| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is ubiE [H]
Identifier: 148243272
GI number: 148243272
Start: 1882194
End: 1883138
Strand: Direct
Name: ubiE [H]
Synonym: SynRCC307_2173
Alternate gene names: 148243272
Gene position: 1882194-1883138 (Clockwise)
Preceding gene: 148243271
Following gene: 148243274
Centisome position: 84.6
GC content: 61.16
Gene sequence:
>945_bases ATGAGCCTGCTTTTCACAGGGCTGGTGCTCCTCACTGGCTTGTTGGGCGTGGGACTAGTGGTTTGGTATGTGCTGCCTCG GCGCTTTCGCGGCAGCGAAAGCGTGGCCTCTGCCTACGACAACTGGACCCAAGATCAATTGCTGGAAAGCCTCTGGGGAG AGCACATCCACCTCGGCTACTACGGCGATCCTCCGCAAGGGCGGGATTTTCGCGCTGCCAAGCAAGATTTCGTGGATGCC CTCGCCCATTGGGGCGGCCTTGAAGGTTTACCCGCAGGCACAAAAGTGGTGGATGTGGGCTGCGGCATCGGCGGCAGCAG CCGTCGCTTGGCCAGCCGCTATGGCTTTGATGTGCTGGGCGTCAGCATCAGCCCTGGGCAGGTGGAGCGGGCCCGGCAGC TCACAGACCCCAATCTGTCCTGCCGCTTTGCGGTGATGGATGCCCTCAAGCTCGATCTACCCGATGCCTGCATGGATGTG GTGTGGACCGTGGAGTGCGCTCCCCACATCGCGGACAAGCAAGGCTTTGCCAATGAACTGCTGCGGGTGCTCAAACCTGG CGGACAGCTGGTCGCCGCTGATTGGAACCAGCGCGATCACCTGGGGCGCCCTTTTAACCAAGCTGAAAACTGGGTTCTCG AGCAGCTGCGGGTGCAATGGGCCCACCCCGCCTTCTCAAGCATCAACTCCTTCCGCCGCAATCTGGAACAAAGCGGCGTC CCCCTTGAGCAGTTGCAAACAGGGGATTGGAGTCGCCAAACCCTGCCCTCCTGGTGGGCCTCCATCGAAGAGGGCATTCG CCGTCCGATGGCGGTGCTCAGCCTTGGACCAGGCGCTGTGTTTAAAGGGCTCAGGGAAGTGCCCACCCTGCTGCTGATGC AATGGGCCTTCAGCTGCGGACTGATGCAGTTCGGCCTCTTTAAGGCGAAACGGTGTCATCCGTAA
Upstream 100 bases:
>100_bases CTGGCGAAAGGCTGCAGTTGGAATTTGAGCTTTTGGACCACACCCGCCGCCAACTCGCTGCCCGCACGGTGCTCAAAGAC ACCTTCAAGGATCTGGAGGG
Downstream 100 bases:
>100_bases TCGGGTAGGAGCCAAAACTGCTCAGCCGTTCACACAACGGTTGCAGGGCAGCGCACACTTCATCCACAGGCGGACCAGCC GCTTCGAGATCCACAAAGAA
Product: sterol-C-methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 314; Mature: 313
Protein sequence:
>314_residues MSLLFTGLVLLTGLLGVGLVVWYVLPRRFRGSESVASAYDNWTQDQLLESLWGEHIHLGYYGDPPQGRDFRAAKQDFVDA LAHWGGLEGLPAGTKVVDVGCGIGGSSRRLASRYGFDVLGVSISPGQVERARQLTDPNLSCRFAVMDALKLDLPDACMDV VWTVECAPHIADKQGFANELLRVLKPGGQLVAADWNQRDHLGRPFNQAENWVLEQLRVQWAHPAFSSINSFRRNLEQSGV PLEQLQTGDWSRQTLPSWWASIEEGIRRPMAVLSLGPGAVFKGLREVPTLLLMQWAFSCGLMQFGLFKAKRCHP
Sequences:
>Translated_314_residues MSLLFTGLVLLTGLLGVGLVVWYVLPRRFRGSESVASAYDNWTQDQLLESLWGEHIHLGYYGDPPQGRDFRAAKQDFVDA LAHWGGLEGLPAGTKVVDVGCGIGGSSRRLASRYGFDVLGVSISPGQVERARQLTDPNLSCRFAVMDALKLDLPDACMDV VWTVECAPHIADKQGFANELLRVLKPGGQLVAADWNQRDHLGRPFNQAENWVLEQLRVQWAHPAFSSINSFRRNLEQSGV PLEQLQTGDWSRQTLPSWWASIEEGIRRPMAVLSLGPGAVFKGLREVPTLLLMQWAFSCGLMQFGLFKAKRCHP >Mature_313_residues SLLFTGLVLLTGLLGVGLVVWYVLPRRFRGSESVASAYDNWTQDQLLESLWGEHIHLGYYGDPPQGRDFRAAKQDFVDAL AHWGGLEGLPAGTKVVDVGCGIGGSSRRLASRYGFDVLGVSISPGQVERARQLTDPNLSCRFAVMDALKLDLPDACMDVV WTVECAPHIADKQGFANELLRVLKPGGQLVAADWNQRDHLGRPFNQAENWVLEQLRVQWAHPAFSSINSFRRNLEQSGVP LEQLQTGDWSRQTLPSWWASIEEGIRRPMAVLSLGPGAVFKGLREVPTLLLMQWAFSCGLMQFGLFKAKRCHP
Specific function: Methyltransferase required for the conversion of dimethylmenaquinone (DMKH2) to menaquinone (MKH2) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. UbiE family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6323635, Length=176, Percent_Identity=29.5454545454545, Blast_Score=74, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004033 [H]
Pfam domain/function: PF01209 Ubie_methyltran [H]
EC number: NA
Molecular weight: Translated: 34868; Mature: 34737
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLLFTGLVLLTGLLGVGLVVWYVLPRRFRGSESVASAYDNWTQDQLLESLWGEHIHLGY CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHCCCEEEEEE YGDPPQGRDFRAAKQDFVDALAHWGGLEGLPAGTKVVDVGCGIGGSSRRLASRYGFDVLG ECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHHHHHCCCEEEE VSISPGQVERARQLTDPNLSCRFAVMDALKLDLPDACMDVVWTVECAPHIADKQGFANEL EECCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHCCHHHHH LRVLKPGGQLVAADWNQRDHLGRPFNQAENWVLEQLRVQWAHPAFSSINSFRRNLEQSGV HHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC PLEQLQTGDWSRQTLPSWWASIEEGIRRPMAVLSLGPGAVFKGLREVPTLLLMQWAFSCG CHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH LMQFGLFKAKRCHP HHHHHHHHHCCCCC >Mature Secondary Structure SLLFTGLVLLTGLLGVGLVVWYVLPRRFRGSESVASAYDNWTQDQLLESLWGEHIHLGY HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHCCCEEEEEE YGDPPQGRDFRAAKQDFVDALAHWGGLEGLPAGTKVVDVGCGIGGSSRRLASRYGFDVLG ECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHHHHHCCCEEEE VSISPGQVERARQLTDPNLSCRFAVMDALKLDLPDACMDVVWTVECAPHIADKQGFANEL EECCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHCCHHHHH LRVLKPGGQLVAADWNQRDHLGRPFNQAENWVLEQLRVQWAHPAFSSINSFRRNLEQSGV HHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC PLEQLQTGDWSRQTLPSWWASIEEGIRRPMAVLSLGPGAVFKGLREVPTLLLMQWAFSCG CHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH LMQFGLFKAKRCHP HHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12606174 [H]