCGTGGTGTGATGGCCCAAATGGAAGCGCTGCTGGAACTGCTGG
AAGGCAAAGGCAGCCGCAAGGCCAAAGAAGTCAAATCCTGA

Upstream 100 bases:

>100_bases
CCTGTTGCAACAGGCGTGTGCAACCCAGCGATGAGGAGCGGGAGTTTATCCCTCAGCACCTCAATGGGGTACAAAGGGTC
ACCAACCTCAATGGTGAGCG

Downstream 100 bases:

>100_bases
GCTGGCACCACCTGTAGTGGTTGAGGCAACCACAAGGACCAGATGTTGTGTATAAAGGGCCTGGCGGAGCACCGGGCCAG
GTGATGGGGATCCCAGGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 66; Mature: 65

Protein sequence:

>66_residues
MSQSKREQVVSHLRYIRQELREMHQGVMDDGLLPESGEVRGVMAQMEALLELLEGKGSRKAKEVKS

Sequences:

>Translated_66_residues
MSQSKREQVVSHLRYIRQELREMHQGVMDDGLLPESGEVRGVMAQMEALLELLEGKGSRKAKEVKS
>Mature_65_residues
SQSKREQVVSHLRYIRQELREMHQGVMDDGLLPESGEVRGVMAQMEALLELLEGKGSRKAKEVKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7511; Mature: 7380

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.6 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQSKREQVVSHLRYIRQELREMHQGVMDDGLLPESGEVRGVMAQMEALLELLEGKGSRK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCH
AKEVKS
HHHCCC
>Mature Secondary Structure 
SQSKREQVVSHLRYIRQELREMHQGVMDDGLLPESGEVRGVMAQMEALLELLEGKGSRK
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCH
AKEVKS
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA